| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909981
Identifier: 75909981
GI number: 75909981
Start: 4703164
End: 4703637
Strand: Direct
Name: 75909981
Synonym: Ava_3777
Alternate gene names: NA
Gene position: 4703164-4703637 (Clockwise)
Preceding gene: 75909980
Following gene: 75909982
Centisome position: 73.88
GC content: 36.08
Gene sequence:
>474_bases TTGGAAAGTCAGCAGAAATTTTTAAGCTTTAATTTGGGAATCAAAGATACAGCAGTGATTTCCTTACAGCATATTACAGA AGTTTTACAAGTATCTTTGGTTGATATATGCGGCGTACCCCAAATGCCAGCTTGTGTTATGGGTGTATACAACTGGCGCG GTGAAATGTTGTGGTTAGTAGATTTAGAAGAAATGCTAGGTTACCCACCACTATCACATACAAGCAACTTTCTGGCAAAA ATGATGGCAATTGTGTTGGAGGATGATGGTAAGCATTTAGGGATTATAGTCCGGCAAATGATGGATATTGAGTTTCTGGA TAATAATCAAATGAAAGCACCTGCTGCTGAATTATTTTCATCATCCATTACTGATTTTTTGCAAGGATACTTCATTAATC ATGATGAGAAAATGATGTTCAATTTAGATGCTAGTGCTATTATTCATTCTCCTATGTGGGTTACTCATAACTAA
Upstream 100 bases:
>100_bases ACCTATCAATCAGGAAGAGTTAACCTTAACTCTCAAGAGACTTTCTAGATAAAATTTTCTAGAAATTAACCAAATACTAA ATAAATTAAAGGGTGAAAAT
Downstream 100 bases:
>100_bases TCATCAATCAAGCGCTATTGATTATAGTTTTTAAAACCTATAATCACCACAATAACTTAGATTTGCTAACAATTACATAT CTATTAATACAAGTGTAACA
Product: CheW protein
Products: NA
Alternate protein names: CheW-Like Protein
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MESQQKFLSFNLGIKDTAVISLQHITEVLQVSLVDICGVPQMPACVMGVYNWRGEMLWLVDLEEMLGYPPLSHTSNFLAK MMAIVLEDDGKHLGIIVRQMMDIEFLDNNQMKAPAAELFSSSITDFLQGYFINHDEKMMFNLDASAIIHSPMWVTHN
Sequences:
>Translated_157_residues MESQQKFLSFNLGIKDTAVISLQHITEVLQVSLVDICGVPQMPACVMGVYNWRGEMLWLVDLEEMLGYPPLSHTSNFLAK MMAIVLEDDGKHLGIIVRQMMDIEFLDNNQMKAPAAELFSSSITDFLQGYFINHDEKMMFNLDASAIIHSPMWVTHN >Mature_157_residues MESQQKFLSFNLGIKDTAVISLQHITEVLQVSLVDICGVPQMPACVMGVYNWRGEMLWLVDLEEMLGYPPLSHTSNFLAK MMAIVLEDDGKHLGIIVRQMMDIEFLDNNQMKAPAAELFSSSITDFLQGYFINHDEKMMFNLDASAIIHSPMWVTHN
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17825; Mature: 17825
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESQQKFLSFNLGIKDTAVISLQHITEVLQVSLVDICGVPQMPACVMGVYNWRGEMLWLV CCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEE DLEEMLGYPPLSHTSNFLAKMMAIVLEDDGKHLGIIVRQMMDIEFLDNNQMKAPAAELFS EHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCHHHHHH SSITDFLQGYFINHDEKMMFNLDASAIIHSPMWVTHN HHHHHHHHHHCCCCCCEEEEECCHHHHCCCCEEEECC >Mature Secondary Structure MESQQKFLSFNLGIKDTAVISLQHITEVLQVSLVDICGVPQMPACVMGVYNWRGEMLWLV CCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEE DLEEMLGYPPLSHTSNFLAKMMAIVLEDDGKHLGIIVRQMMDIEFLDNNQMKAPAAELFS EHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCHHHHHH SSITDFLQGYFINHDEKMMFNLDASAIIHSPMWVTHN HHHHHHHHHHCCCCCCEEEEECCHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA