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The map label for this gene is patA [H]

Identifier: 75909979

GI number: 75909979

Start: 4701292

End: 4702476

Strand: Direct

Name: patA [H]

Synonym: Ava_3775

Alternate gene names: 75909979

Gene position: 4701292-4702476 (Clockwise)

Preceding gene: 75909976

Following gene: 75909980

Centisome position: 73.85

GC content: 39.66

Gene sequence:

>1185_bases
ATGGTATCAAATAACGTACTTAATGAATTTAAAACTTGTACCCAACTCCAATATAATGGACAGTTAATTATTAATAGTCC
TAAAGGGCAGCAATGGACTTTCTATTATCGCTTGGGTAGGATAGTTTGGGCAACAGGAGGAACTCATCCTTTTCGTCGCT
GGCGTAGACTCATGGCGCAACATTGCCCACAGATTGATGTTGATAAAATGCAGCTGCGCCCGCAAGATATCTCGATGAGT
TACTGGGATTATCGCCTATTGGAAATTTTGTATAAAAAGCAGAAGATTCAACGGGAGCAAATTCATAACATTGTTGATAA
TACCATCAACGAACTTTTGTTTGAATTAGCCCAACAGAGTAATTTCGTCTCTATTAGTTGCGAACGTAACCAAAAAGTTA
TCCTAGAGACACCAATGAGTTTCACGAGTGCAGATGTGTCAATGAAACAGATGCTAGAATCGTGGAAAAATTGGTCAGAA
GCAGGCTTGGTAAATATTTGTCCTGATTTAGCGCCAGTAATTTGCAGACCAGAACAACTCCAGCAACAGGTAAGTCCATC
TGTCTATAAAAATTTTGTCACTTTAATTAATGGCAAATCCACATTGCGAGATTTGGCTGCCAAAATGAAGCAGAATGTTT
TACCAGTCTCGCGTTCTTTGCTACCATACGTCCTTAAAGGAATCATCGAATTGGTGGAGTTGCCTGATTTACCTTTAGCT
GTTGTAGAAACTCTCAATAAGGCGACCTCTGCACAACCTACAAAATCGAAGGTTCCGGTGATAGCCTGTGTAGATGATAG
TCCACAGGTCTGTAAACTTCTGGAAGATATTATCACAGCCAATGGGATGAAATTCATCAAAATTCAAGATGCTGTACAGG
CATTACCACTGCTGATTCAAGAGAAACCAGACTTGATCTTTTTAGATTTAATCATGCCAGTGGCTAGTGGTTATGAAATA
TGTACGCAATTGCGGCGAATTCCTACTTTTGCTAACACACCAGTAATTATCTTAACAGGTAATGATGGTCTTTTAGATCG
AGTACGTGCTAAGGTCGTCGGTTCTACCGACTTTCTTACAAAACCAGTAGCAGCAGATAGGGTGATGAGTGTAGTCCGTA
AATACTTACCTATGCAAACTACATCTCCTGCAAAAACCGGATCTCATTTAGAATTTTGCCAATAA

Upstream 100 bases:

>100_bases
TGACAAATAAGTTTTGTCAAAAATAAGTAGATTACTAGTTGGGGTTTTGAGAAGGCTGATTTTTAAATCACAGGTATCAA
GCACAATTTCCCACGGTCTG

Downstream 100 bases:

>100_bases
TCAGTGTCCATAATTGATGAATAAATCGAATATTTTGATGCTCTAGAGTAATTTACTTTTCAGGATAAATTATTGTTAAA
TCTGGTACATAATTATTTGC

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: PAT-1 [H]

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MVSNNVLNEFKTCTQLQYNGQLIINSPKGQQWTFYYRLGRIVWATGGTHPFRRWRRLMAQHCPQIDVDKMQLRPQDISMS
YWDYRLLEILYKKQKIQREQIHNIVDNTINELLFELAQQSNFVSISCERNQKVILETPMSFTSADVSMKQMLESWKNWSE
AGLVNICPDLAPVICRPEQLQQQVSPSVYKNFVTLINGKSTLRDLAAKMKQNVLPVSRSLLPYVLKGIIELVELPDLPLA
VVETLNKATSAQPTKSKVPVIACVDDSPQVCKLLEDIITANGMKFIKIQDAVQALPLLIQEKPDLIFLDLIMPVASGYEI
CTQLRRIPTFANTPVIILTGNDGLLDRVRAKVVGSTDFLTKPVAADRVMSVVRKYLPMQTTSPAKTGSHLEFCQ

Sequences:

>Translated_394_residues
MVSNNVLNEFKTCTQLQYNGQLIINSPKGQQWTFYYRLGRIVWATGGTHPFRRWRRLMAQHCPQIDVDKMQLRPQDISMS
YWDYRLLEILYKKQKIQREQIHNIVDNTINELLFELAQQSNFVSISCERNQKVILETPMSFTSADVSMKQMLESWKNWSE
AGLVNICPDLAPVICRPEQLQQQVSPSVYKNFVTLINGKSTLRDLAAKMKQNVLPVSRSLLPYVLKGIIELVELPDLPLA
VVETLNKATSAQPTKSKVPVIACVDDSPQVCKLLEDIITANGMKFIKIQDAVQALPLLIQEKPDLIFLDLIMPVASGYEI
CTQLRRIPTFANTPVIILTGNDGLLDRVRAKVVGSTDFLTKPVAADRVMSVVRKYLPMQTTSPAKTGSHLEFCQ
>Mature_394_residues
MVSNNVLNEFKTCTQLQYNGQLIINSPKGQQWTFYYRLGRIVWATGGTHPFRRWRRLMAQHCPQIDVDKMQLRPQDISMS
YWDYRLLEILYKKQKIQREQIHNIVDNTINELLFELAQQSNFVSISCERNQKVILETPMSFTSADVSMKQMLESWKNWSE
AGLVNICPDLAPVICRPEQLQQQVSPSVYKNFVTLINGKSTLRDLAAKMKQNVLPVSRSLLPYVLKGIIELVELPDLPLA
VVETLNKATSAQPTKSKVPVIACVDDSPQVCKLLEDIITANGMKFIKIQDAVQALPLLIQEKPDLIFLDLIMPVASGYEI
CTQLRRIPTFANTPVIILTGNDGLLDRVRAKVVGSTDFLTKPVAADRVMSVVRKYLPMQTTSPAKTGSHLEFCQ

Specific function: Controls heterocyst pattern formation. Required for the differentiation of intercalary heterocysts but not for terminal heterocysts [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=124, Percent_Identity=31.4516129032258, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1786599, Length=122, Percent_Identity=30.327868852459, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44679; Mature: 44679

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNNVLNEFKTCTQLQYNGQLIINSPKGQQWTFYYRLGRIVWATGGTHPFRRWRRLMAQ
CCCCHHHHHHHHHHHEEECCEEEEECCCCCEEEEEEEECEEEEECCCCCHHHHHHHHHHH
HCPQIDVDKMQLRPQDISMSYWDYRLLEILYKKQKIQREQIHNIVDNTINELLFELAQQS
HCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFVSISCERNQKVILETPMSFTSADVSMKQMLESWKNWSEAGLVNICPDLAPVICRPEQL
CEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHCCCHHHCCHHHHHCCCHHHH
QQQVSPSVYKNFVTLINGKSTLRDLAAKMKQNVLPVSRSLLPYVLKGIIELVELPDLPLA
HHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
VVETLNKATSAQPTKSKVPVIACVDDSPQVCKLLEDIITANGMKFIKIQDAVQALPLLIQ
HHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHC
EKPDLIFLDLIMPVASGYEICTQLRRIPTFANTPVIILTGNDGLLDRVRAKVVGSTDFLT
CCCCEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHC
KPVAADRVMSVVRKYLPMQTTSPAKTGSHLEFCQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVSNNVLNEFKTCTQLQYNGQLIINSPKGQQWTFYYRLGRIVWATGGTHPFRRWRRLMAQ
CCCCHHHHHHHHHHHEEECCEEEEECCCCCEEEEEEEECEEEEECCCCCHHHHHHHHHHH
HCPQIDVDKMQLRPQDISMSYWDYRLLEILYKKQKIQREQIHNIVDNTINELLFELAQQS
HCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFVSISCERNQKVILETPMSFTSADVSMKQMLESWKNWSEAGLVNICPDLAPVICRPEQL
CEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHCCCHHHCCHHHHHCCCHHHH
QQQVSPSVYKNFVTLINGKSTLRDLAAKMKQNVLPVSRSLLPYVLKGIIELVELPDLPLA
HHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
VVETLNKATSAQPTKSKVPVIACVDDSPQVCKLLEDIITANGMKFIKIQDAVQALPLLIQ
HHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHC
EKPDLIFLDLIMPVASGYEICTQLRRIPTFANTPVIILTGNDGLLDRVRAKVVGSTDFLT
CCCCEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHC
KPVAADRVMSVVRKYLPMQTTSPAKTGSHLEFCQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1608976; 11237320; 11759840 [H]