| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909941
Identifier: 75909941
GI number: 75909941
Start: 4650372
End: 4652789
Strand: Direct
Name: 75909941
Synonym: Ava_3737
Alternate gene names: NA
Gene position: 4650372-4652789 (Clockwise)
Preceding gene: 75909940
Following gene: 75909946
Centisome position: 73.05
GC content: 42.1
Gene sequence:
>2418_bases ATGACTCAAAACGGCAAAGGTAGTTCATGGCAATTGAACTTAGTAATTTCCTTAACATCTGCTGGTGTTATGAGCATCAG TATGCCTGCTTTGATTGTGCAATCTGCCTTTGCTCAGAGTGTGATTACGCCCGATCAAACCTTGGGTAATGAAAGGTCTG AGGTAAGTGAAAACTACGACAATACCCCTACAGAGTTAGTTAGAGGAGGGGCGATTCGGGGTAATAACCTCTTCCATAGT TTCCTAGAATTTAACGTTAATGAAGGACGTTCAACACTTTTTGTAGCTCCCAACAGTAGCATCCAGAACATTTTTGTCAG AGTTACAGGTAATAATCGCTCTGATATTTTCGGGAAGTTAGAGACCTCTGGTGTTAATGCCAATTTGTTTGTGATTAATC CCAATGGGATTTTTTTTGGGCCGAATGCCAGACTGAATATAGGTGGTTCTTTTGTGGCGAGTACAGCTAGTGGAATTCAG TTTGGCGATCGCACCATTTTTAGCGCTACTTCTCCCCAACCTTTACTGACAATGAGTGTACCTACGGGATTGCAATTTGG CAGAACAGGGGGAGAGATCAATTTACAAGGGGAATTAGTAGTTCCCACAGGCAAAACCCTGGCATTCGTAGGTGGCAATG TAACTCTAGATGGTGGTAATGTTAGCTTTCTCCGGCGTAGGACTCTCAAGGCGGAAAGTGGTCAAATTGCTATAGGTGGA ATACTAGAAGTAGGTACAGTAGGTCTAAATTTGGCTGGTAATAACGACATTAACAACCAAATTTTAAGTTTTTCTGATGA CGCAGTCTTAGGTAACGTATTCATCCAAAATCAAGCCAGGGTAGATGTCAGTGGTCAGGGTGCTGGTTATATCGAAATTA AAGGTAAGCAGATTGGACTCACTCGTGCATCGCAAGTGCTAGCAGAAACAGAAGGTAGTCAAAGCAGTCGCGGAATTTTT ATCCAGGCAGAAAAATTAACCCTTGACGATGGCTCACAAGTAACAGCATCTGTGAATAATCCTCAATCTACCGTTTCCGG AGGCAATGTTACAGTCAAGGCAAGTGATTCGGTACGAGTAACGGGAATAGTACCGAATAATCTAGAACGTTCTGGGAATC CCAGTGGTCTGTTTACTAGAACTGCCGGTAAAAGACCTGGGGGAAATTTGACTATTACAACAGGTAAATTAATTGTTGAA GATGGGGGTAACATATCCGCTCGTACTAGTGGAAATGATAGTCAGAGTATTGGCGGAACGATCAAAATAACTGCATCAGA ATTGGTCAAACTGATCGGCAATACTAAGGATTCTAGAGAATTTCCCAGTAGTGTGTTTGCTCAGACTTTGGGTGCTGGGA ATGCAGGTTCTGTGACGATTGATACTCCAGCGTTATTTGTCCAAGATGGTGCAGTCATATCAGCTGGAACTCAGACAAAT AGCCAGGGTAATGGGGGAAATATTACAATAAAAGCCTCTGATTTTATAGAAATAAGCGGAAGTTCGCCAATTGAGAAATT TCCTAGTGGCTTGTTTGCTCGCAGTCGAGGTAGTGGCAACGCAGGTTCTATATTAATTACTACAGGTCAACTTAATGTGC GCGATCTCGCTACAGTCACAGTAGAAACATTAGGCACAAGTAATGCTGGCGAAATAAAAATTAACGCCACAAGAATCAAC CTTTATGGTAAAGCAAATTTGAACGCTACAACTCCATTAGGTAATGGTGGTAATATCAATTTACAAATAGATGACCAACT ACTTTTACGCCGTGGTAGTTTCATCTCTACTAGAGCAGGCACTACAAGCGGTAGGGGTAATGGCGGTAATATAAATATTA ATATTCCCAATGGCTTTATCGTTGCCGTTCCTGGTGAAAATAGTGACATTACAGCTAATGCTTTTCAAGGTCAAGGTGGT AACGTTAGCATCAATGCCTTTAGCGTTTTTGGCATAGAGTTTCGAGAAAAAGATAGTCCACTCACCAACGACATCACAGC TAGTTCTGAATTTGGGCTAAACGGTACAGTCGAAATCAATACCCCAGAAGTTCAACCGAACCAAGGACTAATTAATTTAC CAACACAACCTGTTGAACCCCAGCTAGCCCAAGTTTGTCAAGCAGCCGCAGGACGAAATCAAGACAGTTTTACTATCACC GGGCGTGGTGGTTTGCCAAACAACCCTAATGAACTCCTTTATTCTGATGCTGTTCTTACAGATTGGGTAGCTGTGAGTAA TGTAGAAAACATCCCCAATACTCCTATCAGCAAAAGCATCTCTACTCCAACCCAAACTAATATCGTGGAAGCTACGGGAT GGGTAATCAGCCCTCAAGGTGAAGTTGTTCTCACAGTGAATACACCTAATACAAAATCCCCTAATTCTTGGCAAAAAACT AGTGCTTGTAATTCGTAA
Upstream 100 bases:
>100_bases TAGTGAGGAGATAGAGGGAATAGGGGGAATCTTTCTGTAATTTTCTCCCTTCCCGTTCCTTTCCCTATTTTTCAGCTAGT CAAGACACTAAATAACTGAA
Downstream 100 bases:
>100_bases TTTGTATTATCGCGTTACGTTTCGCAGGAAAGGCTTACGCCTACGTAATACAGAAAATCAGATTCCACCTTCGTGGGTTG AGACAATGGATCTCAACTGA
Product: filamentous hemagglutinin-like protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 805; Mature: 804
Protein sequence:
>805_residues MTQNGKGSSWQLNLVISLTSAGVMSISMPALIVQSAFAQSVITPDQTLGNERSEVSENYDNTPTELVRGGAIRGNNLFHS FLEFNVNEGRSTLFVAPNSSIQNIFVRVTGNNRSDIFGKLETSGVNANLFVINPNGIFFGPNARLNIGGSFVASTASGIQ FGDRTIFSATSPQPLLTMSVPTGLQFGRTGGEINLQGELVVPTGKTLAFVGGNVTLDGGNVSFLRRRTLKAESGQIAIGG ILEVGTVGLNLAGNNDINNQILSFSDDAVLGNVFIQNQARVDVSGQGAGYIEIKGKQIGLTRASQVLAETEGSQSSRGIF IQAEKLTLDDGSQVTASVNNPQSTVSGGNVTVKASDSVRVTGIVPNNLERSGNPSGLFTRTAGKRPGGNLTITTGKLIVE DGGNISARTSGNDSQSIGGTIKITASELVKLIGNTKDSREFPSSVFAQTLGAGNAGSVTIDTPALFVQDGAVISAGTQTN SQGNGGNITIKASDFIEISGSSPIEKFPSGLFARSRGSGNAGSILITTGQLNVRDLATVTVETLGTSNAGEIKINATRIN LYGKANLNATTPLGNGGNINLQIDDQLLLRRGSFISTRAGTTSGRGNGGNININIPNGFIVAVPGENSDITANAFQGQGG NVSINAFSVFGIEFREKDSPLTNDITASSEFGLNGTVEINTPEVQPNQGLINLPTQPVEPQLAQVCQAAAGRNQDSFTIT GRGGLPNNPNELLYSDAVLTDWVAVSNVENIPNTPISKSISTPTQTNIVEATGWVISPQGEVVLTVNTPNTKSPNSWQKT SACNS
Sequences:
>Translated_805_residues MTQNGKGSSWQLNLVISLTSAGVMSISMPALIVQSAFAQSVITPDQTLGNERSEVSENYDNTPTELVRGGAIRGNNLFHS FLEFNVNEGRSTLFVAPNSSIQNIFVRVTGNNRSDIFGKLETSGVNANLFVINPNGIFFGPNARLNIGGSFVASTASGIQ FGDRTIFSATSPQPLLTMSVPTGLQFGRTGGEINLQGELVVPTGKTLAFVGGNVTLDGGNVSFLRRRTLKAESGQIAIGG ILEVGTVGLNLAGNNDINNQILSFSDDAVLGNVFIQNQARVDVSGQGAGYIEIKGKQIGLTRASQVLAETEGSQSSRGIF IQAEKLTLDDGSQVTASVNNPQSTVSGGNVTVKASDSVRVTGIVPNNLERSGNPSGLFTRTAGKRPGGNLTITTGKLIVE DGGNISARTSGNDSQSIGGTIKITASELVKLIGNTKDSREFPSSVFAQTLGAGNAGSVTIDTPALFVQDGAVISAGTQTN SQGNGGNITIKASDFIEISGSSPIEKFPSGLFARSRGSGNAGSILITTGQLNVRDLATVTVETLGTSNAGEIKINATRIN LYGKANLNATTPLGNGGNINLQIDDQLLLRRGSFISTRAGTTSGRGNGGNININIPNGFIVAVPGENSDITANAFQGQGG NVSINAFSVFGIEFREKDSPLTNDITASSEFGLNGTVEINTPEVQPNQGLINLPTQPVEPQLAQVCQAAAGRNQDSFTIT GRGGLPNNPNELLYSDAVLTDWVAVSNVENIPNTPISKSISTPTQTNIVEATGWVISPQGEVVLTVNTPNTKSPNSWQKT SACNS >Mature_804_residues TQNGKGSSWQLNLVISLTSAGVMSISMPALIVQSAFAQSVITPDQTLGNERSEVSENYDNTPTELVRGGAIRGNNLFHSF LEFNVNEGRSTLFVAPNSSIQNIFVRVTGNNRSDIFGKLETSGVNANLFVINPNGIFFGPNARLNIGGSFVASTASGIQF GDRTIFSATSPQPLLTMSVPTGLQFGRTGGEINLQGELVVPTGKTLAFVGGNVTLDGGNVSFLRRRTLKAESGQIAIGGI LEVGTVGLNLAGNNDINNQILSFSDDAVLGNVFIQNQARVDVSGQGAGYIEIKGKQIGLTRASQVLAETEGSQSSRGIFI QAEKLTLDDGSQVTASVNNPQSTVSGGNVTVKASDSVRVTGIVPNNLERSGNPSGLFTRTAGKRPGGNLTITTGKLIVED GGNISARTSGNDSQSIGGTIKITASELVKLIGNTKDSREFPSSVFAQTLGAGNAGSVTIDTPALFVQDGAVISAGTQTNS QGNGGNITIKASDFIEISGSSPIEKFPSGLFARSRGSGNAGSILITTGQLNVRDLATVTVETLGTSNAGEIKINATRINL YGKANLNATTPLGNGGNINLQIDDQLLLRRGSFISTRAGTTSGRGNGGNININIPNGFIVAVPGENSDITANAFQGQGGN VSINAFSVFGIEFREKDSPLTNDITASSEFGLNGTVEINTPEVQPNQGLINLPTQPVEPQLAQVCQAAAGRNQDSFTITG RGGLPNNPNELLYSDAVLTDWVAVSNVENIPNTPISKSISTPTQTNIVEATGWVISPQGEVVLTVNTPNTKSPNSWQKTS ACNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83710; Mature: 83579
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNGKGSSWQLNLVISLTSAGVMSISMPALIVQSAFAQSVITPDQTLGNERSEVSENYD CCCCCCCCCEEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCC NTPTELVRGGAIRGNNLFHSFLEFNVNEGRSTLFVAPNSSIQNIFVRVTGNNRSDIFGKL CCHHHHHCCCCEECCHHEEEEHEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEE ETSGVNANLFVINPNGIFFGPNARLNIGGSFVASTASGIQFGDRTIFSATSPQPLLTMSV ECCCCCEEEEEECCCCEEECCCCEEEECCCEEECCCCCCEECCEEEEECCCCCCEEEEEC PTGLQFGRTGGEINLQGELVVPTGKTLAFVGGNVTLDGGNVSFLRRRTLKAESGQIAIGG CCCCEECCCCCEEEEEEEEEECCCCEEEEECCEEEECCCCEEEEEHEECCCCCCCEEEEE ILEVGTVGLNLAGNNDINNQILSFSDDAVLGNVFIQNQARVDVSGQGAGYIEIKGKQIGL EEEECEEEEEECCCCCCCCCEEEECCCEEEEEEEEECCEEEEECCCCCEEEEECCCEECC TRASQVLAETEGSQSSRGIFIQAEKLTLDDGSQVTASVNNPQSTVSGGNVTVKASDSVRV HHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCEEE TGIVPNNLERSGNPSGLFTRTAGKRPGGNLTITTGKLIVEDGGNISARTSGNDSQSIGGT EEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEECEEEEECCCCEEEEECCCCCCCCCCE IKITASELVKLIGNTKDSREFPSSVFAQTLGAGNAGSVTIDTPALFVQDGAVISAGTQTN EEEEHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCEEEEECCEEEEECCCCC SQGNGGNITIKASDFIEISGSSPIEKFPSGLFARSRGSGNAGSILITTGQLNVRDLATVT CCCCCCEEEEEECCEEEECCCCCHHHCCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEE VETLGTSNAGEIKINATRINLYGKANLNATTPLGNGGNINLQIDDQLLLRRGSFISTRAG EEECCCCCCCEEEEEEEEEEEEEECCCCEECCCCCCCEEEEEECHHHHHHCCCEEEECCC TTSGRGNGGNININIPNGFIVAVPGENSDITANAFQGQGGNVSINAFSVFGIEFREKDSP CCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCC LTNDITASSEFGLNGTVEINTPEVQPNQGLINLPTQPVEPQLAQVCQAAAGRNQDSFTIT CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE GRGGLPNNPNELLYSDAVLTDWVAVSNVENIPNTPISKSISTPTQTNIVEATGWVISPQG ECCCCCCCCHHEEEECCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCC EVVLTVNTPNTKSPNSWQKTSACNS CEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQNGKGSSWQLNLVISLTSAGVMSISMPALIVQSAFAQSVITPDQTLGNERSEVSENYD CCCCCCCCEEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCC NTPTELVRGGAIRGNNLFHSFLEFNVNEGRSTLFVAPNSSIQNIFVRVTGNNRSDIFGKL CCHHHHHCCCCEECCHHEEEEHEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEE ETSGVNANLFVINPNGIFFGPNARLNIGGSFVASTASGIQFGDRTIFSATSPQPLLTMSV ECCCCCEEEEEECCCCEEECCCCEEEECCCEEECCCCCCEECCEEEEECCCCCCEEEEEC PTGLQFGRTGGEINLQGELVVPTGKTLAFVGGNVTLDGGNVSFLRRRTLKAESGQIAIGG CCCCEECCCCCEEEEEEEEEECCCCEEEEECCEEEECCCCEEEEEHEECCCCCCCEEEEE ILEVGTVGLNLAGNNDINNQILSFSDDAVLGNVFIQNQARVDVSGQGAGYIEIKGKQIGL EEEECEEEEEECCCCCCCCCEEEECCCEEEEEEEEECCEEEEECCCCCEEEEECCCEECC TRASQVLAETEGSQSSRGIFIQAEKLTLDDGSQVTASVNNPQSTVSGGNVTVKASDSVRV HHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCEEE TGIVPNNLERSGNPSGLFTRTAGKRPGGNLTITTGKLIVEDGGNISARTSGNDSQSIGGT EEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEECEEEEECCCCEEEEECCCCCCCCCCE IKITASELVKLIGNTKDSREFPSSVFAQTLGAGNAGSVTIDTPALFVQDGAVISAGTQTN EEEEHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCEEEEECCEEEEECCCCC SQGNGGNITIKASDFIEISGSSPIEKFPSGLFARSRGSGNAGSILITTGQLNVRDLATVT CCCCCCEEEEEECCEEEECCCCCHHHCCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEE VETLGTSNAGEIKINATRINLYGKANLNATTPLGNGGNINLQIDDQLLLRRGSFISTRAG EEECCCCCCCEEEEEEEEEEEEEECCCCEECCCCCCCEEEEEECHHHHHHCCCEEEECCC TTSGRGNGGNININIPNGFIVAVPGENSDITANAFQGQGGNVSINAFSVFGIEFREKDSP CCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCC LTNDITASSEFGLNGTVEINTPEVQPNQGLINLPTQPVEPQLAQVCQAAAGRNQDSFTIT CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE GRGGLPNNPNELLYSDAVLTDWVAVSNVENIPNTPISKSISTPTQTNIVEATGWVISPQG ECCCCCCCCHHEEEECCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCC EVVLTVNTPNTKSPNSWQKTSACNS CEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA