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The map label for this gene is yrdA [C]

Identifier: 75909886

GI number: 75909886

Start: 4588754

End: 4589362

Strand: Direct

Name: yrdA [C]

Synonym: Ava_3681

Alternate gene names: 75909886

Gene position: 4588754-4589362 (Clockwise)

Preceding gene: 75909880

Following gene: 75909887

Centisome position: 72.09

GC content: 45.81

Gene sequence:

>609_bases
GTGATATTCTGGTTTTGCAACCAGCCTCCAAGGGTGGAGTTATTCCAGTGTTCCTGGGTACCATATTCATATTCTATCGT
GTCTACCAATTCTTACTGGCCTTCTCCCGATTTTTCTCAAGCCGCCTTCATCGCCGCTAATGCTGTTGTTATGGGTTCAG
TCAAAATAGCAGCAGGAGCAAGCATTTGGTACGGAGCAGTAGTGAGGGCAGATGTAGAAAGCATTGACATTGGTGAATGC
ACAAATATTCAAGATGGAGCCATTTTACACGGTGATCCTGGTTTGCCAACAGTACTAGAAGATCATGTCACTGTCGGACA
TCGAGCAGTCATTCACTCCGCCCATATTGAACGCGGTAGTTTGATTGGCATTGGCGCAGTAATTTTAGATGGAGTCCGAG
TAGGTGCTGGTAGCATCATAGGTGCTGGATCGATAGTAACTAAGAATATACCCCCCTTATCTCTGGTTGTGGGTGTTCCC
GGTAAAGTTTTACGTCCCATTACCCCAGAAGAAGCCGCAGACCTGATTCAACACGCCGAACGTTATAAAAAGTTAGCATT
AGTCCATGCTGGCAAGGGTAGTGATATTGGGTTTTATCCGCAAGAGTAA

Upstream 100 bases:

>100_bases
GCTCCACCATACTGGGGGAATTGTTCGTTGCTGCAAGTATACGGTATTGCAGCCAGAACAATTTTCACCGTTGTCTTCCT
CAATTTGGAGGTGAGACTCT

Downstream 100 bases:

>100_bases
AGCCGGGAGCAGGGAGCAGGGGAGGCAGGGGTGCAGGGGAGGCAAAGAGGAATAACTATGGACTATGGACTATGGACAAA
TTTAACCTTTCTTTACAAAT

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MIFWFCNQPPRVELFQCSWVPYSYSIVSTNSYWPSPDFSQAAFIAANAVVMGSVKIAAGASIWYGAVVRADVESIDIGEC
TNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGSLIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVP
GKVLRPITPEEAADLIQHAERYKKLALVHAGKGSDIGFYPQE

Sequences:

>Translated_202_residues
MIFWFCNQPPRVELFQCSWVPYSYSIVSTNSYWPSPDFSQAAFIAANAVVMGSVKIAAGASIWYGAVVRADVESIDIGEC
TNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGSLIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVP
GKVLRPITPEEAADLIQHAERYKKLALVHAGKGSDIGFYPQE
>Mature_202_residues
MIFWFCNQPPRVELFQCSWVPYSYSIVSTNSYWPSPDFSQAAFIAANAVVMGSVKIAAGASIWYGAVVRADVESIDIGEC
TNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGSLIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVP
GKVLRPITPEEAADLIQHAERYKKLALVHAGKGSDIGFYPQE

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=158, Percent_Identity=38.6075949367089, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787667, Length=153, Percent_Identity=32.6797385620915, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI87081681, Length=133, Percent_Identity=33.0827067669173, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 21425; Mature: 21425

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFWFCNQPPRVELFQCSWVPYSYSIVSTNSYWPSPDFSQAAFIAANAVVMGSVKIAAGA
CEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECEEEEEEEEEECCC
SIWYGAVVRADVESIDIGECTNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGS
CCHHHEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCHHEEEEECCCCCCC
LIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVPGKVLRPITPEEAADLIQHAE
EEEEHHHHHCCEEECCCCEEECCCEEECCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHH
RYKKLALVHAGKGSDIGFYPQE
HHHHEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MIFWFCNQPPRVELFQCSWVPYSYSIVSTNSYWPSPDFSQAAFIAANAVVMGSVKIAAGA
CEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECEEEEEEEEEECCC
SIWYGAVVRADVESIDIGECTNIQDGAILHGDPGLPTVLEDHVTVGHRAVIHSAHIERGS
CCHHHEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCHHEEEEECCCCCCC
LIGIGAVILDGVRVGAGSIIGAGSIVTKNIPPLSLVVGVPGKVLRPITPEEAADLIQHAE
EEEEHHHHHCCEEECCCCEEECCCEEECCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHH
RYKKLALVHAGKGSDIGFYPQE
HHHHEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]