| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909876
Identifier: 75909876
GI number: 75909876
Start: 4578115
End: 4578810
Strand: Direct
Name: 75909876
Synonym: Ava_3671
Alternate gene names: NA
Gene position: 4578115-4578810 (Clockwise)
Preceding gene: 75909875
Following gene: 75909877
Centisome position: 71.92
GC content: 32.33
Gene sequence:
>696_bases ATGCAATTAGTAATTTTCGATATTGATGGTACATTAATTAATTCAAACAGTATTGATTCAGATTGCTTTCTCAGTGCTTT TAAATTAGAGTTTGGTTTTACTAATATTAGTTCCAATTGGGCTAAATACACCAACATCACAGATTCAGGAATTGCACAAG AAATTTTCATAGAAAAGTTAGGTCGATTACCAACACAAGTAGAATTGGAAAATATTAAAAAATGTTTTGTTAATTTATTG CAAGAATCATTTCATGAAAATCCAAATTTATTCAGTGAAATTCTTGGGTCTGGACAAATATTAGCTGAATTACGGGTAAA TCAAGACTGGTGCGTGGCGATCGCAACGGGTGGCTGGTATGATTCTGCAATCTTGAAACTAGAAAAAGCAAACTTAAATA TACAGGGTATTCCCCTTGCTTCATCGGATGATGGAATTGCAAGAGACGATATTGTCAATTGTGCCATTTCAAAATCTAAA GCAATTTATCAAGTCAGAGAATTTCAAAAAATCGTTTTTGTTGGTGATGGTGTGTGGGATGTGGCAACAGCTTACAATCT CAATATTGACTTTCTTGGCAGAGAAAATAAATTAGACAACATTTTACTTCATGCGGGTGTTGAAAATATAGTGGAAGATT TTAGCGATTCGACTAAATTTTTTCAATTATTAAAAATAGCAAAAATACCTAGATAG
Upstream 100 bases:
>100_bases TAACTATACTCAGAAATTATTCATACTGACGCACCCTAGATTTTAGAGATTTTTTTATCTGGAAATCCCTAAGAAACGCT ATATATGTAAATTTTATTCT
Downstream 100 bases:
>100_bases ACTATGAATACTATTCTTCACATCACCAAACGTCAACAATGGGAACAAGCCAAAAATATCGGCATCTACCATGCTGATTC GCTGGATGCGGAAGGATTTA
Product: haloacid dehalogenase-like protein hydrolase
Products: NA
Alternate protein names: Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hypothethical Protein; Haloacid Dehalogenase-Like Protein Hydrolase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MQLVIFDIDGTLINSNSIDSDCFLSAFKLEFGFTNISSNWAKYTNITDSGIAQEIFIEKLGRLPTQVELENIKKCFVNLL QESFHENPNLFSEILGSGQILAELRVNQDWCVAIATGGWYDSAILKLEKANLNIQGIPLASSDDGIARDDIVNCAISKSK AIYQVREFQKIVFVGDGVWDVATAYNLNIDFLGRENKLDNILLHAGVENIVEDFSDSTKFFQLLKIAKIPR
Sequences:
>Translated_231_residues MQLVIFDIDGTLINSNSIDSDCFLSAFKLEFGFTNISSNWAKYTNITDSGIAQEIFIEKLGRLPTQVELENIKKCFVNLL QESFHENPNLFSEILGSGQILAELRVNQDWCVAIATGGWYDSAILKLEKANLNIQGIPLASSDDGIARDDIVNCAISKSK AIYQVREFQKIVFVGDGVWDVATAYNLNIDFLGRENKLDNILLHAGVENIVEDFSDSTKFFQLLKIAKIPR >Mature_231_residues MQLVIFDIDGTLINSNSIDSDCFLSAFKLEFGFTNISSNWAKYTNITDSGIAQEIFIEKLGRLPTQVELENIKKCFVNLL QESFHENPNLFSEILGSGQILAELRVNQDWCVAIATGGWYDSAILKLEKANLNIQGIPLASSDDGIARDDIVNCAISKSK AIYQVREFQKIVFVGDGVWDVATAYNLNIDFLGRENKLDNILLHAGVENIVEDFSDSTKFFQLLKIAKIPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25833; Mature: 25833
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLVIFDIDGTLINSNSIDSDCFLSAFKLEFGFTNISSNWAKYTNITDSGIAQEIFIEKL CEEEEEECCCEEEECCCCCHHHHHEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHH GRLPTQVELENIKKCFVNLLQESFHENPNLFSEILGSGQILAELRVNQDWCVAIATGGWY CCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCEEEEEEECCCC DSAILKLEKANLNIQGIPLASSDDGIARDDIVNCAISKSKAIYQVREFQKIVFVGDGVWD CHHEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHCEEEEEEECCHHH VATAYNLNIDFLGRENKLDNILLHAGVENIVEDFSDSTKFFQLLKIAKIPR HHEEEECEEEEECCCCCCCHHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MQLVIFDIDGTLINSNSIDSDCFLSAFKLEFGFTNISSNWAKYTNITDSGIAQEIFIEKL CEEEEEECCCEEEECCCCCHHHHHEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHH GRLPTQVELENIKKCFVNLLQESFHENPNLFSEILGSGQILAELRVNQDWCVAIATGGWY CCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCEEEEEEECCCC DSAILKLEKANLNIQGIPLASSDDGIARDDIVNCAISKSKAIYQVREFQKIVFVGDGVWD CHHEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHCEEEEEEECCHHH VATAYNLNIDFLGRENKLDNILLHAGVENIVEDFSDSTKFFQLLKIAKIPR HHEEEECEEEEECCCCCCCHHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA