| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909768
Identifier: 75909768
GI number: 75909768
Start: 4436367
End: 4437086
Strand: Direct
Name: 75909768
Synonym: Ava_3563
Alternate gene names: NA
Gene position: 4436367-4437086 (Clockwise)
Preceding gene: 75909767
Following gene: 75909769
Centisome position: 69.69
GC content: 33.19
Gene sequence:
>720_bases ATGCCTAGTGTTCGCCTTTGGACTCCAGAGTCCGACTATGATAGGGATGCGGTCTGCTGTATTGCCAAAAAAATAGTTAA TTTTTACAGCTATGATTTAACAATTGAATATGCAACTAAGCAAGCTTATAATGATGCTGCACGCAAGCCTGGTGGTTTAA AGAAAGCAGTTGATATTTACCTTAAGCATAACGACTTAGTAATTTTTCTCATAGATGCAGATGGTATACAATCACAAGCA CAAAGGCTTAAGGAAAGAAATTCTCTATTTAACAAAATTCAAGAAGTAGTCAACATATCTAATGGCAAAGCTAAATTAAT TCTCATACTTCAAGAAATTGAAGCATGGTTATTAGTAGATTGTTTAGGTATCTGTTGCTACTTTACCAAAAACCCTCAAA ATAGAAATCATCAAGAGTGGATGAGTTTTGCTCATCGTAAACAACTTGGTAAAACCAATCTTATTACAGAAGCTACACCC GGAGGAAGAAATGCAAAAGAACACCTTGAGGAACTTTCAGAAGACATATTAATCAAAAATAATCCCAAATTGAGAAATAA ACCGCAAAATTTGAAAGAGCTTAAATATCAGGAAGACCAAGCAGCTAAGATTGCTGAATTTATAGAAATTAATAATCAAA CAATTAAGAGAAATGACTCTTTAGAAGAATTAGCGCAGCATCTAAAATTATTGTCCGAAAATAAGCTTTTTGATACATAA
Upstream 100 bases:
>100_bases GCGGAAAACCGCGATGACCTTTTAGAGTGGATGACTGATTTTGGATTAGGTAGCGCAATTTATCATAGTCACTTAATTGA AGAAATTTTAGCTATTTAAT
Downstream 100 bases:
>100_bases AATAACAAACTAAAGCCTTGAATGCTCAAGAAGAAAGCATATTTCAAGCGCAACTTGCTACTATTGAACCAAGGCAGGAG GAAAGAGTTATGCAAATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MPSVRLWTPESDYDRDAVCCIAKKIVNFYSYDLTIEYATKQAYNDAARKPGGLKKAVDIYLKHNDLVIFLIDADGIQSQA QRLKERNSLFNKIQEVVNISNGKAKLILILQEIEAWLLVDCLGICCYFTKNPQNRNHQEWMSFAHRKQLGKTNLITEATP GGRNAKEHLEELSEDILIKNNPKLRNKPQNLKELKYQEDQAAKIAEFIEINNQTIKRNDSLEELAQHLKLLSENKLFDT
Sequences:
>Translated_239_residues MPSVRLWTPESDYDRDAVCCIAKKIVNFYSYDLTIEYATKQAYNDAARKPGGLKKAVDIYLKHNDLVIFLIDADGIQSQA QRLKERNSLFNKIQEVVNISNGKAKLILILQEIEAWLLVDCLGICCYFTKNPQNRNHQEWMSFAHRKQLGKTNLITEATP GGRNAKEHLEELSEDILIKNNPKLRNKPQNLKELKYQEDQAAKIAEFIEINNQTIKRNDSLEELAQHLKLLSENKLFDT >Mature_238_residues PSVRLWTPESDYDRDAVCCIAKKIVNFYSYDLTIEYATKQAYNDAARKPGGLKKAVDIYLKHNDLVIFLIDADGIQSQAQ RLKERNSLFNKIQEVVNISNGKAKLILILQEIEAWLLVDCLGICCYFTKNPQNRNHQEWMSFAHRKQLGKTNLITEATPG GRNAKEHLEELSEDILIKNNPKLRNKPQNLKELKYQEDQAAKIAEFIEINNQTIKRNDSLEELAQHLKLLSENKLFDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27576; Mature: 27445
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVRLWTPESDYDRDAVCCIAKKIVNFYSYDLTIEYATKQAYNDAARKPGGLKKAVDIY CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCCHHHHEEE LKHNDLVIFLIDADGIQSQAQRLKERNSLFNKIQEVVNISNGKAKLILILQEIEAWLLVD EECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH CLGICCYFTKNPQNRNHQEWMSFAHRKQLGKTNLITEATPGGRNAKEHLEELSEDILIKN HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCEECC NPKLRNKPQNLKELKYQEDQAAKIAEFIEINNQTIKRNDSLEELAQHLKLLSENKLFDT CCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PSVRLWTPESDYDRDAVCCIAKKIVNFYSYDLTIEYATKQAYNDAARKPGGLKKAVDIY CCCEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCCHHHHEEE LKHNDLVIFLIDADGIQSQAQRLKERNSLFNKIQEVVNISNGKAKLILILQEIEAWLLVD EECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH CLGICCYFTKNPQNRNHQEWMSFAHRKQLGKTNLITEATPGGRNAKEHLEELSEDILIKN HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCEECC NPKLRNKPQNLKELKYQEDQAAKIAEFIEINNQTIKRNDSLEELAQHLKLLSENKLFDT CCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA