| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909600
Identifier: 75909600
GI number: 75909600
Start: 4222478
End: 4223125
Strand: Direct
Name: 75909600
Synonym: Ava_3394
Alternate gene names: NA
Gene position: 4222478-4223125 (Clockwise)
Preceding gene: 75909599
Following gene: 75909602
Centisome position: 66.33
GC content: 42.44
Gene sequence:
>648_bases ATGAAAAGCTTATTGTTAGGGTTAATAGCTGCATTGGCATTTGCTCCCAACGCATACGCAGCAAACATTGTATATAGCGA AAGCTCCCAGGGTGACTTCTCTGGCAATAACTTGAACCCGACAAAACTCAACCTCTCCCAGGGTTCCAATATCATCATTG GCTCTACAACAGGTAACCCCAATCTTGACCAAGATTTCTTTTCCATCACGATTCCCTCTGGTTATGCAATCAAAAAAATT ATTTTGGCTGGCTATAAGGGACTAGATGACGACCTGATCAATCAAGGATTTTTAGCGGTACAAGCAGGTTCCCTGATTGA AAATGGCACCATTACTGGTAACAATCCTCAATTACTTGGTGCAGCCACGATTGGTGCAGAACCAGGAAAACAAGTTGGTG ATAATATCTTAGACGATTTGGCTAAAGCGGATTCCATCCGGGGTTTTTCATTTGTCGGTTTCCCTAGTGGTGTACTCACA CAGGGAAATTACACCTTTTGGATTCAGGAAACTAGGAACGGTATAGAAGAATATCAGTTAGATTTTGTACTTACCCAAAC TCCCGAACCTTCCACTATGTTAGGTCTAGGTATGGTAATGGGTATTGGTATGTTGTTGAACCGGAAGCGACTACTCCACT ACAGGTAA
Upstream 100 bases:
>100_bases CTGTTAAGTAAATCGGGCATACACTGTCAGATAATTAAGGGTAATCGATTGTCGAAGTCTGCATCGATAACCTGATTTCC CTTAAAACAAAGTCAAATTT
Downstream 100 bases:
>100_bases CCCAGACAACGCCATTATGAATACCTGATGGAGAGGCTAACGCCAAAAAAATTCCTAATCAAGAAATCTAGATTATGTTC TGGTTTCTAGTTTTGCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKSLLLGLIAALAFAPNAYAANIVYSESSQGDFSGNNLNPTKLNLSQGSNIIIGSTTGNPNLDQDFFSITIPSGYAIKKI ILAGYKGLDDDLINQGFLAVQAGSLIENGTITGNNPQLLGAATIGAEPGKQVGDNILDDLAKADSIRGFSFVGFPSGVLT QGNYTFWIQETRNGIEEYQLDFVLTQTPEPSTMLGLGMVMGIGMLLNRKRLLHYR
Sequences:
>Translated_215_residues MKSLLLGLIAALAFAPNAYAANIVYSESSQGDFSGNNLNPTKLNLSQGSNIIIGSTTGNPNLDQDFFSITIPSGYAIKKI ILAGYKGLDDDLINQGFLAVQAGSLIENGTITGNNPQLLGAATIGAEPGKQVGDNILDDLAKADSIRGFSFVGFPSGVLT QGNYTFWIQETRNGIEEYQLDFVLTQTPEPSTMLGLGMVMGIGMLLNRKRLLHYR >Mature_215_residues MKSLLLGLIAALAFAPNAYAANIVYSESSQGDFSGNNLNPTKLNLSQGSNIIIGSTTGNPNLDQDFFSITIPSGYAIKKI ILAGYKGLDDDLINQGFLAVQAGSLIENGTITGNNPQLLGAATIGAEPGKQVGDNILDDLAKADSIRGFSFVGFPSGVLT QGNYTFWIQETRNGIEEYQLDFVLTQTPEPSTMLGLGMVMGIGMLLNRKRLLHYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22951; Mature: 22951
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLLGLIAALAFAPNAYAANIVYSESSQGDFSGNNLNPTKLNLSQGSNIIIGSTTGNP CHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCC NLDQDFFSITIPSGYAIKKIILAGYKGLDDDLINQGFLAVQAGSLIENGTITGNNPQLLG CCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCEECCCEEECCCCCEEE AATIGAEPGKQVGDNILDDLAKADSIRGFSFVGFPSGVLTQGNYTFWIQETRNGIEEYQL EEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCEEEEEEHHHCCHHHEEE DFVLTQTPEPSTMLGLGMVMGIGMLLNRKRLLHYR EEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure MKSLLLGLIAALAFAPNAYAANIVYSESSQGDFSGNNLNPTKLNLSQGSNIIIGSTTGNP CHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCC NLDQDFFSITIPSGYAIKKIILAGYKGLDDDLINQGFLAVQAGSLIENGTITGNNPQLLG CCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCEECCCEEECCCCCEEE AATIGAEPGKQVGDNILDDLAKADSIRGFSFVGFPSGVLTQGNYTFWIQETRNGIEEYQL EEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCEEEEEEHHHCCHHHEEE DFVLTQTPEPSTMLGLGMVMGIGMLLNRKRLLHYR EEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA