| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909577
Identifier: 75909577
GI number: 75909577
Start: 4194465
End: 4195544
Strand: Direct
Name: 75909577
Synonym: Ava_3371
Alternate gene names: NA
Gene position: 4194465-4195544 (Clockwise)
Preceding gene: 75909576
Following gene: 75909581
Centisome position: 65.89
GC content: 34.26
Gene sequence:
>1080_bases ATGGCAGTCAAAAAGTTAACTGATAAGAACACCAAAGCAGAAATTTTACAGGCTTATGAAGATTTAACTAAAGAAACAGC ATCTCTTAAGTCTCAACTTAGCCAAGCGCCTAAAGAAACACCAACTATCAAGAAAGAACAACCAAAATCAGAACAAACTC AGATAATGAATCAGCCTTATACCATCCAACAAAAAATGAATCATACAATTGAGAGTCTAGCAAAAATTCAGTTGGGATTT GGTAGTGCAGTAAATGAATTATCGGAAAAGCTGACTACACAAGCTTCAACACTATCTGGAATTAGCGAAGCGGTGGCAAC AGAAGTTGAGCAATTAAAAACCCTACATAGCTTAGAAGTTTCTGAAAATACATTAGATACACTTATTACTACTTATGAAG AAAATGCAAAAGCCTATCAAGATGAATTTAATCAGCGCTATGAAGTACTTTCGCAAGAAATTCTTGAACAAAGAATAAAT TGGCAAAAAGAACAAGAAGAATACCAAAGAAATATCAAAGAACGAAATGAAAATCAAAATAAAACTCGACAACGAGATAA TGCAGAGTACAAATATGATTTAGAACTTGCTCGTCAATTGGCAACGGATGACTACGAACAACAGCAAAAAGCTTTGTATA ACCAATTAGAAGCATTACAACAAGATGCAGAAAAACAGTGGAACGATCGGGAAAAAGTAATTGCCGAAAGAGAAAAGCAA TTTGAAGATTTTAAAACGAAAGTAGAAGTATTTCCTAAAGAGAAAGAAGCTGCCGTTAAGAAAGCTACAGAAGAAGGTAA AGGGATTGCTTACTACCAAGCTAAGGTTAAAGCTGATTTATATGCTAAAGAAGTAGAAGGACAGAAACGCTTCTATGAAC AGAGACTTCAGTCTTTGGAACAAACAATTAACAATCAAGAGACGCGACTACAAAACTTATCTAAACAGCTTGATTCTGCA CTCAAGCAAGTTCAAGATTTAGCGGTAAAAGCTATTGAAGGTACTGCTAATGTCAATTCTTATCAAGCAATCAAGGAAAT AGCTTTAGAACAGGCAAAAAGTCAAGTGAAAAATAAATAA
Upstream 100 bases:
>100_bases TCACAAGATTTAGCAATGAGAGCTTTTGATAGTTCCACAACTAAATAAATATCAGTTTTTGGAAATTCGCAACCAATAGT GGCAGTAAATAGAGGTTTTT
Downstream 100 bases:
>100_bases AATACAAATAATAAAAATAAATAAAAAGACGTAATTTTCGTTACGTCTTTTTAAAATGTAAACACATTTAATTAAAAATA TTATTGGTCTGTTTTATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAVKKLTDKNTKAEILQAYEDLTKETASLKSQLSQAPKETPTIKKEQPKSEQTQIMNQPYTIQQKMNHTIESLAKIQLGF GSAVNELSEKLTTQASTLSGISEAVATEVEQLKTLHSLEVSENTLDTLITTYEENAKAYQDEFNQRYEVLSQEILEQRIN WQKEQEEYQRNIKERNENQNKTRQRDNAEYKYDLELARQLATDDYEQQQKALYNQLEALQQDAEKQWNDREKVIAEREKQ FEDFKTKVEVFPKEKEAAVKKATEEGKGIAYYQAKVKADLYAKEVEGQKRFYEQRLQSLEQTINNQETRLQNLSKQLDSA LKQVQDLAVKAIEGTANVNSYQAIKEIALEQAKSQVKNK
Sequences:
>Translated_359_residues MAVKKLTDKNTKAEILQAYEDLTKETASLKSQLSQAPKETPTIKKEQPKSEQTQIMNQPYTIQQKMNHTIESLAKIQLGF GSAVNELSEKLTTQASTLSGISEAVATEVEQLKTLHSLEVSENTLDTLITTYEENAKAYQDEFNQRYEVLSQEILEQRIN WQKEQEEYQRNIKERNENQNKTRQRDNAEYKYDLELARQLATDDYEQQQKALYNQLEALQQDAEKQWNDREKVIAEREKQ FEDFKTKVEVFPKEKEAAVKKATEEGKGIAYYQAKVKADLYAKEVEGQKRFYEQRLQSLEQTINNQETRLQNLSKQLDSA LKQVQDLAVKAIEGTANVNSYQAIKEIALEQAKSQVKNK >Mature_358_residues AVKKLTDKNTKAEILQAYEDLTKETASLKSQLSQAPKETPTIKKEQPKSEQTQIMNQPYTIQQKMNHTIESLAKIQLGFG SAVNELSEKLTTQASTLSGISEAVATEVEQLKTLHSLEVSENTLDTLITTYEENAKAYQDEFNQRYEVLSQEILEQRINW QKEQEEYQRNIKERNENQNKTRQRDNAEYKYDLELARQLATDDYEQQQKALYNQLEALQQDAEKQWNDREKVIAEREKQF EDFKTKVEVFPKEKEAAVKKATEEGKGIAYYQAKVKADLYAKEVEGQKRFYEQRLQSLEQTINNQETRLQNLSKQLDSAL KQVQDLAVKAIEGTANVNSYQAIKEIALEQAKSQVKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41561; Mature: 41430
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKKLTDKNTKAEILQAYEDLTKETASLKSQLSQAPKETPTIKKEQPKSEQTQIMNQPY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH TIQQKMNHTIESLAKIQLGFGSAVNELSEKLTTQASTLSGISEAVATEVEQLKTLHSLEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SENTLDTLITTYEENAKAYQDEFNQRYEVLSQEILEQRINWQKEQEEYQRNIKERNENQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH KTRQRDNAEYKYDLELARQLATDDYEQQQKALYNQLEALQQDAEKQWNDREKVIAEREKQ HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FEDFKTKVEVFPKEKEAAVKKATEEGKGIAYYQAKVKADLYAKEVEGQKRFYEQRLQSLE HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTINNQETRLQNLSKQLDSALKQVQDLAVKAIEGTANVNSYQAIKEIALEQAKSQVKNK HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVKKLTDKNTKAEILQAYEDLTKETASLKSQLSQAPKETPTIKKEQPKSEQTQIMNQPY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH TIQQKMNHTIESLAKIQLGFGSAVNELSEKLTTQASTLSGISEAVATEVEQLKTLHSLEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SENTLDTLITTYEENAKAYQDEFNQRYEVLSQEILEQRINWQKEQEEYQRNIKERNENQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH KTRQRDNAEYKYDLELARQLATDDYEQQQKALYNQLEALQQDAEKQWNDREKVIAEREKQ HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FEDFKTKVEVFPKEKEAAVKKATEEGKGIAYYQAKVKADLYAKEVEGQKRFYEQRLQSLE HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTINNQETRLQNLSKQLDSALKQVQDLAVKAIEGTANVNSYQAIKEIALEQAKSQVKNK HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA