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The map label for this gene is rfbU [H]

Identifier: 75909566

GI number: 75909566

Start: 4180002

End: 4181069

Strand: Direct

Name: rfbU [H]

Synonym: Ava_3360

Alternate gene names: 75909566

Gene position: 4180002-4181069 (Clockwise)

Preceding gene: 75909565

Following gene: 75909570

Centisome position: 65.66

GC content: 37.55

Gene sequence:

>1068_bases
ATGTCTTTATTAATAAACTTATCTTTTGCCCCTCTTCAACCAACAGGCTGGTTAACTTATAGCCTGAATTTGTTGCCGCA
TATTAAATATTTAGGTGTTAATGTTCTCAGTCCCAGGGAAATTCCTGAAGTAAAAGTTTATCAATCTCCAACTAACATTA
CAACAGAATGTGGAATTAAAGGACATTTTCAACGTTTGATGTGGGTGCAGTTTAAATTACCCAGTTTTTATAAAAAACTA
AAGTCTCAATTATTATTTTCACCTATTCCCGAAGTTCCTCTATTTTCCAGATGTCGCAGTATTGTTACTATTCATGATTT
AATCCCTTTAAGATTTCCCCAGGAATTTTCTGCGGCGCAACTTTTTTATTGCCGTAATTATCTACCTGCTGTTATTAAGC
AATCAGAACACATTATTTGTAATTCCTTGAGTACTGCCCATGATATCCAGAATTTTCTAGGTGTTCCAGAAAAGAAGATA
ACTATAACTTCCTTAGCCATTGACACAGAAAATTTTAAGTTTTTGGATTTACCGAAGAAGAATTATTTTTTATATTATGG
GCGACATAATATTTATAAAAATTTAAATCGAATTATTGCCGCTTTTGCTGCGTTACCGAACAAGGATTATGAACTGTGGT
TAGCAGGCCCAAATGATGCACGTTATACCCCGACGTTGCAAGCACAAGTTGAGGAACTAGGGATAACTCATCGTGTGAAG
TTCCTTGATTATGTTTCTTATAGTGAATTACCTGTCATTATTAATCAAGCGATCGCACTTGTTTTCCCCAGTCTTTGGGA
AGGCTTTGGTTTCCCAGTCTTAGAAGCCTTGGCCTGCGGTACTCCTGTCATTACCTCTAACCTCTCTTCCTTACCGGAAG
TGGCGGGAGATGCAGCTATCCTCATCAACCCCTACAACACAGCAGAAATCACAGATGCGATGCAGAACATAGCGAATGAT
GTTAAATTGCAATCCCATTTGTCTACCCAAGGAATCGCCAGAGCCAATCAATTTAGTTGGGAAAGAACAGGTAAAGCAAC
GAGTGAAGTTTTATCTCGTTATCTTTGA

Upstream 100 bases:

>100_bases
AAACGGCTTGTAGATCCTGGTTTATCGTTGTTTGTTATTAGACAGATAGAATATTCAAGATGATGTCGTAGTTTTTTCAA
AAATCAAACATGATTTCTAT

Downstream 100 bases:

>100_bases
ATTAATTAATTAATTCTGGGTTTCAAGCCCCGCTAAATTTTAAATTTAGCAGTCTTCAATGAGTGGCGCTTTCTTACCCC
CATTCATTGTCTTGAATTTT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSLLINLSFAPLQPTGWLTYSLNLLPHIKYLGVNVLSPREIPEVKVYQSPTNITTECGIKGHFQRLMWVQFKLPSFYKKL
KSQLLFSPIPEVPLFSRCRSIVTIHDLIPLRFPQEFSAAQLFYCRNYLPAVIKQSEHIICNSLSTAHDIQNFLGVPEKKI
TITSLAIDTENFKFLDLPKKNYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPNDARYTPTLQAQVEELGITHRVK
FLDYVSYSELPVIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAILINPYNTAEITDAMQNIAND
VKLQSHLSTQGIARANQFSWERTGKATSEVLSRYL

Sequences:

>Translated_355_residues
MSLLINLSFAPLQPTGWLTYSLNLLPHIKYLGVNVLSPREIPEVKVYQSPTNITTECGIKGHFQRLMWVQFKLPSFYKKL
KSQLLFSPIPEVPLFSRCRSIVTIHDLIPLRFPQEFSAAQLFYCRNYLPAVIKQSEHIICNSLSTAHDIQNFLGVPEKKI
TITSLAIDTENFKFLDLPKKNYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPNDARYTPTLQAQVEELGITHRVK
FLDYVSYSELPVIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAILINPYNTAEITDAMQNIAND
VKLQSHLSTQGIARANQFSWERTGKATSEVLSRYL
>Mature_354_residues
SLLINLSFAPLQPTGWLTYSLNLLPHIKYLGVNVLSPREIPEVKVYQSPTNITTECGIKGHFQRLMWVQFKLPSFYKKLK
SQLLFSPIPEVPLFSRCRSIVTIHDLIPLRFPQEFSAAQLFYCRNYLPAVIKQSEHIICNSLSTAHDIQNFLGVPEKKIT
ITSLAIDTENFKFLDLPKKNYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPNDARYTPTLQAQVEELGITHRVKF
LDYVSYSELPVIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAILINPYNTAEITDAMQNIANDV
KLQSHLSTQGIARANQFSWERTGKATSEVLSRYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40143; Mature: 40012

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLINLSFAPLQPTGWLTYSLNLLPHIKYLGVNVLSPREIPEVKVYQSPTNITTECGIK
CEEEEEEEECCCCCCCEEEEEEEHHCCHHHHCCEECCCCCCCCEEEEECCCCCCCCCCCC
GHFQRLMWVQFKLPSFYKKLKSQLLFSPIPEVPLFSRCRSIVTIHDLIPLRFPQEFSAAQ
HHHHHHHHEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFYCRNYLPAVIKQSEHIICNSLSTAHDIQNFLGVPEKKITITSLAIDTENFKFLDLPKK
HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCC
NYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPNDARYTPTLQAQVEELGITHRVK
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
FLDYVSYSELPVIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAI
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCHHHHHHHCCCCEE
LINPYNTAEITDAMQNIANDVKLQSHLSTQGIARANQFSWERTGKATSEVLSRYL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SLLINLSFAPLQPTGWLTYSLNLLPHIKYLGVNVLSPREIPEVKVYQSPTNITTECGIK
EEEEEEEECCCCCCCEEEEEEEHHCCHHHHCCEECCCCCCCCEEEEECCCCCCCCCCCC
GHFQRLMWVQFKLPSFYKKLKSQLLFSPIPEVPLFSRCRSIVTIHDLIPLRFPQEFSAAQ
HHHHHHHHEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFYCRNYLPAVIKQSEHIICNSLSTAHDIQNFLGVPEKKITITSLAIDTENFKFLDLPKK
HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCC
NYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPNDARYTPTLQAQVEELGITHRVK
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
FLDYVSYSELPVIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAI
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCHHHHHHHCCCCEE
LINPYNTAEITDAMQNIANDVKLQSHLSTQGIARANQFSWERTGKATSEVLSRYL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]