Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75909527

Identifier: 75909527

GI number: 75909527

Start: 4142761

End: 4143027

Strand: Direct

Name: 75909527

Synonym: Ava_3321

Alternate gene names: NA

Gene position: 4142761-4143027 (Clockwise)

Preceding gene: 75909526

Following gene: 75909528

Centisome position: 65.08

GC content: 36.7

Gene sequence:

>267_bases
ATGAGTCAAACAGATAAACTACTGGCTAAGATATTATCAGGAACATCAGACAAAAATATTGCCTTTGAGCAGTTGTGTCA
ACTACTAATTAAACTGGGGTTTGACGAGCGCATTCGCGGTAGCTATCATATATATACAAAAGATGGTATGAAAGAAATCT
TGAATCCTCAGCCCAAACAAGGAAAAGCTAAAGCTTATCAGGTCAAGCAAGTTCGTCAAGTAATCCTCAAATATGAACTA
GGAGAAAAAGATGAATCTGCGTTATGA

Upstream 100 bases:

>100_bases
CCATACAGGCGTTAGCAAAGCTTACCAGACGTATAGCTAATCGTGCAATCATAGAATCAGCGTTAGCGCAGCTTACCGAA
GGTATCGCTTATGGTAAATA

Downstream 100 bases:

>100_bases
AATTAATCTCTACTGGAGTGAAGAAGACCAAGAATTTATAGCAGAAGTACCAGAATTACCTGGATGTGTTGCTGATGGTG
AAACTTATCAAGAAGCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSQTDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSYHIYTKDGMKEILNPQPKQGKAKAYQVKQVRQVILKYEL
GEKDESAL

Sequences:

>Translated_88_residues
MSQTDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSYHIYTKDGMKEILNPQPKQGKAKAYQVKQVRQVILKYEL
GEKDESAL
>Mature_87_residues
SQTDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSYHIYTKDGMKEILNPQPKQGKAKAYQVKQVRQVILKYELG
EKDESAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10043; Mature: 9912

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSYHIYTKDGMKEILNPQPKQ
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHCCCCCCC
GKAKAYQVKQVRQVILKYELGEKDESAL
CCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SQTDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSYHIYTKDGMKEILNPQPKQ
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHCCCCCCC
GKAKAYQVKQVRQVILKYELGEKDESAL
CCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA