Click here to switch to the map view.

The map label for this gene is 75909523

Identifier: 75909523

GI number: 75909523

Start: 4141228

End: 4141611

Strand: Direct

Name: 75909523

Synonym: Ava_3317

Alternate gene names: NA

Gene position: 4141228-4141611 (Clockwise)

Preceding gene: 75909522

Following gene: 75909524

Centisome position: 65.06

GC content: 47.4

Gene sequence:

>384_bases
ATGGGACGAAAGTCTTACCCCACAGACTTAACTGATATGGAGTGGGAAATTCTGGCTCCATTGATTCCACCAGCCAAAGA
AGGAGGGCATCCACGCACAACGGATATGCGTGAGATATGCAATGCTATCTACTATCACTTGAAAACGGGATGCCAATGGA
ATATGCTTCCGGGGGACTTTCCACCCAGTTCAACTGTTTACAGTTACTACCGCAAATGGCAGCGCAAAGGAGTCTGGGAA
AAATTAAACCATACACTGCGCGGACAAGTTCGCACAAAACTAGGCAAATCAACGCAACCCACAGCGATCGCCGCAGACAG
TCAGTCGGTCAAAACTGACCAAAAAAAGGGGAAGTGTACGGTTTTGACGGGTGTAAAAAGGTAA

Upstream 100 bases:

>100_bases
GTTGTTGAGAGGCTATTTATAAAGTAAATCTAAAAGTGAGTATAAAAGTAAGCTTGGAGGTATAGGATACATGAAATATA
GTGTATTTACATAGCTACTC

Downstream 100 bases:

>100_bases
AAGGAAGAAAGCGGCAGACTCTAGTTGATAGCCTGGGACTGTTGTTGAAAGTTGTTGTCAGTGAAGCCAATGCGCCGGAA
CGGGTACTTGCTGCCTACGC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Transposase Of; Transposase And Inactivated Derivatives-Like; Transposase Protein; LOW QUALITY PROTEIN Transposase; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase Is4 Family Protein; Transposon; Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Fragment

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MGRKSYPTDLTDMEWEILAPLIPPAKEGGHPRTTDMREICNAIYYHLKTGCQWNMLPGDFPPSSTVYSYYRKWQRKGVWE
KLNHTLRGQVRTKLGKSTQPTAIAADSQSVKTDQKKGKCTVLTGVKR

Sequences:

>Translated_127_residues
MGRKSYPTDLTDMEWEILAPLIPPAKEGGHPRTTDMREICNAIYYHLKTGCQWNMLPGDFPPSSTVYSYYRKWQRKGVWE
KLNHTLRGQVRTKLGKSTQPTAIAADSQSVKTDQKKGKCTVLTGVKR
>Mature_126_residues
GRKSYPTDLTDMEWEILAPLIPPAKEGGHPRTTDMREICNAIYYHLKTGCQWNMLPGDFPPSSTVYSYYRKWQRKGVWEK
LNHTLRGQVRTKLGKSTQPTAIAADSQSVKTDQKKGKCTVLTGVKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14472; Mature: 14341

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKSYPTDLTDMEWEILAPLIPPAKEGGHPRTTDMREICNAIYYHLKTGCQWNMLPGDF
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC
PPSSTVYSYYRKWQRKGVWEKLNHTLRGQVRTKLGKSTQPTAIAADSQSVKTDQKKGKCT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCCEE
VLTGVKR
EECCCCC
>Mature Secondary Structure 
GRKSYPTDLTDMEWEILAPLIPPAKEGGHPRTTDMREICNAIYYHLKTGCQWNMLPGDF
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC
PPSSTVYSYYRKWQRKGVWEKLNHTLRGQVRTKLGKSTQPTAIAADSQSVKTDQKKGKCT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCCEE
VLTGVKR
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA