| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909516
Identifier: 75909516
GI number: 75909516
Start: 4131150
End: 4131716
Strand: Direct
Name: 75909516
Synonym: Ava_3309
Alternate gene names: NA
Gene position: 4131150-4131716 (Clockwise)
Preceding gene: 75909514
Following gene: 75909518
Centisome position: 64.9
GC content: 42.15
Gene sequence:
>567_bases ATGCTTAAATCAATTTCTAGTGTGGCAATGACATTGATCGGATTCAGCACTAGTCTAATGTTCCCTCACATTGCAGTTGC TGAAGAGATTTCCTGCCAAAGAAGTTTAGGTGCAATCACCGTTGATAATGTGAAAGTACCTCAAGGTAAAACCTGCACTC TCACTGGAACTACTGTCAAAGGAAATATAGTAGTCGAAGGCAGCGCAACTCTCAAGGCCATAGGTGCGAAAGTCAATGGT AGTATTCAGGCAGAGGGTGCAAGTCTAGTCGATGTAAATTCTAATACTACTGTTGGTGGAAGCATCCAAGTGAAACAGGG TCGTGCGGCTCGTGTGGTGAGTACACGCATCAATGGAGATGTGCAGTTAGAGTCGAACTCAAGACAAATAGTTGCTAATC AAAACCAAATTGGCGGCAATTTACAAGTCTTTCAAAATACTGGAGGGGTAATGATTCAGCGAAATCGCATTAACGGCAAT TTGCAGTGTAAAGAAAATACTCCTCAGCCGATTGGTGGTGACAATATTGTCCAAGGTAGTAAAGAAGATCAGTGTGCAAG ATTATAA
Upstream 100 bases:
>100_bases TAGCTGATTCATGAGTTTTTTCTCATCAATTATTTAAATATTTTTCATGCTTCTGTATGACATTAATAACTATCAACTTT TACCGCAACCTTAACCAGTT
Downstream 100 bases:
>100_bases GAAGTTAGTTACTGTAATTCCTGATTAGCAAACTTTGCTCCACTCTACTCTCATTCAAAAAAGGGAATAGATTCGTATGT AATACTCCATACCACGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRSLGAITVDNVKVPQGKTCTLTGTTVKGNIVVEGSATLKAIGAKVNG SIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTRINGDVQLESNSRQIVANQNQIGGNLQVFQNTGGVMIQRNRINGN LQCKENTPQPIGGDNIVQGSKEDQCARL
Sequences:
>Translated_188_residues MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRSLGAITVDNVKVPQGKTCTLTGTTVKGNIVVEGSATLKAIGAKVNG SIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTRINGDVQLESNSRQIVANQNQIGGNLQVFQNTGGVMIQRNRINGN LQCKENTPQPIGGDNIVQGSKEDQCARL >Mature_188_residues MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRSLGAITVDNVKVPQGKTCTLTGTTVKGNIVVEGSATLKAIGAKVNG SIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTRINGDVQLESNSRQIVANQNQIGGNLQVFQNTGGVMIQRNRINGN LQCKENTPQPIGGDNIVQGSKEDQCARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19650; Mature: 19650
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRSLGAITVDNVKVPQGKTCTLTGTTVK CCCCHHHHHHHHHHCCHHHCCCEEEHHHHHHHHHCCCEEEECCEECCCCCEEEEECCEEE GNIVVEGSATLKAIGAKVNGSIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTRINGD CCEEEECCCEEEEECEECCCEEEECCCEEEEECCCCEECCEEEECCCCEEEEEEEECCCE VQLESNSRQIVANQNQIGGNLQVFQNTGGVMIQRNRINGNLQCKENTPQPIGGDNIVQGS EEEECCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCC KEDQCARL CCCCCCCC >Mature Secondary Structure MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRSLGAITVDNVKVPQGKTCTLTGTTVK CCCCHHHHHHHHHHCCHHHCCCEEEHHHHHHHHHCCCEEEECCEECCCCCEEEEECCEEE GNIVVEGSATLKAIGAKVNGSIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTRINGD CCEEEECCCEEEEECEECCCEEEECCCEEEEECCCCEECCEEEECCCCEEEEEEEECCCE VQLESNSRQIVANQNQIGGNLQVFQNTGGVMIQRNRINGNLQCKENTPQPIGGDNIVQGS EEEECCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCC KEDQCARL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA