| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75909483
Identifier: 75909483
GI number: 75909483
Start: 4086415
End: 4086723
Strand: Direct
Name: 75909483
Synonym: Ava_3276
Alternate gene names: NA
Gene position: 4086415-4086723 (Clockwise)
Preceding gene: 75909472
Following gene: 75909485
Centisome position: 64.19
GC content: 44.34
Gene sequence:
>309_bases GTGGGACGAGAACTTTACTTCCGCATTAAAGCCGAAGAACCAAGTTTCACCGATTGTGACAAAGAATTTTCTCAAGGAAC TGAAGCTCAAACAGGCAGATTGCTAGGCCCAGTTCCCATCAGCCAAGCGCATCCGGCGATCGCACAGAAACTAGCAATAT CGCAACCAGGGCAGTTATGGCCGCCATATCGATTGGATAACTGGGTAGTAATTGTACGCTTGGGAAAGTTAATTTCCGCC CAGTTAGATGATGTAGCTAGAAACTCATTACTCAATCATTTATTTGAACAGCAAACAATTGTAGGTTAG
Upstream 100 bases:
>100_bases GCCCGCTTTCATCTTAAAACCCTTGTGAGTTAACACTTACAAGGGTTTTTCGTAGTTAGACAAAGTAACTTATTCATTAA TTTGTATATCCGATGCAGAA
Downstream 100 bases:
>100_bases GTAAAGGATTTGCGTAACACAACACCCTTGTATCTGTTGGGTTGTGCTGCGCTCCATCCAACCTACGTCTAATTACTCTG CTTCTTCATCAATTACTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MGRELYFRIKAEEPSFTDCDKEFSQGTEAQTGRLLGPVPISQAHPAIAQKLAISQPGQLWPPYRLDNWVVIVRLGKLISA QLDDVARNSLLNHLFEQQTIVG
Sequences:
>Translated_102_residues MGRELYFRIKAEEPSFTDCDKEFSQGTEAQTGRLLGPVPISQAHPAIAQKLAISQPGQLWPPYRLDNWVVIVRLGKLISA QLDDVARNSLLNHLFEQQTIVG >Mature_101_residues GRELYFRIKAEEPSFTDCDKEFSQGTEAQTGRLLGPVPISQAHPAIAQKLAISQPGQLWPPYRLDNWVVIVRLGKLISAQ LDDVARNSLLNHLFEQQTIVG
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11429; Mature: 11298
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRELYFRIKAEEPSFTDCDKEFSQGTEAQTGRLLGPVPISQAHPAIAQKLAISQPGQLW CCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCC PPYRLDNWVVIVRLGKLISAQLDDVARNSLLNHLFEQQTIVG CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRELYFRIKAEEPSFTDCDKEFSQGTEAQTGRLLGPVPISQAHPAIAQKLAISQPGQLW CCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCC PPYRLDNWVVIVRLGKLISAQLDDVARNSLLNHLFEQQTIVG CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA