| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909417
Identifier: 75909417
GI number: 75909417
Start: 3990410
End: 3991900
Strand: Direct
Name: 75909417
Synonym: Ava_3210
Alternate gene names: NA
Gene position: 3990410-3991900 (Clockwise)
Preceding gene: 75909416
Following gene: 75909419
Centisome position: 62.69
GC content: 44.06
Gene sequence:
>1491_bases ATGACTACCAAACCCTTTCTCCAACCACTAGATCGCGTGGCGATCGCTCTCATGTTAATTTTGAGTTTGTTGATTGGACT GCTAATCTTACAAGGTGATGTGGTTGCTTCTCGTGTACGCAGTTTTACATGGGAAAATCAACAAATCGGCGCAGAAGACA CCTCGTTTGCTGTCACCTTTAGCCGTCCAATGGATATCAAAAGCGTAGAAGATAACTTAAAAATCGAACCGCCTTTAGCA GGGAAATTCAGTTGGGCAGGGCGAAGGATGGTTTATACTCTGCTGACACCAGCTCCTTATGGGACAAATTATAAATTACA GTTGCAGGGCGCTAAAGATAGATTTGCCGAAAAAGAACAAACAAATCGGGTAATCCAGCCCTTTACTAGTCAATTTCGTA CACGCGATCGCGTCATTCTCTACATTGGCGCCGATCAAGAAAACCAAGGACAGCTAGTACTGTACAACTTATCTCTAGAA CAGAAAAAGGTACTTAGTCCCAAAGACTTAGTTGTGATGGATTTTAAACCATTTCCCAATGGAGAAAAAATCTTATTCTC GGCTCGCGCTGCCAACAATCAAGACTTACTTTCAGCGCAATTGTACACAGTCACAACCGGAATCAGCACCAAATCTGATA CACCAGCAGAACCAGCAGGGAAAATCGACTTACTTTTAGATAATAAAGACTATCAAAACCTGAAATTCGACCTATCCCCC AATGGCGAAACTATTGTGATTCAACGGGGAAATAGAAACAACCCTAGTGACTTTGGTCTGTGGTTTATCTCCGCTACCAG CAACTCAGGACAAAGACCCGTCCCACAACGTCTGCAAAGCCAGCCTGGGGGAGATTTCATGATTACCCCTGACAGTAAAG CCGTAGCCGTTGCCCAAGGGCAAGGAGCCGCCATTCTACCACTACAAAAAGATGCCAGCAAACCCCTAGATTTTCTGCCC CAATTTGGACTGGTACAGGCATTCTCCAAAGATGGCTCTCAAGCAGCAATGGTGAAATTTAATACAGATTTCACAAAAGA ATTATTTTTAGTCACAAATCAAGGTGTCCAAAAACCCTTATTGAAAACCACAGGTTCCATCCTCAGTTGCCAATTTGATC CAGCCTTACCCACCCTTTATTGCTTACTCACACAGCTTGTATCCCAAGAACAGTACATAGAACAGCCTTATTTAGTCGCC ATCGACCTGAAAACAGGACAGCAAAAACCATTGCTGGTGCTACCCATAGAACAAAGAAACGTGCAAATGAGCCTATCACC AGATGGTTTAGGCTTGTTATTTGACCAAGTAGTTCCCCAGAGCAATCCTAATGCACCTACAACCAGAGAATTAAAAACAG ATGATGGTGAAGCGATCGCCACCAGTAATCTTTGGCTAATGCCCCTACTACCCATTTCTGACACAGCCATCAGTACCATC AGACCAGAAAAGCTACCCTTCATCGGATTTCATCCCCGTTGGCTACCGTGA
Upstream 100 bases:
>100_bases GCCACCTCCATCAAAAAGATTCCCCAACCAGCAAATCCATATAGTTATTAGTCAATAGTCCACAACGAACAACTGACAAC GAACAACTGACAACTGACCA
Downstream 100 bases:
>100_bases AGCAGGATGTGAGGGCAGGACTGTTTCATTCTGGGAAGAAAACTTGGTATTGGGAATCGTTAGCATCGGATTAAGGATGT TGTTTTTGATGAAGATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MTTKPFLQPLDRVAIALMLILSLLIGLLILQGDVVASRVRSFTWENQQIGAEDTSFAVTFSRPMDIKSVEDNLKIEPPLA GKFSWAGRRMVYTLLTPAPYGTNYKLQLQGAKDRFAEKEQTNRVIQPFTSQFRTRDRVILYIGADQENQGQLVLYNLSLE QKKVLSPKDLVVMDFKPFPNGEKILFSARAANNQDLLSAQLYTVTTGISTKSDTPAEPAGKIDLLLDNKDYQNLKFDLSP NGETIVIQRGNRNNPSDFGLWFISATSNSGQRPVPQRLQSQPGGDFMITPDSKAVAVAQGQGAAILPLQKDASKPLDFLP QFGLVQAFSKDGSQAAMVKFNTDFTKELFLVTNQGVQKPLLKTTGSILSCQFDPALPTLYCLLTQLVSQEQYIEQPYLVA IDLKTGQQKPLLVLPIEQRNVQMSLSPDGLGLLFDQVVPQSNPNAPTTRELKTDDGEAIATSNLWLMPLLPISDTAISTI RPEKLPFIGFHPRWLP
Sequences:
>Translated_496_residues MTTKPFLQPLDRVAIALMLILSLLIGLLILQGDVVASRVRSFTWENQQIGAEDTSFAVTFSRPMDIKSVEDNLKIEPPLA GKFSWAGRRMVYTLLTPAPYGTNYKLQLQGAKDRFAEKEQTNRVIQPFTSQFRTRDRVILYIGADQENQGQLVLYNLSLE QKKVLSPKDLVVMDFKPFPNGEKILFSARAANNQDLLSAQLYTVTTGISTKSDTPAEPAGKIDLLLDNKDYQNLKFDLSP NGETIVIQRGNRNNPSDFGLWFISATSNSGQRPVPQRLQSQPGGDFMITPDSKAVAVAQGQGAAILPLQKDASKPLDFLP QFGLVQAFSKDGSQAAMVKFNTDFTKELFLVTNQGVQKPLLKTTGSILSCQFDPALPTLYCLLTQLVSQEQYIEQPYLVA IDLKTGQQKPLLVLPIEQRNVQMSLSPDGLGLLFDQVVPQSNPNAPTTRELKTDDGEAIATSNLWLMPLLPISDTAISTI RPEKLPFIGFHPRWLP >Mature_495_residues TTKPFLQPLDRVAIALMLILSLLIGLLILQGDVVASRVRSFTWENQQIGAEDTSFAVTFSRPMDIKSVEDNLKIEPPLAG KFSWAGRRMVYTLLTPAPYGTNYKLQLQGAKDRFAEKEQTNRVIQPFTSQFRTRDRVILYIGADQENQGQLVLYNLSLEQ KKVLSPKDLVVMDFKPFPNGEKILFSARAANNQDLLSAQLYTVTTGISTKSDTPAEPAGKIDLLLDNKDYQNLKFDLSPN GETIVIQRGNRNNPSDFGLWFISATSNSGQRPVPQRLQSQPGGDFMITPDSKAVAVAQGQGAAILPLQKDASKPLDFLPQ FGLVQAFSKDGSQAAMVKFNTDFTKELFLVTNQGVQKPLLKTTGSILSCQFDPALPTLYCLLTQLVSQEQYIEQPYLVAI DLKTGQQKPLLVLPIEQRNVQMSLSPDGLGLLFDQVVPQSNPNAPTTRELKTDDGEAIATSNLWLMPLLPISDTAISTIR PEKLPFIGFHPRWLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54997; Mature: 54866
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKPFLQPLDRVAIALMLILSLLIGLLILQGDVVASRVRSFTWENQQIGAEDTSFAVTF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE SRPMDIKSVEDNLKIEPPLAGKFSWAGRRMVYTLLTPAPYGTNYKLQLQGAKDRFAEKEQ CCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHH TNRVIQPFTSQFRTRDRVILYIGADQENQGQLVLYNLSLEQKKVLSPKDLVVMDFKPFPN HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHCCCCCCEEEEEECCCCC GEKILFSARAANNQDLLSAQLYTVTTGISTKSDTPAEPAGKIDLLLDNKDYQNLKFDLSP CCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC NGETIVIQRGNRNNPSDFGLWFISATSNSGQRPVPQRLQSQPGGDFMITPDSKAVAVAQG CCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCEEECCCCCEEEEECC QGAAILPLQKDASKPLDFLPQFGLVQAFSKDGSQAAMVKFNTDFTKELFLVTNQGVQKPL CCCEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCHH LKTTGSILSCQFDPALPTLYCLLTQLVSQEQYIEQPYLVAIDLKTGQQKPLLVLPIEQRN HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCC VQMSLSPDGLGLLFDQVVPQSNPNAPTTRELKTDDGEAIATSNLWLMPLLPISDTAISTI EEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEECCCCCHHHCC RPEKLPFIGFHPRWLP CCCCCCEECCCCCCCC >Mature Secondary Structure TTKPFLQPLDRVAIALMLILSLLIGLLILQGDVVASRVRSFTWENQQIGAEDTSFAVTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE SRPMDIKSVEDNLKIEPPLAGKFSWAGRRMVYTLLTPAPYGTNYKLQLQGAKDRFAEKEQ CCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHH TNRVIQPFTSQFRTRDRVILYIGADQENQGQLVLYNLSLEQKKVLSPKDLVVMDFKPFPN HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHCCCCCCEEEEEECCCCC GEKILFSARAANNQDLLSAQLYTVTTGISTKSDTPAEPAGKIDLLLDNKDYQNLKFDLSP CCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC NGETIVIQRGNRNNPSDFGLWFISATSNSGQRPVPQRLQSQPGGDFMITPDSKAVAVAQG CCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCEEECCCCCEEEEECC QGAAILPLQKDASKPLDFLPQFGLVQAFSKDGSQAAMVKFNTDFTKELFLVTNQGVQKPL CCCEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCHH LKTTGSILSCQFDPALPTLYCLLTQLVSQEQYIEQPYLVAIDLKTGQQKPLLVLPIEQRN HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCC VQMSLSPDGLGLLFDQVVPQSNPNAPTTRELKTDDGEAIATSNLWLMPLLPISDTAISTI EEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEECCCCCHHHCC RPEKLPFIGFHPRWLP CCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA