Click here to switch to the map view.

The map label for this gene is 75909327

Identifier: 75909327

GI number: 75909327

Start: 3875098

End: 3876390

Strand: Direct

Name: 75909327

Synonym: Ava_3120

Alternate gene names: NA

Gene position: 3875098-3876390 (Clockwise)

Preceding gene: 75909326

Following gene: 75909328

Centisome position: 60.87

GC content: 42.23

Gene sequence:

>1293_bases
ATGAAAATTATCGCCTACACTTACACTGACCCTCTACTAGAAACCTCTCCTGTGCAGATTAATTGGGAGTGGGAGGTGGA
ACGGGTGTATGCGGATTTAGGACAGCGCTCAGAATTGCAGCAATTATTTACTGATTGTCAAGCTGAATCTTGTGATTATT
TAATTGTGAGGCGTTTGGAAGAATTGGGGGATAATTTAGAGGAGGTAAGCGATCGCCTTAATCAGTTAGAAGCGATGAGT
ATAGGCATCATCGCTATAGAACAAGCCTACAATTCAGAAACTTCTCATCTGCGGGCTGATTTGCTGAGATTGTTACAGGA
AATTCAACGCCAACATCGTAGTCGTCGCATTCGTCAAGGACACGCCCGTAATCGTCTGGATGCTGCACCACCTCCCGGTA
AAGCACCTTATGGCTATCGCAGAGGTAAAGATAAATATATTCTCGACCGCAGTACTTCCCCAGTCGTGAAGGATTTTTTT
GATAACTTTTTACTCTATAGTTCTCTGCGTGGTGCAGTTCGTTATTTAGCTAAAAAATACGGCAAGAAAATCTCAGTCAC
CACTGGTAAGCGTTGGTTAACTAATCCTGTTTATCGTGGGGACACCGCTTATCAAAATCGGGAAATTATCTCTGATACTC
ATATTCCCATTATTTCTAGAGACGAAGCTGCCCAAGTTGACCGACTTCTACGCCGCAATAGCCGCTTACCTTCCCGCAGT
GCTAGCGCCCCCCGTTCTCTAGCTGGGTTGGTTGTTTGTCAGCAGTGTCAGTCACACATGACAGTTACCCGTGTCACCCA
ACGCCATCAAGATAAAGAGTATCTTTATTTACGTCCCATCAAGTGTCCCCAAAGCCCCAAGTGTCGGGCTATTCCTTACC
AAGAGATTTTGGCACAGACAATTACCAAGGTTTGCAGTGAATTACCTTTGGCGGTAGCAGGGATGAATTTTCCCCAATTG
GATAATGTTAAGAATAGTTTAAAAGCAGCGATCGCTCATCAACAAAATATACTGCAACAATTACCTAATCTGGTAGAAAC
TGGTATTTTAGACACAGAAACAGCCAAGTTAAGAACTTACAAACTCCGTACAGAAATTTCTACACTACAAGCAAAATTAG
CAACCCTTCCTCCGGTAAATTTGCTATCTGTTGCTCAGGCAGTTTCTATACCTCAATTTTGGTTAGATTTATCAGAATCC
GAGCGCAGATTTTACTTGCGAGAATTTATCCGGCAAATTGAAATTATTCGTCAAAATCAACACTGGGATTTACAAGTAAT
TTTTATTTTTTAG

Upstream 100 bases:

>100_bases
CCCAGATGGGAATATTATCGAATTGAGTCAGCAGTGATTGTTAACGGTCAACTGACAACTGACAATTGACAACTGACAAC
TGACAACTGACAACTAACTA

Downstream 100 bases:

>100_bases
TCAGTCAACACTCAACACTCAAGAGTTTTTCTTTCCTATACCCTGACTCTAGTCACCATTTTTACCAAAAGTTTGTATCA
TTTTAAAATGACAGAAATTA

Product: recombinase

Products: NA

Alternate protein names: Resolvase Family Site-Specific Recombinase; Recombinase Family; Recombinase Family Protein

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKIIAYTYTDPLLETSPVQINWEWEVERVYADLGQRSELQQLFTDCQAESCDYLIVRRLEELGDNLEEVSDRLNQLEAMS
IGIIAIEQAYNSETSHLRADLLRLLQEIQRQHRSRRIRQGHARNRLDAAPPPGKAPYGYRRGKDKYILDRSTSPVVKDFF
DNFLLYSSLRGAVRYLAKKYGKKISVTTGKRWLTNPVYRGDTAYQNREIISDTHIPIISRDEAAQVDRLLRRNSRLPSRS
ASAPRSLAGLVVCQQCQSHMTVTRVTQRHQDKEYLYLRPIKCPQSPKCRAIPYQEILAQTITKVCSELPLAVAGMNFPQL
DNVKNSLKAAIAHQQNILQQLPNLVETGILDTETAKLRTYKLRTEISTLQAKLATLPPVNLLSVAQAVSIPQFWLDLSES
ERRFYLREFIRQIEIIRQNQHWDLQVIFIF

Sequences:

>Translated_430_residues
MKIIAYTYTDPLLETSPVQINWEWEVERVYADLGQRSELQQLFTDCQAESCDYLIVRRLEELGDNLEEVSDRLNQLEAMS
IGIIAIEQAYNSETSHLRADLLRLLQEIQRQHRSRRIRQGHARNRLDAAPPPGKAPYGYRRGKDKYILDRSTSPVVKDFF
DNFLLYSSLRGAVRYLAKKYGKKISVTTGKRWLTNPVYRGDTAYQNREIISDTHIPIISRDEAAQVDRLLRRNSRLPSRS
ASAPRSLAGLVVCQQCQSHMTVTRVTQRHQDKEYLYLRPIKCPQSPKCRAIPYQEILAQTITKVCSELPLAVAGMNFPQL
DNVKNSLKAAIAHQQNILQQLPNLVETGILDTETAKLRTYKLRTEISTLQAKLATLPPVNLLSVAQAVSIPQFWLDLSES
ERRFYLREFIRQIEIIRQNQHWDLQVIFIF
>Mature_430_residues
MKIIAYTYTDPLLETSPVQINWEWEVERVYADLGQRSELQQLFTDCQAESCDYLIVRRLEELGDNLEEVSDRLNQLEAMS
IGIIAIEQAYNSETSHLRADLLRLLQEIQRQHRSRRIRQGHARNRLDAAPPPGKAPYGYRRGKDKYILDRSTSPVVKDFF
DNFLLYSSLRGAVRYLAKKYGKKISVTTGKRWLTNPVYRGDTAYQNREIISDTHIPIISRDEAAQVDRLLRRNSRLPSRS
ASAPRSLAGLVVCQQCQSHMTVTRVTQRHQDKEYLYLRPIKCPQSPKCRAIPYQEILAQTITKVCSELPLAVAGMNFPQL
DNVKNSLKAAIAHQQNILQQLPNLVETGILDTETAKLRTYKLRTEISTLQAKLATLPPVNLLSVAQAVSIPQFWLDLSES
ERRFYLREFIRQIEIIRQNQHWDLQVIFIF

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49665; Mature: 49665

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIAYTYTDPLLETSPVQINWEWEVERVYADLGQRSELQQLFTDCQAESCDYLIVRRLE
CEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
ELGDNLEEVSDRLNQLEAMSIGIIAIEQAYNSETSHLRADLLRLLQEIQRQHRSRRIRQG
HHCCCHHHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARNRLDAAPPPGKAPYGYRRGKDKYILDRSTSPVVKDFFDNFLLYSSLRGAVRYLAKKY
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKKISVTTGKRWLTNPVYRGDTAYQNREIISDTHIPIISRDEAAQVDRLLRRNSRLPSRS
CCEEEEECCCHHHCCCCCCCCCCCCCCCHHCCCCCCEECCCHHHHHHHHHHHCCCCCCCC
ASAPRSLAGLVVCQQCQSHMTVTRVTQRHQDKEYLYLRPIKCPQSPKCRAIPYQEILAQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
ITKVCSELPLAVAGMNFPQLDNVKNSLKAAIAHQQNILQQLPNLVETGILDTETAKLRTY
HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KLRTEISTLQAKLATLPPVNLLSVAQAVSIPQFWLDLSESERRFYLREFIRQIEIIRQNQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
HWDLQVIFIF
CCCEEEEEEC
>Mature Secondary Structure
MKIIAYTYTDPLLETSPVQINWEWEVERVYADLGQRSELQQLFTDCQAESCDYLIVRRLE
CEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
ELGDNLEEVSDRLNQLEAMSIGIIAIEQAYNSETSHLRADLLRLLQEIQRQHRSRRIRQG
HHCCCHHHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARNRLDAAPPPGKAPYGYRRGKDKYILDRSTSPVVKDFFDNFLLYSSLRGAVRYLAKKY
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKKISVTTGKRWLTNPVYRGDTAYQNREIISDTHIPIISRDEAAQVDRLLRRNSRLPSRS
CCEEEEECCCHHHCCCCCCCCCCCCCCCHHCCCCCCEECCCHHHHHHHHHHHCCCCCCCC
ASAPRSLAGLVVCQQCQSHMTVTRVTQRHQDKEYLYLRPIKCPQSPKCRAIPYQEILAQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
ITKVCSELPLAVAGMNFPQLDNVKNSLKAAIAHQQNILQQLPNLVETGILDTETAKLRTY
HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KLRTEISTLQAKLATLPPVNLLSVAQAVSIPQFWLDLSESERRFYLREFIRQIEIIRQNQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
HWDLQVIFIF
CCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA