Click here to switch to the map view.

The map label for this gene is 75909276

Identifier: 75909276

GI number: 75909276

Start: 3807990

End: 3808592

Strand: Direct

Name: 75909276

Synonym: Ava_3068

Alternate gene names: NA

Gene position: 3807990-3808592 (Clockwise)

Preceding gene: 75909275

Following gene: 75909277

Centisome position: 59.82

GC content: 44.44

Gene sequence:

>603_bases
ATGAAATCCCTGCACCGTCCTGATCTATATAGCTGGTCTACTTTCAACCCTGCAAGAAATATTGATTTCAATGGGTTTGC
CTGGATTCGCCCTGAAGGCAATATATTGATTGATCCAGTAGCTTTATCAAATCATGATTGGAAGCACTTGGAATCTCTCG
GTGGAGTGGTGTGGATTGTCCTGACAAACTCTGATCATGTGAGGTCAGCGAAGGAAATTGCCGACCAAACCTATACCAAA
ATAGCTGGGCCGGTCGCAGAGAAAGAAAATTTTCCTATATATTGCGATCGCTGGTTATCTGATGGTGATGAACTTGTACC
AGGATTAAAGGTAATGGAACTCCAAGGTTCTAAAACTCCCGGAGAGCTAGCATTGCTGTTGGAAGAAACAACCTTAATTA
CAGGGGATTTAGTCCGGGCATATCGAGCAGGGGGTTTGGAGATATTACCTGATGAAAAGCTGATGAATAAGCAAAAAGTC
GTGGCTTCAGTCCGCAGATTAGCCGCATTGGAGAAGGTAGAAGCTGTGTTAGTAGGAGATGGTTGGTCTGTGTTTCGGGA
TGGACGCGATCGCCTCAAAGAACTTGTAGCAACTTTGGCATAA

Upstream 100 bases:

>100_bases
CTTTACATTCTTATTTTTGAACTAAAGACGGAATTATTGATAAATTAAGGATGCTGATTGATCAACCGAAAGCTTTTGAA
GGTATAGAACCAGAATTATT

Downstream 100 bases:

>100_bases
ATTTAGAGGCAATCAACTACGCCATCGCTCTTCATTTAGAATCTGTCTTGAGAAAGAGTATTATTTTTTACAAAAAAATA
TACTGTAGAAATTAATGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKSLHRPDLYSWSTFNPARNIDFNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIVLTNSDHVRSAKEIADQTYTK
IAGPVAEKENFPIYCDRWLSDGDELVPGLKVMELQGSKTPGELALLLEETTLITGDLVRAYRAGGLEILPDEKLMNKQKV
VASVRRLAALEKVEAVLVGDGWSVFRDGRDRLKELVATLA

Sequences:

>Translated_200_residues
MKSLHRPDLYSWSTFNPARNIDFNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIVLTNSDHVRSAKEIADQTYTK
IAGPVAEKENFPIYCDRWLSDGDELVPGLKVMELQGSKTPGELALLLEETTLITGDLVRAYRAGGLEILPDEKLMNKQKV
VASVRRLAALEKVEAVLVGDGWSVFRDGRDRLKELVATLA
>Mature_200_residues
MKSLHRPDLYSWSTFNPARNIDFNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIVLTNSDHVRSAKEIADQTYTK
IAGPVAEKENFPIYCDRWLSDGDELVPGLKVMELQGSKTPGELALLLEETTLITGDLVRAYRAGGLEILPDEKLMNKQKV
VASVRRLAALEKVEAVLVGDGWSVFRDGRDRLKELVATLA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22321; Mature: 22321

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLHRPDLYSWSTFNPARNIDFNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHCCCEEEEE
LTNSDHVRSAKEIADQTYTKIAGPVAEKENFPIYCDRWLSDGDELVPGLKVMELQGSKTP
EECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCHHCCCEEEEEECCCCCC
GELALLLEETTLITGDLVRAYRAGGLEILPDEKLMNKQKVVASVRRLAALEKVEAVLVGD
CCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEC
GWSVFRDGRDRLKELVATLA
CHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MKSLHRPDLYSWSTFNPARNIDFNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHCCCEEEEE
LTNSDHVRSAKEIADQTYTKIAGPVAEKENFPIYCDRWLSDGDELVPGLKVMELQGSKTP
EECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCHHCCCEEEEEECCCCCC
GELALLLEETTLITGDLVRAYRAGGLEILPDEKLMNKQKVVASVRRLAALEKVEAVLVGD
CCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEC
GWSVFRDGRDRLKELVATLA
CHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA