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The map label for this gene is ugpB [C]

Identifier: 75909251

GI number: 75909251

Start: 3765632

End: 3766852

Strand: Direct

Name: ugpB [C]

Synonym: Ava_3042

Alternate gene names: 75909251

Gene position: 3765632-3766852 (Clockwise)

Preceding gene: 75909248

Following gene: 75909252

Centisome position: 59.15

GC content: 43.08

Gene sequence:

>1221_bases
ATGGCGATCGCGATCGCCATTGTTGCTTACCATAGTTGGCAAATACAGAGTTCGCCTTCAGCATCTGCCCCAGTCACTGT
TAAACTCAGTGGCTGGGGTGGTTCTCCGGTTGAGCAAAAACTATTGAAACAGGTTTTACAAGACTTTGAAGCACAGCATC
CTCTGATCAAGGTCAAATACGAGGTGATTTCTGACCAATACATGGACGTGATCAAAACCCGCTTGATTGGAGAAGCTGCC
CCTGATGTCTTCTACTTGGATGCTCTGGAGGCTCCTTTTTTGATGAGCCAGAATGTGCTGGAACCATTAGAAAGTTACAT
CACTCCCGCATTTGACTTAAGTGACTTTGAAACCAATCTCCTAGATAGCTTTAAATACCAGAACCATATTTACGGTTTCC
CTAAGGACTATTCCACTTTGGCGCTGTTTTATAACAAAAAAGCCTTTGCTGCTGCTGGTTTGAGCAGCCCCCCTGCGACA
TGGCAAGAATTACGCACCTACTCCCGAAAATTAACAGGTAAACTCAACAAGTATGGCTTTGGGGAAGCACCGGAATTAGC
TCGCCAAGTTTACAAAATTAAAGCTTTTGGTGGAGAAGTTATCAATCAAAATGGTCATGCTACCTTTGCGAGTGAAGCTG
GTTTACGGGGATTGCAATTAGTGATAGACCAGTATCAAAAAGATAAATCATCTGCTCAAAAATCTGACGTAGGGACAAAC
TCAGGTAGCGAAATGTTTGGTCAGGAGAAAGTGGCAATGGTAATTGAAGGTAATTGGGCAATTCCATACTTACAAGAAAC
CTTTCCGCAATTGGAGTTTGCAACTGCACAATTACCAACGATTAATCAAAAAAAAGGCACAATGGTATTCACTGTTGCCT
ATGTCATGAGTAAGCAATCACAGCATAAAGCTGAAGCATGGGAGTTAATTTCCTATCTCACAGGTAAAGCCGGAATGCAG
AAATGGACAAGTACAGGCTTTGCTTTACCTACACGCAAATCAGTATCCCAAAAACTAGGATATGAGCAAGATCCCTTGCG
ATCGCCTTTAGTTGCCGGTGTTGATGATGCTACACCCTGGCAGGTTGGTAAATACCCAGCCCCAATTGTGAACAATTTTG
ATAATCAATTTGTCAGTGCCTTACTAGGACAACAACCATTAAAACAGGCGATGCTCAGGGCGCAGAATCAGGCAAATAAG
CAAATTCAAGCAATGGAGTGA

Upstream 100 bases:

>100_bases
TAGTCAGTAGTCAGTAGTTATCTTTCCCATATCCCTGCTTCTTCCCTATCCTCTATCTCTGGCGATGAAAAAAAGTTGGT
GGCAATTTTTGGGATTAGTG

Downstream 100 bases:

>100_bases
AGCAGGGAAGCAGGGAATTGTGGACTGAGAACTAAACTGCTACGTACAGACGTTGCTGTGCAGCATCTCTATTGAATACT
TGGTAGCGATCACCACCAAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MAIAIAIVAYHSWQIQSSPSASAPVTVKLSGWGGSPVEQKLLKQVLQDFEAQHPLIKVKYEVISDQYMDVIKTRLIGEAA
PDVFYLDALEAPFLMSQNVLEPLESYITPAFDLSDFETNLLDSFKYQNHIYGFPKDYSTLALFYNKKAFAAAGLSSPPAT
WQELRTYSRKLTGKLNKYGFGEAPELARQVYKIKAFGGEVINQNGHATFASEAGLRGLQLVIDQYQKDKSSAQKSDVGTN
SGSEMFGQEKVAMVIEGNWAIPYLQETFPQLEFATAQLPTINQKKGTMVFTVAYVMSKQSQHKAEAWELISYLTGKAGMQ
KWTSTGFALPTRKSVSQKLGYEQDPLRSPLVAGVDDATPWQVGKYPAPIVNNFDNQFVSALLGQQPLKQAMLRAQNQANK
QIQAME

Sequences:

>Translated_406_residues
MAIAIAIVAYHSWQIQSSPSASAPVTVKLSGWGGSPVEQKLLKQVLQDFEAQHPLIKVKYEVISDQYMDVIKTRLIGEAA
PDVFYLDALEAPFLMSQNVLEPLESYITPAFDLSDFETNLLDSFKYQNHIYGFPKDYSTLALFYNKKAFAAAGLSSPPAT
WQELRTYSRKLTGKLNKYGFGEAPELARQVYKIKAFGGEVINQNGHATFASEAGLRGLQLVIDQYQKDKSSAQKSDVGTN
SGSEMFGQEKVAMVIEGNWAIPYLQETFPQLEFATAQLPTINQKKGTMVFTVAYVMSKQSQHKAEAWELISYLTGKAGMQ
KWTSTGFALPTRKSVSQKLGYEQDPLRSPLVAGVDDATPWQVGKYPAPIVNNFDNQFVSALLGQQPLKQAMLRAQNQANK
QIQAME
>Mature_405_residues
AIAIAIVAYHSWQIQSSPSASAPVTVKLSGWGGSPVEQKLLKQVLQDFEAQHPLIKVKYEVISDQYMDVIKTRLIGEAAP
DVFYLDALEAPFLMSQNVLEPLESYITPAFDLSDFETNLLDSFKYQNHIYGFPKDYSTLALFYNKKAFAAAGLSSPPATW
QELRTYSRKLTGKLNKYGFGEAPELARQVYKIKAFGGEVINQNGHATFASEAGLRGLQLVIDQYQKDKSSAQKSDVGTNS
GSEMFGQEKVAMVIEGNWAIPYLQETFPQLEFATAQLPTINQKKGTMVFTVAYVMSKQSQHKAEAWELISYLTGKAGMQK
WTSTGFALPTRKSVSQKLGYEQDPLRSPLVAGVDDATPWQVGKYPAPIVNNFDNQFVSALLGQQPLKQAMLRAQNQANKQ
IQAME

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45081; Mature: 44950

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAIAIVAYHSWQIQSSPSASAPVTVKLSGWGGSPVEQKLLKQVLQDFEAQHPLIKVKY
CEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHH
EVISDQYMDVIKTRLIGEAAPDVFYLDALEAPFLMSQNVLEPLESYITPAFDLSDFETNL
HHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LDSFKYQNHIYGFPKDYSTLALFYNKKAFAAAGLSSPPATWQELRTYSRKLTGKLNKYGF
HHHHHHCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHCCCC
GEAPELARQVYKIKAFGGEVINQNGHATFASEAGLRGLQLVIDQYQKDKSSAQKSDVGTN
CCCHHHHHHHHHHHHHCCHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SGSEMFGQEKVAMVIEGNWAIPYLQETFPQLEFATAQLPTINQKKGTMVFTVAYVMSKQS
CCHHHHCCCEEEEEEECCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCEEEEHHHHHCCCH
QHKAEAWELISYLTGKAGMQKWTSTGFALPTRKSVSQKLGYEQDPLRSPLVAGVDDATPW
HHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
QVGKYPAPIVNNFDNQFVSALLGQQPLKQAMLRAQNQANKQIQAME
CCCCCCCHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure 
AIAIAIVAYHSWQIQSSPSASAPVTVKLSGWGGSPVEQKLLKQVLQDFEAQHPLIKVKY
EEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHH
EVISDQYMDVIKTRLIGEAAPDVFYLDALEAPFLMSQNVLEPLESYITPAFDLSDFETNL
HHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LDSFKYQNHIYGFPKDYSTLALFYNKKAFAAAGLSSPPATWQELRTYSRKLTGKLNKYGF
HHHHHHCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHCCCC
GEAPELARQVYKIKAFGGEVINQNGHATFASEAGLRGLQLVIDQYQKDKSSAQKSDVGTN
CCCHHHHHHHHHHHHHCCHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SGSEMFGQEKVAMVIEGNWAIPYLQETFPQLEFATAQLPTINQKKGTMVFTVAYVMSKQS
CCHHHHCCCEEEEEEECCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCEEEEHHHHHCCCH
QHKAEAWELISYLTGKAGMQKWTSTGFALPTRKSVSQKLGYEQDPLRSPLVAGVDDATPW
HHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
QVGKYPAPIVNNFDNQFVSALLGQQPLKQAMLRAQNQANKQIQAME
CCCCCCCHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA