| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909179
Identifier: 75909179
GI number: 75909179
Start: 3681566
End: 3682237
Strand: Direct
Name: 75909179
Synonym: Ava_2969
Alternate gene names: NA
Gene position: 3681566-3682237 (Clockwise)
Preceding gene: 75909178
Following gene: 75909183
Centisome position: 57.83
GC content: 43.9
Gene sequence:
>672_bases ATGACACCAGTAATTCATTCTCGTTTAAACCAGAACAATCTTTTGCCACAAGAACATGTTGTCGATACTGGCTATGTCAA TGCTCAAAACTTAGTCGATAGTCAATCCCATTTTCATGTTGATTTAGTAGGAAAAGTTCCCCCCGGAACTAGTTGGCAAG CAACAGCACAATCCGGCTTTGAGCAAAATTGCTTCACTATTCATTGGGATTTGATGCGTGTTGATTGCCCAATGGGTAAA CAAAGTAAGTCCTGGCGTACAACTGTCGATAGCCATGACAATCCAGTAGTCAAAATACAATTTGACAAATCCGATTGTTC GCTTTGTTCAAGTCGCTCAAAATGCACTCGCTCCAAAAAACTACCGCGTCTTCTGACCCTCAAACCACAGGAACTACATC TTGCATTACATGATGCTCGCATTCGCCAAAAAACTGAATCTTTTCAACAAATTTATCACCAACGTGCTGGCGTTGAAGGC TTGATTTCCCAAGCTACTGGTCGCTACCAATTACGCCGTTGTCGCTACATTGGTCTTGCCAAAACTCTCTTGCAGCATGT CATTACTGCTGCTGCTATCAACTTCAGTCGGATGTGGGATTGGTGGCAACATGTCCCATGCAGTCAGACTCGCGTTTCTC ACTTTGCTCGAATTGCTCCCACTGCCTCATAG
Upstream 100 bases:
>100_bases GACTGGTTATAATCTGCATCTGACAGAAATTTGTCACCCCATACTGCCAAACTTAATTATCAATGTGGAAACGTCCGTGG CCACAAGTGCGGATGTTGAG
Downstream 100 bases:
>100_bases TATTCCTGATTTTCTATTTTGTGATGATTGGTTTTGCCCTCTATCAATTCGCCAACAGTATCCTACAAGGGAAGGGGGTT AGGGGGTTAGGTTTCATTTA
Product: transposase
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTPVIHSRLNQNNLLPQEHVVDTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFEQNCFTIHWDLMRVDCPMGK QSKSWRTTVDSHDNPVVKIQFDKSDCSLCSSRSKCTRSKKLPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEG LISQATGRYQLRRCRYIGLAKTLLQHVITAAAINFSRMWDWWQHVPCSQTRVSHFARIAPTAS
Sequences:
>Translated_223_residues MTPVIHSRLNQNNLLPQEHVVDTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFEQNCFTIHWDLMRVDCPMGK QSKSWRTTVDSHDNPVVKIQFDKSDCSLCSSRSKCTRSKKLPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEG LISQATGRYQLRRCRYIGLAKTLLQHVITAAAINFSRMWDWWQHVPCSQTRVSHFARIAPTAS >Mature_222_residues TPVIHSRLNQNNLLPQEHVVDTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFEQNCFTIHWDLMRVDCPMGKQ SKSWRTTVDSHDNPVVKIQFDKSDCSLCSSRSKCTRSKKLPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGL ISQATGRYQLRRCRYIGLAKTLLQHVITAAAINFSRMWDWWQHVPCSQTRVSHFARIAPTAS
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25484; Mature: 25353
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVIHSRLNQNNLLPQEHVVDTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGF CCCHHHHHCCCCCCCCHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCC EQNCFTIHWDLMRVDCPMGKQSKSWRTTVDSHDNPVVKIQFDKSDCSLCSSRSKCTRSKK CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC LPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGLISQATGRYQLRRCRYIGLA CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHH KTLLQHVITAAAINFSRMWDWWQHVPCSQTRVSHFARIAPTAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TPVIHSRLNQNNLLPQEHVVDTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGF CCHHHHHCCCCCCCCHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCC EQNCFTIHWDLMRVDCPMGKQSKSWRTTVDSHDNPVVKIQFDKSDCSLCSSRSKCTRSKK CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC LPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGLISQATGRYQLRRCRYIGLA CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHH KTLLQHVITAAAINFSRMWDWWQHVPCSQTRVSHFARIAPTAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA