| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75909174
Identifier: 75909174
GI number: 75909174
Start: 3673294
End: 3674925
Strand: Direct
Name: 75909174
Synonym: Ava_2964
Alternate gene names: NA
Gene position: 3673294-3674925 (Clockwise)
Preceding gene: 75909167
Following gene: 75909175
Centisome position: 57.7
GC content: 41.91
Gene sequence:
>1632_bases ATGAAAAGACTGTTGAAATATCTGAGTCTAGGTTTATTGTCTATTGGTTTTGCCGCTAAACCAGGTTTAAGTGCTGAACG TATCAGTCTTTTTTACCCTCCCTTTGGTGAATTTTCTTTACCTGTTAGTTCGTTAGAAACCTTTGCTAAGCAAGGGAAGA TTGATGGTGATTTACAGTTTTATGCTCAACGTGCAACTCCCGAACAGTTGACACAACTACGGGAGTTTCTACAACAACGC TTTGATGTCACTCCTACCTTCATATCTCAAATTACTTACTCACCAATCGGTGAACAGGTTTTGCAACGCCTGGGAGACAT AGTACAGACCGATTCCCGCCGCAATGGCTTTTATGCTTTGCGTTCTGCATTGATTCTATCCGCCGCCAAACCACAGGGTT TCTCAGTTATTAATGTCTTACGTAATTTTCCCAGTGATAATTTGCGGCTGAATTTCTCAGAGGGTGTGAGAATAGTTGAT GACTTGTCACGATTGACCAAAAATAGGGATAGAGTGGTTGCGTCTCTGCAACAAGGTGCGGTAGCTCAGACTGTTGTTTC TAATGAGAATTTATCTAAACTACCAGATTTACGATCGCCTGGAAAGTTCCGTTGGCAAATAGTCAATTTCACCTTAAATG ATACTCAGCGCAATCGCCGTTTACCAGTAGATTTATATTTACCACAAGCTAATACAGATACTCAAGGAAAACCACCTTTT CCCCTAGTTGTGATTTCTCACGGCATCGCCTCAGACCGCTATAGTTTTATTTACCTGGCTGAACATCTAGCATCCTACGG TTTTGCTGTTGCTGTATTAGAGCATCCTGGTAGTAATGCTAAACGCTTCGAGCAATATTTTGCAGGCTTGGCAAGTCCGC CAGAACCTAGAGAATTTGTTGACAGACCTTTAGATATTAAGGTGCTTCTCGATGAACTCCAGCGTTTGGAACAGTCCGAT CCCAGGCTCCAGGGTAAACTCAATTTTCAACAAATTGGGGCGATCGGTCAATCCTTTGGTGGTTATACGGTTTTGTCCTT GGGAGGGGCAAAAATAAATTTTAACCAACTCAACCAGGACTGTAACCCCGAAAATTCTAGTTTGAATATATCGTTACTGT TGCAGTGTGAAGCTAATCAATTATTGCCACAAGATTATCAGTTGCAAGACAGCCGTATTAAAGCAGTCATTGCCATTAAT CCTATTAGTAGCTCTATTTTTGGTGAAAGCGGTATCAGTCAGATTAAACTTCCTGTGATGATGGTAGCAGGTAGCCAAGA TATTTTCGCCCCACCTGTACCCGAACAAATTCGCCCTTTTACTTGGCTTCCTAACCCCTATAAATATTTAGTCTTAATTG ACAATGCTACCCACTTCACTCTCATCGGCGATTCACCCCAAGGGAAGAATGTCTTACCTGTACCAAGTGGATTGCTTGGC CCTGACAGAACTGCGGCTTATTCCTATCTCAAGGCTTTAAGTGTGGCTTTTTTACAAGCCAATCTACTCAATCGTCCTGA ATATCGCTCTTATTTGCAGCCTTCTTACGCTCAATCTATTAGCCAAGCTCCTCTAAATCTGAATATTTGGCAGTCATTAA CTGCTGAACAATTGATGGAAATTAGGGAGTAG
Upstream 100 bases:
>100_bases GTTCGGAGAAAAGGCACATTAAACTAGATCAAGAACAACTAGCGACTAACAACTAACATACGTAGTTTATTTAGACGAGG TAGATAAGCGGATTATTCTC
Downstream 100 bases:
>100_bases GGAAGGGGTAATGAGGGGAAAGAGTTGATGTCCAGATGTTGGATACAACTTTTTTTCTAATGACAACTAACAACTGACCA ATAACAATTTCAGTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MKRLLKYLSLGLLSIGFAAKPGLSAERISLFYPPFGEFSLPVSSLETFAKQGKIDGDLQFYAQRATPEQLTQLREFLQQR FDVTPTFISQITYSPIGEQVLQRLGDIVQTDSRRNGFYALRSALILSAAKPQGFSVINVLRNFPSDNLRLNFSEGVRIVD DLSRLTKNRDRVVASLQQGAVAQTVVSNENLSKLPDLRSPGKFRWQIVNFTLNDTQRNRRLPVDLYLPQANTDTQGKPPF PLVVISHGIASDRYSFIYLAEHLASYGFAVAVLEHPGSNAKRFEQYFAGLASPPEPREFVDRPLDIKVLLDELQRLEQSD PRLQGKLNFQQIGAIGQSFGGYTVLSLGGAKINFNQLNQDCNPENSSLNISLLLQCEANQLLPQDYQLQDSRIKAVIAIN PISSSIFGESGISQIKLPVMMVAGSQDIFAPPVPEQIRPFTWLPNPYKYLVLIDNATHFTLIGDSPQGKNVLPVPSGLLG PDRTAAYSYLKALSVAFLQANLLNRPEYRSYLQPSYAQSISQAPLNLNIWQSLTAEQLMEIRE
Sequences:
>Translated_543_residues MKRLLKYLSLGLLSIGFAAKPGLSAERISLFYPPFGEFSLPVSSLETFAKQGKIDGDLQFYAQRATPEQLTQLREFLQQR FDVTPTFISQITYSPIGEQVLQRLGDIVQTDSRRNGFYALRSALILSAAKPQGFSVINVLRNFPSDNLRLNFSEGVRIVD DLSRLTKNRDRVVASLQQGAVAQTVVSNENLSKLPDLRSPGKFRWQIVNFTLNDTQRNRRLPVDLYLPQANTDTQGKPPF PLVVISHGIASDRYSFIYLAEHLASYGFAVAVLEHPGSNAKRFEQYFAGLASPPEPREFVDRPLDIKVLLDELQRLEQSD PRLQGKLNFQQIGAIGQSFGGYTVLSLGGAKINFNQLNQDCNPENSSLNISLLLQCEANQLLPQDYQLQDSRIKAVIAIN PISSSIFGESGISQIKLPVMMVAGSQDIFAPPVPEQIRPFTWLPNPYKYLVLIDNATHFTLIGDSPQGKNVLPVPSGLLG PDRTAAYSYLKALSVAFLQANLLNRPEYRSYLQPSYAQSISQAPLNLNIWQSLTAEQLMEIRE >Mature_543_residues MKRLLKYLSLGLLSIGFAAKPGLSAERISLFYPPFGEFSLPVSSLETFAKQGKIDGDLQFYAQRATPEQLTQLREFLQQR FDVTPTFISQITYSPIGEQVLQRLGDIVQTDSRRNGFYALRSALILSAAKPQGFSVINVLRNFPSDNLRLNFSEGVRIVD DLSRLTKNRDRVVASLQQGAVAQTVVSNENLSKLPDLRSPGKFRWQIVNFTLNDTQRNRRLPVDLYLPQANTDTQGKPPF PLVVISHGIASDRYSFIYLAEHLASYGFAVAVLEHPGSNAKRFEQYFAGLASPPEPREFVDRPLDIKVLLDELQRLEQSD PRLQGKLNFQQIGAIGQSFGGYTVLSLGGAKINFNQLNQDCNPENSSLNISLLLQCEANQLLPQDYQLQDSRIKAVIAIN PISSSIFGESGISQIKLPVMMVAGSQDIFAPPVPEQIRPFTWLPNPYKYLVLIDNATHFTLIGDSPQGKNVLPVPSGLLG PDRTAAYSYLKALSVAFLQANLLNRPEYRSYLQPSYAQSISQAPLNLNIWQSLTAEQLMEIRE
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60595; Mature: 60595
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLKYLSLGLLSIGFAAKPGLSAERISLFYPPFGEFSLPVSSLETFAKQGKIDGDLQF CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHE YAQRATPEQLTQLREFLQQRFDVTPTFISQITYSPIGEQVLQRLGDIVQTDSRRNGFYAL EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH RSALILSAAKPQGFSVINVLRNFPSDNLRLNFSEGVRIVDDLSRLTKNRDRVVASLQQGA HHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHHCCHHHHHHHHHHCC VAQTVVSNENLSKLPDLRSPGKFRWQIVNFTLNDTQRNRRLPVDLYLPQANTDTQGKPPF HHHHHHCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCC PLVVISHGIASDRYSFIYLAEHLASYGFAVAVLEHPGSNAKRFEQYFAGLASPPEPREFV CEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHH DRPLDIKVLLDELQRLEQSDPRLQGKLNFQQIGAIGQSFGGYTVLSLGGAKINFNQLNQD CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEHHHCCCC CNPENSSLNISLLLQCEANQLLPQDYQLQDSRIKAVIAINPISSSIFGESGISQIKLPVM CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEE MVAGSQDIFAPPVPEQIRPFTWLPNPYKYLVLIDNATHFTLIGDSPQGKNVLPVPSGLLG EEECCCCCCCCCCCHHCCCCEECCCCEEEEEEEECCEEEEEECCCCCCCEECCCCCCCCC PDRTAAYSYLKALSVAFLQANLLNRPEYRSYLQPSYAQSISQAPLNLNIWQSLTAEQLME CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH IRE HCC >Mature Secondary Structure MKRLLKYLSLGLLSIGFAAKPGLSAERISLFYPPFGEFSLPVSSLETFAKQGKIDGDLQF CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHE YAQRATPEQLTQLREFLQQRFDVTPTFISQITYSPIGEQVLQRLGDIVQTDSRRNGFYAL EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH RSALILSAAKPQGFSVINVLRNFPSDNLRLNFSEGVRIVDDLSRLTKNRDRVVASLQQGA HHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHHCCHHHHHHHHHHCC VAQTVVSNENLSKLPDLRSPGKFRWQIVNFTLNDTQRNRRLPVDLYLPQANTDTQGKPPF HHHHHHCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCC PLVVISHGIASDRYSFIYLAEHLASYGFAVAVLEHPGSNAKRFEQYFAGLASPPEPREFV CEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHH DRPLDIKVLLDELQRLEQSDPRLQGKLNFQQIGAIGQSFGGYTVLSLGGAKINFNQLNQD CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEHHHCCCC CNPENSSLNISLLLQCEANQLLPQDYQLQDSRIKAVIAINPISSSIFGESGISQIKLPVM CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEE MVAGSQDIFAPPVPEQIRPFTWLPNPYKYLVLIDNATHFTLIGDSPQGKNVLPVPSGLLG EEECCCCCCCCCCCHHCCCCEECCCCEEEEEEEECCEEEEEECCCCCCCEECCCCCCCCC PDRTAAYSYLKALSVAFLQANLLNRPEYRSYLQPSYAQSISQAPLNLNIWQSLTAEQLME CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH IRE HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA