Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75909155

Identifier: 75909155

GI number: 75909155

Start: 3651234

End: 3652160

Strand: Direct

Name: 75909155

Synonym: Ava_2945

Alternate gene names: NA

Gene position: 3651234-3652160 (Clockwise)

Preceding gene: 75909153

Following gene: 75909160

Centisome position: 57.36

GC content: 41.1

Gene sequence:

>927_bases
ATGGAAAATAGTAGTGTGAGAATTGTATCTCTGATTCCTAGTGCAACAGAGATTTTAGCAAACTTGGGTTTGAGTGATGC
TATTGTTGGGCGATCGCATGAATGTGATTATCCCCCAGAAATCCAAAATCGTCCAACTTGTACGCAAGCACGGTTGAATA
GTGATGCTTCCAGCAGCGAGATTCATCATGAAGTGAATAATGTACTGCAATCTGCGCTGAGTATTTATCAGGTAAAATTA
GACGTTTTGGAGCAATTAAAGCCTACCCATATTTTGACCCAAGACCAGTGTGATGTCTGTGCAGTCAGCCTCAAAGATGT
AGAAGAAGCGGTTAAAGAACTTACCCAAAGTTCTCCCCAAATCATTTCCTTGCAACCTAATCTGCTTGAGGATGTATGGC
AGGATATTGAGCGCGTAGCTCATATCTTTGGTGTAGACTCAGTAAAAATACTAGATAATTTAGAAGCCCGTGTCAAAATT
TGCCAACAAAAAATTCAAGGGCTTTCTCTAGAAGAAGTACCGACTGTGGCTTGTATTGAGTGGACAGACCCACTGATGGC
CGCAGCAAATTGGATTCCTGAATTAGTCAACTTAGCTGGGGGACAAACACTATTTTCCCTTATAGGTCAGCCGTCCCCAC
ATTTGGAATGGGAAAATCTTTTAATTAGTAATCCAGATATTATAATTTTCATGCCTTGTGGCTTTAACTTACAACGAACT
CGTCAAGAAGCCCAACTATTCACTCAAAACCCAGAATGGACAAAACTGCACGCCAGCCAAACTGGTAGAGTTTACATCAC
TGATGGTAATTCCTATTTCAACCGTCCAGGCCCCCGACTGGTAGATTCTCTAGAGATATTGTCAGAGATTTTACACCCAG
AAATTTTTGATTATGGTTACAAGGGTACTGCTTGGGAACCTTTATAA

Upstream 100 bases:

>100_bases
TTGGTTTTCGCCAAATAATCTCCCCTGAAGAAAGATACCCCAGAAGTAGAAGTCTGTAACAATTGAATTAAGAACACAGA
TGCTGTTGTAGAGGTGTCTA

Downstream 100 bases:

>100_bases
AGAAGCTGCTTGATTTAGCCATTCAATCAGCATTTTTAAGCTATGAGGTAATACTGCTTCATTAACAATTATTGTATGGG
TTTTACCATTATCTTCTAAA

Product: putative iron transport system substrate-binding protein

Products: NA

Alternate protein names: ABC Fe3+-Hydroxamate Transporter Periplasmic Component; ABC Transporter; MoxR-Like ATPases-Like; Fe3+ ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPTCTQARLNSDASSSEIHHEVNNVLQSALSIYQVKL
DVLEQLKPTHILTQDQCDVCAVSLKDVEEAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI
CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWENLLISNPDIIIFMPCGFNLQRT
RQEAQLFTQNPEWTKLHASQTGRVYITDGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL

Sequences:

>Translated_308_residues
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPTCTQARLNSDASSSEIHHEVNNVLQSALSIYQVKL
DVLEQLKPTHILTQDQCDVCAVSLKDVEEAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI
CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWENLLISNPDIIIFMPCGFNLQRT
RQEAQLFTQNPEWTKLHASQTGRVYITDGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL
>Mature_308_residues
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPTCTQARLNSDASSSEIHHEVNNVLQSALSIYQVKL
DVLEQLKPTHILTQDQCDVCAVSLKDVEEAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI
CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWENLLISNPDIIIFMPCGFNLQRT
RQEAQLFTQNPEWTKLHASQTGRVYITDGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34472; Mature: 34472

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPTCTQARLNSDASSSE
CCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHH
IHHEVNNVLQSALSIYQVKLDVLEQLKPTHILTQDQCDVCAVSLKDVEEAVKELTQSSPQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
IISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKICQQKIQGLSLEEVPTVACIE
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE
WTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWENLLISNPDIIIFMPCGFNLQRT
CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHEEECCCCEEEEECCCCCHHHH
RQEAQLFTQNPEWTKLHASQTGRVYITDGNSYFNRPGPRLVDSLEILSEILHPEIFDYGY
HHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCC
KGTAWEPL
CCCCCCCC
>Mature Secondary Structure
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPTCTQARLNSDASSSE
CCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHH
IHHEVNNVLQSALSIYQVKLDVLEQLKPTHILTQDQCDVCAVSLKDVEEAVKELTQSSPQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
IISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKICQQKIQGLSLEEVPTVACIE
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE
WTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWENLLISNPDIIIFMPCGFNLQRT
CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHEEECCCCEEEEECCCCCHHHH
RQEAQLFTQNPEWTKLHASQTGRVYITDGNSYFNRPGPRLVDSLEILSEILHPEIFDYGY
HHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCC
KGTAWEPL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA