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The map label for this gene is sepF

Identifier: 75909110

GI number: 75909110

Start: 3604015

End: 3604611

Strand: Direct

Name: sepF

Synonym: Ava_2900

Alternate gene names: 75909110

Gene position: 3604015-3604611 (Clockwise)

Preceding gene: 75909109

Following gene: 75909111

Centisome position: 56.62

GC content: 46.57

Gene sequence:

>597_bases
ATGAACAATATATTTTCTAAACTGCGAGACTTTGTTGGTCTCAATGAGCAGGTAGAATACGAGTACTACGAAGAAGAAGC
AGATACAGATAACTACCAAAACCTGTATCAACAAGAAAATCCCCAACCAGCACCAGCAGAGGCTGCCCCAAACAATCGAC
GTTGGCGCGAACCCATGACTACAATGGGTGATGACGTAGCAACAGGAACAAAATCTGCGATGGGGAATGTGATTGGTATG
CCAGGAGCAATTAACGGGATTTCTGAAGTATTAGTGCTTGAACCTCGTACATTTGAAGAAATGCCCCAGGCGATTCAAGC
ATTGCGCGAACGTAAATCAGTAGTGCTGAACTTGACCATCATGGACCCAGATCAAGCACAAAGAGCTGTTGATTTTGTTG
CAGGTGGAACCTACGCGCTAGATGGACATCAAGAACGTATTGGCGAAAGTATCTTTTTGTTTACCCCCAGCTGTGTGCAA
GTTAGCACCCAAGGTGGAGTTATTCATGAAGTACCCCAACCCCCAGCACGTCCAGCACGTCCGGCTTCAACTAATCCACC
AGCTTGGGGCAACGAAACCAACCGGATGGCACAATAA

Upstream 100 bases:

>100_bases
ATAAAATTAATAGGCTATTTGCCCTTTGTAGCTAGTTAAACAGCTACATCAACGATTAACCGGATAGTTAGAGGCAATTT
GCAGAAGGAGTGCAACTAAT

Downstream 100 bases:

>100_bases
AGTTAAATTAGTCATTAGTCCATAGTCAAGAGTCCAAATTAGAAAATTTTTGACTATTGACTATTGACTATTGATTAACG
AATAACGACTAACGACTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMTTMGDDVATGTKSAMGNVIGM
PGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTIMDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQ
VSTQGGVIHEVPQPPARPARPASTNPPAWGNETNRMAQ

Sequences:

>Translated_198_residues
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMTTMGDDVATGTKSAMGNVIGM
PGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTIMDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQ
VSTQGGVIHEVPQPPARPARPASTNPPAWGNETNRMAQ
>Mature_198_residues
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMTTMGDDVATGTKSAMGNVIGM
PGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTIMDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQ
VSTQGGVIHEVPQPPARPARPASTNPPAWGNETNRMAQ

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_ANAVT (Q3M925)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_323406.1
- STRING:   Q3M925
- GeneID:   3681405
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_2900
- NMPDR:   fig|240292.3.peg.1568
- eggNOG:   COG1799
- HOGENOM:   HBG732469
- OMA:   NEQVEYE
- ProtClustDB:   CLSK892820
- BioCyc:   AVAR240292:AVA_2900-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 21938; Mature: 21938

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMT
CCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCHH
TMGDDVATGTKSAMGNVIGMPGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTI
HCCCHHHCCCHHHHCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEEEEE
MDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQVSTQGGVIHEVPQPPARPAR
ECCHHHHHHHHHHCCCEEEECCHHHHHCCEEEEECCCCEEEECCCCEEECCCCCCCCCCC
PASTNPPAWGNETNRMAQ
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMT
CCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCHH
TMGDDVATGTKSAMGNVIGMPGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTI
HCCCHHHCCCHHHHCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEEEEE
MDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQVSTQGGVIHEVPQPPARPAR
ECCHHHHHHHHHHCCCEEEECCHHHHHCCEEEEECCCCEEEECCCCEEECCCCCCCCCCC
PASTNPPAWGNETNRMAQ
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA