| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is engA
Identifier: 75909106
GI number: 75909106
Start: 3599776
End: 3601137
Strand: Direct
Name: engA
Synonym: Ava_2896
Alternate gene names: 75909106
Gene position: 3599776-3601137 (Clockwise)
Preceding gene: 75909105
Following gene: 75909107
Centisome position: 56.55
GC content: 47.21
Gene sequence:
>1362_bases ATGGGACTGCCAATTGTTGCAATTATCGGTCGCCCAAATGTGGGCAAATCAACCCTGGTTAATCGTCTCGCCGGGGAACA AACGGCGATTGTCCACGATGAACCGGGTGTGACACGCGATCGCACTTACTTACCAGCCTACTGGAGCGATCGGGAATTTC AAGTAGTAGATACAGGCGGCTTAGTCTTTAACGATGACACAGAATTCTTGCCCCTGATCCGCCAACAAGCATTAGCTGCC CTCCACGAAGCCAGCGCGGCTATTTTCGTTGTTAATGGTCAAACAGGCCCCAATTCGGCAGATGAAGAAATTGCCGAGTG GTTACGCCAACAACCAGTACCAGTCTTCTTGGCAGTTAACAAATGCGAATCCCCAGACCAGGGATCGATTCAAGCCTCCG AATTTTGGGAACTGGGACTAGGAGAACCTTACCCAATCTCTGCGATTCATGGCAACGGTACAGGCGAATTACTCGACGAA CTCATTAAACACCTTCCTCCGACTACAGAATTAGAAGAAAATAACGAAATCAAAATTGCCATTATTGGCAGACCAAATGT TGGCAAATCAAGTTTATTAAACGCTTTTGCTGGGGAGGAACGGGTAATAGTCAGCCCCATTTCTGGGACAACCCGTGATG CGATCGATACTTTTATCGAACGAAATGGGCAGAACTACCGTCTCATCGATACAGCCGGGATTCGCAAAAAGAAAAGCATT GACTATGGTACGGAATTCTTTAGTATTAACCGTGCTTTTAAAGCCATTCGCCGCGCCGATGTAGTTTTGTTGGTCATAGA TGCCTTGGATGGTGTCACCGAACAAGACCAAAAGCTAGCAGGCAGAATTCTCGATGAAGGTAAGGCTTGTGTCGTCGTCG TCAATAAATGGGATGCCGTTGAAAAAGACTCCTATACTATCTACGACTATGAGAAAAATCTGGAAGCACGGCTACATTTT ACAGAATGGGCTGACACTATCTACGTCAGTGCGGTCACAGGACAACGGGTAGAAAAGATTTTAGAGTTGGTGACTAAAGC CAATGAAGAACACAAACGCCGCGTTAGCACATCAGTGATTAACGAAGTTCTGGAAGACGCAGTTAGTTGGCACTCTCCCC CAACCTCTCGCGGCGGTCGCCAAGGGAGAATTTACTACGGTACACAAGTCAGCACTCAACCACCCACCATTGCCTTATTT GTCAACGAGGCTAAACGCTTTAACGACAACTACCGTCGTTACATTGAAAGGCAATTCCGCCAACAATTAGGCTTTAAAGG GACTCCCATTCGCTTACTGTGGCGCAGTAAAAAAGTTAGAGATGTGGAAAGCGGTAGCGCCAATCGGGCAACTCGCGTTT AA
Upstream 100 bases:
>100_bases CAACAAAAAATCTAGGTGCGTAATTCCTAGCTAAATCAAAACTTAAAGTAGCTAAAATGTAGAGATGTGATATAGTATCT CTCTTACTTACCCTTGGTTT
Downstream 100 bases:
>100_bases GATTTGTCAATGGTCATTAGTCATAAGTCATTGGTCATTAGTCCTTAGTGTTTAGCTATGAACTGTTGACTATTGACTAT GAACTATTGATTATGAACTA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MGLPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGLVFNDDTEFLPLIRQQALAA LHEASAAIFVVNGQTGPNSADEEIAEWLRQQPVPVFLAVNKCESPDQGSIQASEFWELGLGEPYPISAIHGNGTGELLDE LIKHLPPTTELEENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERNGQNYRLIDTAGIRKKKSI DYGTEFFSINRAFKAIRRADVVLLVIDALDGVTEQDQKLAGRILDEGKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHF TEWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVINEVLEDAVSWHSPPTSRGGRQGRIYYGTQVSTQPPTIALF VNEAKRFNDNYRRYIERQFRQQLGFKGTPIRLLWRSKKVRDVESGSANRATRV
Sequences:
>Translated_453_residues MGLPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGLVFNDDTEFLPLIRQQALAA LHEASAAIFVVNGQTGPNSADEEIAEWLRQQPVPVFLAVNKCESPDQGSIQASEFWELGLGEPYPISAIHGNGTGELLDE LIKHLPPTTELEENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERNGQNYRLIDTAGIRKKKSI DYGTEFFSINRAFKAIRRADVVLLVIDALDGVTEQDQKLAGRILDEGKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHF TEWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVINEVLEDAVSWHSPPTSRGGRQGRIYYGTQVSTQPPTIALF VNEAKRFNDNYRRYIERQFRQQLGFKGTPIRLLWRSKKVRDVESGSANRATRV >Mature_452_residues GLPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGLVFNDDTEFLPLIRQQALAAL HEASAAIFVVNGQTGPNSADEEIAEWLRQQPVPVFLAVNKCESPDQGSIQASEFWELGLGEPYPISAIHGNGTGELLDEL IKHLPPTTELEENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERNGQNYRLIDTAGIRKKKSID YGTEFFSINRAFKAIRRADVVLLVIDALDGVTEQDQKLAGRILDEGKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHFT EWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVINEVLEDAVSWHSPPTSRGGRQGRIYYGTQVSTQPPTIALFV NEAKRFNDNYRRYIERQFRQQLGFKGTPIRLLWRSKKVRDVESGSANRATRV
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=466, Percent_Identity=40.343347639485, Blast_Score=325, Evalue=3e-90, Organism=Escherichia coli, GI2367268, Length=91, Percent_Identity=47.2527472527472, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788919, Length=171, Percent_Identity=32.1637426900585, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17507259, Length=91, Percent_Identity=47.2527472527472, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323665, Length=135, Percent_Identity=39.2592592592593, Blast_Score=87, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_ANAVT (Q3M929)
Other databases:
- EMBL: CP000117 - RefSeq: YP_323402.1 - ProteinModelPortal: Q3M929 - SMR: Q3M929 - STRING: Q3M929 - GeneID: 3681401 - GenomeReviews: CP000117_GR - KEGG: ava:Ava_2896 - NMPDR: fig|240292.3.peg.1564 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q3M929 - ProtClustDB: PRK00093 - BioCyc: AVAR240292:AVA_2896-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 50664; Mature: 50533
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGG CCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEECCCEECCCEEEEEECCC LVFNDDTEFLPLIRQQALAALHEASAAIFVVNGQTGPNSADEEIAEWLRQQPVPVFLAVN EEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEE KCESPDQGSIQASEFWELGLGEPYPISAIHGNGTGELLDELIKHLPPTTELEENNEIKIA CCCCCCCCCEEHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEE IIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERNGQNYRLIDTAGIRKKKSI EEECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCC DYGTEFFSINRAFKAIRRADVVLLVIDALDGVTEQDQKLAGRILDEGKACVVVVNKWDAV CCCHHHHHHHHHHHHHHHCCEEEEEEEHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC EKDSYTIYDYEKNLEARLHFTEWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVI CCCCEEEEEECCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH NEVLEDAVSWHSPPTSRGGRQGRIYYGTQVSTQPPTIALFVNEAKRFNDNYRRYIERQFR HHHHHHHHHCCCCCCCCCCCCCEEEECCEECCCCCEEEEEECCHHHCCHHHHHHHHHHHH QQLGFKGTPIRLLWRSKKVRDVESGSANRATRV HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGG CCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEECCCEECCCEEEEEECCC LVFNDDTEFLPLIRQQALAALHEASAAIFVVNGQTGPNSADEEIAEWLRQQPVPVFLAVN EEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEE KCESPDQGSIQASEFWELGLGEPYPISAIHGNGTGELLDELIKHLPPTTELEENNEIKIA CCCCCCCCCEEHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEE IIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERNGQNYRLIDTAGIRKKKSI EEECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCC DYGTEFFSINRAFKAIRRADVVLLVIDALDGVTEQDQKLAGRILDEGKACVVVVNKWDAV CCCHHHHHHHHHHHHHHHCCEEEEEEEHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC EKDSYTIYDYEKNLEARLHFTEWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVI CCCCEEEEEECCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH NEVLEDAVSWHSPPTSRGGRQGRIYYGTQVSTQPPTIALFVNEAKRFNDNYRRYIERQFR HHHHHHHHHCCCCCCCCCCCCCEEEECCEECCCCCEEEEEECCHHHCCHHHHHHHHHHHH QQLGFKGTPIRLLWRSKKVRDVESGSANRATRV HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA