Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75909034

Identifier: 75909034

GI number: 75909034

Start: 3493737

End: 3494144

Strand: Direct

Name: 75909034

Synonym: Ava_2822

Alternate gene names: NA

Gene position: 3493737-3494144 (Clockwise)

Preceding gene: 75909028

Following gene: 75909036

Centisome position: 54.88

GC content: 38.97

Gene sequence:

>408_bases
ATGGGCATATATTATATCTGGAATCTTGTCGAGCGATCGCCTGTGGCGAGTTGTAATACCCCCTATGGTTTCATTCAGAC
AAAAGAGGCTAAATACTATACATTTGCTGAAGAGATATTAGTTCAACCTTGGCGCGGTCAGCATCATGTATATGCTTTAT
TTCAGATTCCTGACGGCTACCAATATGAGTATTTATTTCGGCTAAAAATCCCAGGAGAATCTACTCAATGTGGGGGATTA
ATGCCTCTTGATAAAAATATTCTTGCTAGCATTCCCCGTAAGCAAGGTTACTATCCGGTTCGAGGATATTTAAATACACG
CATTGCTCTAAATCTGATTATCCAAGGTAAGCTCAATCAGTTAAAGCAACCACAAAACTGGCAGCTTGGTTATGTTAAAA
ATAACTAG

Upstream 100 bases:

>100_bases
TTTCCTCGCTAAAATAACACAGAAAAATGCTTTAGGGTCTATATAAGTGCTGAGAAAATCTCGATTTTTTATATTATTTG
CACTTACTTTAGTTTGTGTG

Downstream 100 bases:

>100_bases
TACCGCAAGGCGGAATTCAAAATTCAAAATTCGTCTTGGAAAGTTTGCTCAACGGGGGGAACCCCCGCACCGCAACTTTC
CGCAAAATTCAAAATGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MGIYYIWNLVERSPVASCNTPYGFIQTKEAKYYTFAEEILVQPWRGQHHVYALFQIPDGYQYEYLFRLKIPGESTQCGGL
MPLDKNILASIPRKQGYYPVRGYLNTRIALNLIIQGKLNQLKQPQNWQLGYVKNN

Sequences:

>Translated_135_residues
MGIYYIWNLVERSPVASCNTPYGFIQTKEAKYYTFAEEILVQPWRGQHHVYALFQIPDGYQYEYLFRLKIPGESTQCGGL
MPLDKNILASIPRKQGYYPVRGYLNTRIALNLIIQGKLNQLKQPQNWQLGYVKNN
>Mature_134_residues
GIYYIWNLVERSPVASCNTPYGFIQTKEAKYYTFAEEILVQPWRGQHHVYALFQIPDGYQYEYLFRLKIPGESTQCGGLM
PLDKNILASIPRKQGYYPVRGYLNTRIALNLIIQGKLNQLKQPQNWQLGYVKNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15767; Mature: 15636

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYYIWNLVERSPVASCNTPYGFIQTKEAKYYTFAEEILVQPWRGQHHVYALFQIPDGY
CCEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEHHHHHCCCCCCCEEEEEEEECCCCC
QYEYLFRLKIPGESTQCGGLMPLDKNILASIPRKQGYYPVRGYLNTRIALNLIIQGKLNQ
CEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCEEEEEEEEEEEEECCHHH
LKQPQNWQLGYVKNN
CCCCCCCEEEEEECC
>Mature Secondary Structure 
GIYYIWNLVERSPVASCNTPYGFIQTKEAKYYTFAEEILVQPWRGQHHVYALFQIPDGY
CEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEHHHHHCCCCCCCEEEEEEEECCCCC
QYEYLFRLKIPGESTQCGGLMPLDKNILASIPRKQGYYPVRGYLNTRIALNLIIQGKLNQ
CEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCEEEEEEEEEEEEECCHHH
LKQPQNWQLGYVKNN
CCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA