Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908980

Identifier: 75908980

GI number: 75908980

Start: 3416647

End: 3419307

Strand: Direct

Name: 75908980

Synonym: Ava_2768

Alternate gene names: NA

Gene position: 3416647-3419307 (Clockwise)

Preceding gene: 75908979

Following gene: 75908983

Centisome position: 53.67

GC content: 38.59

Gene sequence:

>2661_bases
ATGACAGCAAATCTCACCCAAGAAGAACTTAGATTACAAGCAGCCAGGGATCACATAGCTCATTGGCGTAGATGGGGACC
ATATTTGAGCGATCGCCAGTGGGGAACAGTGCGCGAAGATTATAGTTCTCATGGGAATGCGTGGGACTATTTCACCCATG
ATCAAGCTCGTTCTCGCGCTTACCGTTGGGGTGAAGACGGGTTATTGGGGATTTGTGATAATCATCAACGGCTTTGTTTT
GCGATCGCTCTTTGGAATGGTGAAGATTCTATTCTCAAAGAAAGAATTTTTGGTTTAACGGGAAATGAAGGTAATCATGG
GGAAGATGTTAAAGAATATTACTTTTATTTAGATAACACCCCCACCCATGCTTACATGAAGGCTTTGTATAAATATCCCC
AAACAGCCTTCCCCTACTCCCAGTTAGTAACAGAAAATCAGCGCCGCAATCGTCGGGATGCAGAATTTGAACTGATAGAT
ACGGGTGTATTTGATTATGATAAATACTTTGATGTATTTGTTGAATATGCCAAGAATACTGCCGAGGATATTCTCATTCA
AATTACGGTAATTAATCGAGGAACAGAAGCCAAGACACTGCACTTATTACCTACGATTTGGTTTCATAATACTTGGTCTT
GGAATGGAGATACAAATAAACCTATTTTGCAATTAGTAAAATTAAGTGATGATTTTCAGACCATAGCAGCCCACCATCAA
ACTTTAGGTGAAAGATGGCTATACTGTCAACAACCAAATGAGATTCTTTTTACAGAAAACGAAACAAATATACAGAAATT
ATTTGGTTATCCTAATACATCTGCTTATGTTAAAGATGGAATTAATGACTATATTGTTAACGGCAAAAAATCAGCAGTAA
ATCCTGAACAGGTGGGAACAAAAGCCTCTGCCATCTATGTGTTAACAGTTGGTGCAGGTGAAACGCAGATTATCAAATTA
AGACTATCTGATACACCTGATTTGATTGAACCATTTGGACAGGAATTTAGTATAATTTTCAGTCAACGCCAAAGGGAAGC
AGATGAATTTTATCAGCGCGTTACGCCATTTCAATTAAGTGAAGATATGCGAAATGTGCAGCGACAAGCATTTGCAGGAA
TGCTGTGGAGTAAGCAATTTTATCATTACATCGTCGAAGATTGGCTAAAAGGAGACACCCACACACCAAAGCCACCACCA
GAACGCCGCAATGGTAGAAATAAAGAATGGTTTCATCTCTACAATGAAGATATTCTCTCCATGCCAGATAAGTGGGAATA
TCCTTGGTTTGCTGCTTGGGATTTAGCATTTCATACCATCCCTTTGGCAATGATTGATCCGGATTTTGCTAAGTACCAAT
TAGATGTTTTAACACGGGAATGGTATATGCACCCCAACGGGCAAATTCCGGCTTATGAATGGGCTTTTGGTGATGTTAAT
CCTCCTGTTCATGCTTGGGCAACTTGGCGCATATATAAAATTGAACAGAAAATTTATGGACGAGCAGATAGACAGTTTTT
AGAAAGAGTATTTCAAAAGCTGATGCTCAATTTTACCTGGTGGGTAAATCGTAAGGATGCTGAAGGTAATAATGTCTTCC
AAGGAGGGTTTTTAGGATTAGATAACATTGGTGTATTTGACCGCAGTGCAACTTTACCTACGGGCGGACATATTGATCAA
TCTGATGGTACAAGTTGGATGGGAATGTATTGTTTAAATATGTTAGCCATTGCTTTAGAATTAGCCAAGACTAATCCTGT
TTATGAAGACATTGCCACTAAATTTTTTGAACATTTCCTTTACATAGCTGATGCTATGAATAAAATTGGTGAAATGGAAG
CTAGTTTATGGAATGAAGTAGATGGTTTTTACTACGATGTGCTGCATCTACCTGAACGACAGATTACCTTAAAAGTGCGC
TCAATGGTGGGACTAATTCCCCTATTTGCTATTGAAACTATTGAACCAGACACATTAAAAATGCTTCCTGGCTTTAAAAA
GCGGCTGGAGTGGTTTATCAAAAACCGTCCAGATTTGCGACAAAATGTCGCTTGTATGGAAACAATAGGCATAGGCGCTA
GAAGATTATTGGCAATAGTTTCACGGGATAAACTAAGACATATCCTCCAAAAAATGCTCGATGAAAGTGAATTTCTTAGC
CTATATGGTATTCGCGCTCTTTCGAGATTTCATGCAGAACATCCCTATAAATTTGATGTCAACGGTTCTCAATTTCGTGT
AGATTATGAACCGGCTGAATCTAGTAGTGGTTTATTTGGCGGTAATTCTAACTGGCGGGGGCCTATTTGGTTTCCGGTGA
ATTTTCTCTTAATTGAATCTCTGCAAAAGTTATATTATTATCTAGGAGATGATTTTCAGGTGGAATGTCCTACAGGTTCT
GGTAAGATGATGAATCTTTGGGAAGTAGCATCAGAATTATCCCAAAGATTAACTAGAATTTTCTTAAAGGATACTTCTGG
TAAACGTCCTGTTTACGGTGCGACAGAGAAGTTTCAAAATGACACACATTGGCGTGATTTGATTTTATTTTATGAATATT
TTCATGGTGATAATGGAGCAGGAATTGGTGCGAGTCATCAAACAGGATGGACAGGTTTAGTCGCTAAATTAATTCAGCAT
CTGGGTGAAAAATCTTTGTAG

Upstream 100 bases:

>100_bases
TTCTCTCCGCACCTCTGCGCCTCTGCGTGAAATAAATTCATCTTCTCACTCAGCAACGCCAGATTTTCCTATTTTCGACT
CGATCAATGTGCATAACCCG

Downstream 100 bases:

>100_bases
AGACGCGATAAATCGCGTCTCTACAAACATGAATCGTGTCTGTACTAGAATCCCCACAAACATGAATCGCGTCTGTAATA
CAATCCCCACGTCTTCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 886; Mature: 885

Protein sequence:

>886_residues
MTANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRAYRWGEDGLLGICDNHQRLCF
AIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNTPTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELID
TGVFDYDKYFDVFVEYAKNTAEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ
TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGTKASAIYVLTVGAGETQIIKL
RLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLSEDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPP
ERRNGRNKEWFHLYNEDILSMPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN
PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGLDNIGVFDRSATLPTGGHIDQ
SDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFLYIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVR
SMVGLIPLFAIETIEPDTLKMLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS
LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIESLQKLYYYLGDDFQVECPTGS
GKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQNDTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQH
LGEKSL

Sequences:

>Translated_886_residues
MTANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRAYRWGEDGLLGICDNHQRLCF
AIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNTPTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELID
TGVFDYDKYFDVFVEYAKNTAEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ
TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGTKASAIYVLTVGAGETQIIKL
RLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLSEDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPP
ERRNGRNKEWFHLYNEDILSMPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN
PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGLDNIGVFDRSATLPTGGHIDQ
SDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFLYIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVR
SMVGLIPLFAIETIEPDTLKMLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS
LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIESLQKLYYYLGDDFQVECPTGS
GKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQNDTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQH
LGEKSL
>Mature_885_residues
TANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRAYRWGEDGLLGICDNHQRLCFA
IALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNTPTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELIDT
GVFDYDKYFDVFVEYAKNTAEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQT
LGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGTKASAIYVLTVGAGETQIIKLR
LSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLSEDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPPE
RRNGRNKEWFHLYNEDILSMPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVNP
PVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGLDNIGVFDRSATLPTGGHIDQS
DGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFLYIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVRS
MVGLIPLFAIETIEPDTLKMLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLSL
YGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIESLQKLYYYLGDDFQVECPTGSG
KMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQNDTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQHL
GEKSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323852, Length=937, Percent_Identity=52.9348986125934, Blast_Score=1002, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103240; Mature: 103109

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
YRWGEDGLLGICDNHQRLCFAIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNT
HCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCC
PTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELIDTGVFDYDKYFDVFVEYAKNT
CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
AEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ
CCEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGT
HHHHHEEEEECCCCEEEECCCCCHHHHCCCCCCCHHHHCCCHHEEECCCCCCCCHHHHCC
KASAIYVLTVGAGETQIIKLRLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLS
CCEEEEEEEECCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
EDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPPERRNGRNKEWFHLYNEDILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEECHHHHC
MPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN
CCCCCCCCCEEEHHHHHHHCEEEEECCCHHHHHHHEEHHHHEECCCCCCCCEEEECCCCC
PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGL
CCCEEEEEEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCC
DNIGVFDRSATLPTGGHIDQSDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVRSMVGLIPLFAIETIEPDTLK
HHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS
HCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIES
HHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
LQKLYYYLGDDFQVECPTGSGKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQN
HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
DTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQHLGEKSL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
YRWGEDGLLGICDNHQRLCFAIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNT
HCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCC
PTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELIDTGVFDYDKYFDVFVEYAKNT
CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
AEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ
CCEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGT
HHHHHEEEEECCCCEEEECCCCCHHHHCCCCCCCHHHHCCCHHEEECCCCCCCCHHHHCC
KASAIYVLTVGAGETQIIKLRLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLS
CCEEEEEEEECCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
EDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPPERRNGRNKEWFHLYNEDILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEECHHHHC
MPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN
CCCCCCCCCEEEHHHHHHHCEEEEECCCHHHHHHHEEHHHHEECCCCCCCCEEEECCCCC
PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGL
CCCEEEEEEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCC
DNIGVFDRSATLPTGGHIDQSDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVRSMVGLIPLFAIETIEPDTLK
HHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS
HCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIES
HHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
LQKLYYYLGDDFQVECPTGSGKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQN
HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
DTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQHLGEKSL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA