| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908980
Identifier: 75908980
GI number: 75908980
Start: 3416647
End: 3419307
Strand: Direct
Name: 75908980
Synonym: Ava_2768
Alternate gene names: NA
Gene position: 3416647-3419307 (Clockwise)
Preceding gene: 75908979
Following gene: 75908983
Centisome position: 53.67
GC content: 38.59
Gene sequence:
>2661_bases ATGACAGCAAATCTCACCCAAGAAGAACTTAGATTACAAGCAGCCAGGGATCACATAGCTCATTGGCGTAGATGGGGACC ATATTTGAGCGATCGCCAGTGGGGAACAGTGCGCGAAGATTATAGTTCTCATGGGAATGCGTGGGACTATTTCACCCATG ATCAAGCTCGTTCTCGCGCTTACCGTTGGGGTGAAGACGGGTTATTGGGGATTTGTGATAATCATCAACGGCTTTGTTTT GCGATCGCTCTTTGGAATGGTGAAGATTCTATTCTCAAAGAAAGAATTTTTGGTTTAACGGGAAATGAAGGTAATCATGG GGAAGATGTTAAAGAATATTACTTTTATTTAGATAACACCCCCACCCATGCTTACATGAAGGCTTTGTATAAATATCCCC AAACAGCCTTCCCCTACTCCCAGTTAGTAACAGAAAATCAGCGCCGCAATCGTCGGGATGCAGAATTTGAACTGATAGAT ACGGGTGTATTTGATTATGATAAATACTTTGATGTATTTGTTGAATATGCCAAGAATACTGCCGAGGATATTCTCATTCA AATTACGGTAATTAATCGAGGAACAGAAGCCAAGACACTGCACTTATTACCTACGATTTGGTTTCATAATACTTGGTCTT GGAATGGAGATACAAATAAACCTATTTTGCAATTAGTAAAATTAAGTGATGATTTTCAGACCATAGCAGCCCACCATCAA ACTTTAGGTGAAAGATGGCTATACTGTCAACAACCAAATGAGATTCTTTTTACAGAAAACGAAACAAATATACAGAAATT ATTTGGTTATCCTAATACATCTGCTTATGTTAAAGATGGAATTAATGACTATATTGTTAACGGCAAAAAATCAGCAGTAA ATCCTGAACAGGTGGGAACAAAAGCCTCTGCCATCTATGTGTTAACAGTTGGTGCAGGTGAAACGCAGATTATCAAATTA AGACTATCTGATACACCTGATTTGATTGAACCATTTGGACAGGAATTTAGTATAATTTTCAGTCAACGCCAAAGGGAAGC AGATGAATTTTATCAGCGCGTTACGCCATTTCAATTAAGTGAAGATATGCGAAATGTGCAGCGACAAGCATTTGCAGGAA TGCTGTGGAGTAAGCAATTTTATCATTACATCGTCGAAGATTGGCTAAAAGGAGACACCCACACACCAAAGCCACCACCA GAACGCCGCAATGGTAGAAATAAAGAATGGTTTCATCTCTACAATGAAGATATTCTCTCCATGCCAGATAAGTGGGAATA TCCTTGGTTTGCTGCTTGGGATTTAGCATTTCATACCATCCCTTTGGCAATGATTGATCCGGATTTTGCTAAGTACCAAT TAGATGTTTTAACACGGGAATGGTATATGCACCCCAACGGGCAAATTCCGGCTTATGAATGGGCTTTTGGTGATGTTAAT CCTCCTGTTCATGCTTGGGCAACTTGGCGCATATATAAAATTGAACAGAAAATTTATGGACGAGCAGATAGACAGTTTTT AGAAAGAGTATTTCAAAAGCTGATGCTCAATTTTACCTGGTGGGTAAATCGTAAGGATGCTGAAGGTAATAATGTCTTCC AAGGAGGGTTTTTAGGATTAGATAACATTGGTGTATTTGACCGCAGTGCAACTTTACCTACGGGCGGACATATTGATCAA TCTGATGGTACAAGTTGGATGGGAATGTATTGTTTAAATATGTTAGCCATTGCTTTAGAATTAGCCAAGACTAATCCTGT TTATGAAGACATTGCCACTAAATTTTTTGAACATTTCCTTTACATAGCTGATGCTATGAATAAAATTGGTGAAATGGAAG CTAGTTTATGGAATGAAGTAGATGGTTTTTACTACGATGTGCTGCATCTACCTGAACGACAGATTACCTTAAAAGTGCGC TCAATGGTGGGACTAATTCCCCTATTTGCTATTGAAACTATTGAACCAGACACATTAAAAATGCTTCCTGGCTTTAAAAA GCGGCTGGAGTGGTTTATCAAAAACCGTCCAGATTTGCGACAAAATGTCGCTTGTATGGAAACAATAGGCATAGGCGCTA GAAGATTATTGGCAATAGTTTCACGGGATAAACTAAGACATATCCTCCAAAAAATGCTCGATGAAAGTGAATTTCTTAGC CTATATGGTATTCGCGCTCTTTCGAGATTTCATGCAGAACATCCCTATAAATTTGATGTCAACGGTTCTCAATTTCGTGT AGATTATGAACCGGCTGAATCTAGTAGTGGTTTATTTGGCGGTAATTCTAACTGGCGGGGGCCTATTTGGTTTCCGGTGA ATTTTCTCTTAATTGAATCTCTGCAAAAGTTATATTATTATCTAGGAGATGATTTTCAGGTGGAATGTCCTACAGGTTCT GGTAAGATGATGAATCTTTGGGAAGTAGCATCAGAATTATCCCAAAGATTAACTAGAATTTTCTTAAAGGATACTTCTGG TAAACGTCCTGTTTACGGTGCGACAGAGAAGTTTCAAAATGACACACATTGGCGTGATTTGATTTTATTTTATGAATATT TTCATGGTGATAATGGAGCAGGAATTGGTGCGAGTCATCAAACAGGATGGACAGGTTTAGTCGCTAAATTAATTCAGCAT CTGGGTGAAAAATCTTTGTAG
Upstream 100 bases:
>100_bases TTCTCTCCGCACCTCTGCGCCTCTGCGTGAAATAAATTCATCTTCTCACTCAGCAACGCCAGATTTTCCTATTTTCGACT CGATCAATGTGCATAACCCG
Downstream 100 bases:
>100_bases AGACGCGATAAATCGCGTCTCTACAAACATGAATCGTGTCTGTACTAGAATCCCCACAAACATGAATCGCGTCTGTAATA CAATCCCCACGTCTTCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 886; Mature: 885
Protein sequence:
>886_residues MTANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRAYRWGEDGLLGICDNHQRLCF AIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNTPTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELID TGVFDYDKYFDVFVEYAKNTAEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGTKASAIYVLTVGAGETQIIKL RLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLSEDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPP ERRNGRNKEWFHLYNEDILSMPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGLDNIGVFDRSATLPTGGHIDQ SDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFLYIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVR SMVGLIPLFAIETIEPDTLKMLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIESLQKLYYYLGDDFQVECPTGS GKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQNDTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQH LGEKSL
Sequences:
>Translated_886_residues MTANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRAYRWGEDGLLGICDNHQRLCF AIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNTPTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELID TGVFDYDKYFDVFVEYAKNTAEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGTKASAIYVLTVGAGETQIIKL RLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLSEDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPP ERRNGRNKEWFHLYNEDILSMPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGLDNIGVFDRSATLPTGGHIDQ SDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFLYIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVR SMVGLIPLFAIETIEPDTLKMLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIESLQKLYYYLGDDFQVECPTGS GKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQNDTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQH LGEKSL >Mature_885_residues TANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRAYRWGEDGLLGICDNHQRLCFA IALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNTPTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELIDT GVFDYDKYFDVFVEYAKNTAEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQT LGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGTKASAIYVLTVGAGETQIIKLR LSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLSEDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPPE RRNGRNKEWFHLYNEDILSMPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVNP PVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGLDNIGVFDRSATLPTGGHIDQS DGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFLYIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVRS MVGLIPLFAIETIEPDTLKMLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLSL YGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIESLQKLYYYLGDDFQVECPTGSG KMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQNDTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQHL GEKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323852, Length=937, Percent_Identity=52.9348986125934, Blast_Score=1002, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103240; Mature: 103109
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH YRWGEDGLLGICDNHQRLCFAIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNT HCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCC PTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELIDTGVFDYDKYFDVFVEYAKNT CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC AEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ CCEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGT HHHHHEEEEECCCCEEEECCCCCHHHHCCCCCCCHHHHCCCHHEEECCCCCCCCHHHHCC KASAIYVLTVGAGETQIIKLRLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLS CCEEEEEEEECCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH EDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPPERRNGRNKEWFHLYNEDILS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEECHHHHC MPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN CCCCCCCCCEEEHHHHHHHCEEEEECCCHHHHHHHEEHHHHEECCCCCCCCEEEECCCCC PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGL CCCEEEEEEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCC DNIGVFDRSATLPTGGHIDQSDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVRSMVGLIPLFAIETIEPDTLK HHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH MLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS HCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIES HHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH LQKLYYYLGDDFQVECPTGSGKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQN HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC DTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQHLGEKSL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TANLTQEELRLQAARDHIAHWRRWGPYLSDRQWGTVREDYSSHGNAWDYFTHDQARSRA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH YRWGEDGLLGICDNHQRLCFAIALWNGEDSILKERIFGLTGNEGNHGEDVKEYYFYLDNT HCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCC PTHAYMKALYKYPQTAFPYSQLVTENQRRNRRDAEFELIDTGVFDYDKYFDVFVEYAKNT CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC AEDILIQITVINRGTEAKTLHLLPTIWFHNTWSWNGDTNKPILQLVKLSDDFQTIAAHHQ CCEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH TLGERWLYCQQPNEILFTENETNIQKLFGYPNTSAYVKDGINDYIVNGKKSAVNPEQVGT HHHHHEEEEECCCCEEEECCCCCHHHHCCCCCCCHHHHCCCHHEEECCCCCCCCHHHHCC KASAIYVLTVGAGETQIIKLRLSDTPDLIEPFGQEFSIIFSQRQREADEFYQRVTPFQLS CCEEEEEEEECCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH EDMRNVQRQAFAGMLWSKQFYHYIVEDWLKGDTHTPKPPPERRNGRNKEWFHLYNEDILS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEECHHHHC MPDKWEYPWFAAWDLAFHTIPLAMIDPDFAKYQLDVLTREWYMHPNGQIPAYEWAFGDVN CCCCCCCCCEEEHHHHHHHCEEEEECCCHHHHHHHEEHHHHEECCCCCCCCEEEECCCCC PPVHAWATWRIYKIEQKIYGRADRQFLERVFQKLMLNFTWWVNRKDAEGNNVFQGGFLGL CCCEEEEEEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCC DNIGVFDRSATLPTGGHIDQSDGTSWMGMYCLNMLAIALELAKTNPVYEDIATKFFEHFL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YIADAMNKIGEMEASLWNEVDGFYYDVLHLPERQITLKVRSMVGLIPLFAIETIEPDTLK HHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH MLPGFKKRLEWFIKNRPDLRQNVACMETIGIGARRLLAIVSRDKLRHILQKMLDESEFLS HCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH LYGIRALSRFHAEHPYKFDVNGSQFRVDYEPAESSSGLFGGNSNWRGPIWFPVNFLLIES HHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH LQKLYYYLGDDFQVECPTGSGKMMNLWEVASELSQRLTRIFLKDTSGKRPVYGATEKFQN HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC DTHWRDLILFYEYFHGDNGAGIGASHQTGWTGLVAKLIQHLGEKSL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA