Click here to switch to the map view.

The map label for this gene is ndhE [H]

Identifier: 75908929

GI number: 75908929

Start: 3353998

End: 3354303

Strand: Direct

Name: ndhE [H]

Synonym: Ava_2717

Alternate gene names: 75908929

Gene position: 3353998-3354303 (Clockwise)

Preceding gene: 75908928

Following gene: 75908930

Centisome position: 52.69

GC content: 41.83

Gene sequence:

>306_bases
ATGCAACTTCAGTACTTTTTATTACTCGCAGCAGCTTTATTTTGTATTGGCATCTACGGTTTGATTACCAGCCGTAACGC
TGTACGCGTGTTGATGTCAATTGAATTACTGCTGAATGCTGTTAATCTGAATTTAATGGCATTTTCCAACTATCTTGACT
CAACATTAATTAAAGGTCAGGTTTTCACAGTGTTTGTGATTACCGTGGCAGCTGCTGAAGCGGCGGTTGGTTTAGCGATC
GTGCTGGCCATTTATCGCAACCGCGATACCGTCGATATGGAGCAGTTTAATCTCCTGAAATGGTAA

Upstream 100 bases:

>100_bases
CGTGTTGACATTACCAGAACGCCCCAGAGAATTAGTAGGCGCTGGTAGCGAAACTCAAGAGTAACAACAAGCCAGATTTT
CACAAGGAAGACAAAGATTC

Downstream 100 bases:

>100_bases
TTGCGTGTGCAACTCAAGCAGGTAATCATTGCTTATAAGGCGCGAGATTCCCAAAGCAAACGTTGGGCAGAACTCTGCGC
CAAGCAGCTAGAAAATCGCA

Product: NADH dehydrogenase subunit K

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase subunit 4L; NADH-plastoquinone oxidoreductase subunit 4L; NDH-1, subunit 4L; NDH-E [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MQLQYFLLLAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMAFSNYLDSTLIKGQVFTVFVITVAAAEAAVGLAI
VLAIYRNRDTVDMEQFNLLKW

Sequences:

>Translated_101_residues
MQLQYFLLLAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMAFSNYLDSTLIKGQVFTVFVITVAAAEAAVGLAI
VLAIYRNRDTVDMEQFNLLKW
>Mature_101_residues
MQLQYFLLLAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMAFSNYLDSTLIKGQVFTVFVITVAAAEAAVGLAI
VLAIYRNRDTVDMEQFNLLKW

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: COG0713

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 4L family [H]

Homologues:

Organism=Escherichia coli, GI1788615, Length=100, Percent_Identity=35, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 11233; Mature: 11233

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQYFLLLAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMAFSNYLDSTLIKGQ
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VFTVFVITVAAAEAAVGLAIVLAIYRNRDTVDMEQFNLLKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MQLQYFLLLAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMAFSNYLDSTLIKGQ
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VFTVFVITVAAAEAAVGLAIVLAIYRNRDTVDMEQFNLLKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]