Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908898

Identifier: 75908898

GI number: 75908898

Start: 3322589

End: 3323170

Strand: Direct

Name: 75908898

Synonym: Ava_2686

Alternate gene names: NA

Gene position: 3322589-3323170 (Clockwise)

Preceding gene: 75908895

Following gene: 75908900

Centisome position: 52.19

GC content: 35.91

Gene sequence:

>582_bases
ATGGCAATAATTAAGCACAATTTTTTAAATAACTCAGTAGATTCGTCAGAATTATTAGATCACAAAAATATTGAAGCGCA
GAGAATACAAGACGTTCAGCTTTTGCTGCAAAACTTATCTGAAAGTGAAGAAGCAACGATTAAGCTGATTCTAGATTGCC
TCTATGATATCGGTTCAGTCAACTTGATTAATCAAAGGTTTCGCTATCGACCCTTTAACCGAGTAGTTAAATTAATCGCT
CGGCTTTCTAAACCTATATTTAGAATCTATGGGTGGCATTGGTTTAAGAAAAATTGTCCTCAATTAATTGCTAATTGGTT
GCATTCCCAAGTAGCTTTTGAGTATGTAGTAAATACACCTGAACAAATAGCAGTTGCAGTCTCGGCAATTCAACAGCATC
AGCCATTGCCATTAGATCATTACAATCTTGAGGTTAAGGCTTTACGCAATCAAATAAGATGGCTAACGGGAATTACTATA
GTCTCGCTGTCAACCTTGGGAATAGTATTTACTATATTTAACAGCAATCCACAGATACTACTACGAAACATACCGCAATT
TCAACCAACAATCTGCCGATAA

Upstream 100 bases:

>100_bases
TAGCAATAAATCAAAAATAAATCAACTGTTTTTTTGGCTATTCTATATTTCCTTCTTTAGGTACTTAGCTAAAAACCCTC
ATATTTGGTATTTTACTGGT

Downstream 100 bases:

>100_bases
ATATTATATGTAAAAACAGTTATTTATTTTACAAAATATAGAGTGATAATTTGAGGATAAAAATTAAAAACAAATGACTT
ACTTGATTAAAATCCTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSVNLINQRFRYRPFNRVVKLIA
RLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTPEQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITI
VSLSTLGIVFTIFNSNPQILLRNIPQFQPTICR

Sequences:

>Translated_193_residues
MAIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSVNLINQRFRYRPFNRVVKLIA
RLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTPEQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITI
VSLSTLGIVFTIFNSNPQILLRNIPQFQPTICR
>Mature_192_residues
AIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSVNLINQRFRYRPFNRVVKLIAR
LSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTPEQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITIV
SLSTLGIVFTIFNSNPQILLRNIPQFQPTICR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22441; Mature: 22310

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSV
CCEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH
NLINQRFRYRPFNRVVKLIARLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTP
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
EQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITIVSLSTLGIVFTIFNSNPQIL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE
LRNIPQFQPTICR
ECCCCCCCCCCCC
>Mature Secondary Structure 
AIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSV
CEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH
NLINQRFRYRPFNRVVKLIARLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTP
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
EQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITIVSLSTLGIVFTIFNSNPQIL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE
LRNIPQFQPTICR
ECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA