| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908898
Identifier: 75908898
GI number: 75908898
Start: 3322589
End: 3323170
Strand: Direct
Name: 75908898
Synonym: Ava_2686
Alternate gene names: NA
Gene position: 3322589-3323170 (Clockwise)
Preceding gene: 75908895
Following gene: 75908900
Centisome position: 52.19
GC content: 35.91
Gene sequence:
>582_bases ATGGCAATAATTAAGCACAATTTTTTAAATAACTCAGTAGATTCGTCAGAATTATTAGATCACAAAAATATTGAAGCGCA GAGAATACAAGACGTTCAGCTTTTGCTGCAAAACTTATCTGAAAGTGAAGAAGCAACGATTAAGCTGATTCTAGATTGCC TCTATGATATCGGTTCAGTCAACTTGATTAATCAAAGGTTTCGCTATCGACCCTTTAACCGAGTAGTTAAATTAATCGCT CGGCTTTCTAAACCTATATTTAGAATCTATGGGTGGCATTGGTTTAAGAAAAATTGTCCTCAATTAATTGCTAATTGGTT GCATTCCCAAGTAGCTTTTGAGTATGTAGTAAATACACCTGAACAAATAGCAGTTGCAGTCTCGGCAATTCAACAGCATC AGCCATTGCCATTAGATCATTACAATCTTGAGGTTAAGGCTTTACGCAATCAAATAAGATGGCTAACGGGAATTACTATA GTCTCGCTGTCAACCTTGGGAATAGTATTTACTATATTTAACAGCAATCCACAGATACTACTACGAAACATACCGCAATT TCAACCAACAATCTGCCGATAA
Upstream 100 bases:
>100_bases TAGCAATAAATCAAAAATAAATCAACTGTTTTTTTGGCTATTCTATATTTCCTTCTTTAGGTACTTAGCTAAAAACCCTC ATATTTGGTATTTTACTGGT
Downstream 100 bases:
>100_bases ATATTATATGTAAAAACAGTTATTTATTTTACAAAATATAGAGTGATAATTTGAGGATAAAAATTAAAAACAAATGACTT ACTTGATTAAAATCCTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSVNLINQRFRYRPFNRVVKLIA RLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTPEQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITI VSLSTLGIVFTIFNSNPQILLRNIPQFQPTICR
Sequences:
>Translated_193_residues MAIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSVNLINQRFRYRPFNRVVKLIA RLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTPEQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITI VSLSTLGIVFTIFNSNPQILLRNIPQFQPTICR >Mature_192_residues AIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSVNLINQRFRYRPFNRVVKLIAR LSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTPEQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITIV SLSTLGIVFTIFNSNPQILLRNIPQFQPTICR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22441; Mature: 22310
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSV CCEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH NLINQRFRYRPFNRVVKLIARLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH EQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITIVSLSTLGIVFTIFNSNPQIL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE LRNIPQFQPTICR ECCCCCCCCCCCC >Mature Secondary Structure AIIKHNFLNNSVDSSELLDHKNIEAQRIQDVQLLLQNLSESEEATIKLILDCLYDIGSV CEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH NLINQRFRYRPFNRVVKLIARLSKPIFRIYGWHWFKKNCPQLIANWLHSQVAFEYVVNTP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH EQIAVAVSAIQQHQPLPLDHYNLEVKALRNQIRWLTGITIVSLSTLGIVFTIFNSNPQIL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE LRNIPQFQPTICR ECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA