| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908859
Identifier: 75908859
GI number: 75908859
Start: 3273845
End: 3274303
Strand: Direct
Name: 75908859
Synonym: Ava_2647
Alternate gene names: NA
Gene position: 3273845-3274303 (Clockwise)
Preceding gene: 75908858
Following gene: 75908865
Centisome position: 51.43
GC content: 44.66
Gene sequence:
>459_bases ATGGCTGATTTTCTGCCGTCGCCAGAACAAGAAGACAATCGTTCCGGTTTTGAGCCAGAACTAGGGGGTTTTTTGCGGGA TGCCCCAGAACGTTCTGGTTTTGAACCAGAATTGGGCGGAATACTGCGGCAAAAAGGTGTTTATGTTGACGAAATCACCT GTATTGGTTGCAAGCATTGCGCTCATGTGGCGCGGAACACATTCTACATTGAGCCTGATTATGGGCGATCGCGTGTAATT CGTCAAGATGGGGACGCGGAAGAAGTTATTCAAGAAGCAATCGATACTTGTCCGGTTGATTGTATTCATTGGGTTGATTA CACCGAACTCAAAAATTTAGAAGAAGACCGTAAATTCCAGGTAATTCCTGTTGTTGGCTACCCAGTAGACCATGCAGTGG CAACTACCGAAAAGCGGCGGAAAAAGCAAAAGTCAAAAAATAAAAAATCCCGTTATTAA
Upstream 100 bases:
>100_bases CAGTAGTGAAAGAAACTGCTCGTGTAGGCTTCCAGGTCTCCGAACAGCAAAAAAATGAAGATGGTTCGATTCGCCTAGTT GTACAGCGCTGGAGTGCGTA
Downstream 100 bases:
>100_bases CATAAAAAATTAAATCTATAAAAGTAAAAGGACTGTTAATAACAGCCCTTTTATTTTTGTGATTTTTTTTAAGTCTCGAT TTAGCATCAATCCGGTATTC
Product: ferredoxin
Products: NA
Alternate protein names: 3Fe-4S Ferredoxin; Ferredoxin-Like Protein; Ferredoxin 4Fe-4S Type; Ferrodoxin I
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MADFLPSPEQEDNRSGFEPELGGFLRDAPERSGFEPELGGILRQKGVYVDEITCIGCKHCAHVARNTFYIEPDYGRSRVI RQDGDAEEVIQEAIDTCPVDCIHWVDYTELKNLEEDRKFQVIPVVGYPVDHAVATTEKRRKKQKSKNKKSRY
Sequences:
>Translated_152_residues MADFLPSPEQEDNRSGFEPELGGFLRDAPERSGFEPELGGILRQKGVYVDEITCIGCKHCAHVARNTFYIEPDYGRSRVI RQDGDAEEVIQEAIDTCPVDCIHWVDYTELKNLEEDRKFQVIPVVGYPVDHAVATTEKRRKKQKSKNKKSRY >Mature_151_residues ADFLPSPEQEDNRSGFEPELGGFLRDAPERSGFEPELGGILRQKGVYVDEITCIGCKHCAHVARNTFYIEPDYGRSRVIR QDGDAEEVIQEAIDTCPVDCIHWVDYTELKNLEEDRKFQVIPVVGYPVDHAVATTEKRRKKQKSKNKKSRY
Specific function: Unknown
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17418; Mature: 17287
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFLPSPEQEDNRSGFEPELGGFLRDAPERSGFEPELGGILRQKGVYVDEITCIGCKHC CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHH AHVARNTFYIEPDYGRSRVIRQDGDAEEVIQEAIDTCPVDCIHWVDYTELKNLEEDRKFQ HHHHHCEEEECCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCCCCEE VIPVVGYPVDHAVATTEKRRKKQKSKNKKSRY EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADFLPSPEQEDNRSGFEPELGGFLRDAPERSGFEPELGGILRQKGVYVDEITCIGCKHC CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHH AHVARNTFYIEPDYGRSRVIRQDGDAEEVIQEAIDTCPVDCIHWVDYTELKNLEEDRKFQ HHHHHCEEEECCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCCCCEE VIPVVGYPVDHAVATTEKRRKKQKSKNKKSRY EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA