| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is menE [H]
Identifier: 75908849
GI number: 75908849
Start: 3262881
End: 3264272
Strand: Direct
Name: menE [H]
Synonym: Ava_2636
Alternate gene names: 75908849
Gene position: 3262881-3264272 (Clockwise)
Preceding gene: 75908848
Following gene: 75908852
Centisome position: 51.26
GC content: 39.3
Gene sequence:
>1392_bases ATGGAACAACCCCTAGCCTATCTGAATCGCCTCACTTCCCATGATTGGCTGATTGGTTATGACAGCCGAGAGTTTCACCA AAAAGCCACAGAACTGTACTTACAACTGAGTCAATTATCAACGCCAGAAACATCACCAAAAATTATCCTAGCCGAACGTG AACCAGTAAACTTTCTCGCTAGTTTTATCGCCGCCTGTGCTGCTAATTGCCAAGTTTTTCTCTGTAACCCAGATTGGGGT GAACAAGAATGGCATCAAGTATTTAATTTAGTACAACCCGATATTATTTTAGGCTTAGAAACTAAGGACAAATCAACTCA AACCTCAACAACTACTACCCACTATCCAATCCCCAATTCCCACTCCCCACTCATCATGATTCCCACCGGTGGTTCATCGG GACAAATTAAATTTGCCATTCACACTTGGGAAACCCTCACGGCTTCAGTGCAGGGATTTAGAGAATATTTTCACATCAAA CAAGTTAATTCATATTGTATTTTACCTCTATATCATGTCAGTGGTTTAATGCAGTTTATGCGTTCTTTTACCACAGACGG AAAGTTAGTAATTCAACCATTTAAATCATTAGAAAGCAGTCAAATATCCCCAATCAAACCTACAGAATTTTTCATATCTT TAGTCCCGACACAATTACAACGCCTACTACAAAACTTAGAATTAACTACATGGTTATCCCAATTCAACACCGTACTTTTA GGTGGTGCGCCAGCTTGGGATGAACTATTAGAAAAAGCCAAATTCCATAACATTCGATTAGCACCAACCTATGGAATGAC AGAAACCGCCTCCCAAATTGCCACCCTCAAACCAGATGATTTTTTGAATGGTAAAATTAACAGTGGTCAAATTCTTCCCC ATGCCCAAGTGACAATTTGTAATCAACAAGGGGAAGTTCTACCAGCAAATCACATAGGAAATATTACAATTCAAGCTCAA TCTTTATCCCTTGGTTATTATCCTCAACTTGTGGAGAACCAAAATTATTTCCAAGTAGATGATTTAGGTTTTTTAGATGG ACAAGGTTATCTAAACATTGTCGGCAGAAACAGCGACAAAATCATCACAGGTGGAGAAAACATCTACCCGATAGAAATAG AATCAGCCATCCGCGCCACACAAATGGTAGCTGATGTTTGCGTAATTGGTATACCAGATCAGCAATGGGGACAAGCATTA ACAGCAATTTATATTCCTAAAGACACCAATACATCTGTCAGTGAAATTAAAACTGCCATCTCCCATCAACTCAGCCGATT TAAAATCCCCAAACATTGGATATCATTAGATACCTTACCCCGCAACCCTCAAGGTAAAATCAGTCGCCAACAACTACAAC AAATAGCCCTGTTAAAAACAGAAACCAAGTAA
Upstream 100 bases:
>100_bases CACTCCAACTAGCAGCAGAATTATCTCGTGACAACAGGGCTGTTGGTTTTGGCGTTAACCACTTTTTTTACCAAGAAGCA GAAAACTGGCTGCAAAGTTT
Downstream 100 bases:
>100_bases AAAAACTCCGCGTATCTTTGCGCCTCCCTCCGCGCCCCTCCGCGTTTAAAAACAATTTTCACCAAACCTCTACCTAACCA GAAAACTCAGCCCGCAACTG
Product: O-succinylbenzoic acid--CoA ligase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MEQPLAYLNRLTSHDWLIGYDSREFHQKATELYLQLSQLSTPETSPKIILAEREPVNFLASFIAACAANCQVFLCNPDWG EQEWHQVFNLVQPDIILGLETKDKSTQTSTTTTHYPIPNSHSPLIMIPTGGSSGQIKFAIHTWETLTASVQGFREYFHIK QVNSYCILPLYHVSGLMQFMRSFTTDGKLVIQPFKSLESSQISPIKPTEFFISLVPTQLQRLLQNLELTTWLSQFNTVLL GGAPAWDELLEKAKFHNIRLAPTYGMTETASQIATLKPDDFLNGKINSGQILPHAQVTICNQQGEVLPANHIGNITIQAQ SLSLGYYPQLVENQNYFQVDDLGFLDGQGYLNIVGRNSDKIITGGENIYPIEIESAIRATQMVADVCVIGIPDQQWGQAL TAIYIPKDTNTSVSEIKTAISHQLSRFKIPKHWISLDTLPRNPQGKISRQQLQQIALLKTETK
Sequences:
>Translated_463_residues MEQPLAYLNRLTSHDWLIGYDSREFHQKATELYLQLSQLSTPETSPKIILAEREPVNFLASFIAACAANCQVFLCNPDWG EQEWHQVFNLVQPDIILGLETKDKSTQTSTTTTHYPIPNSHSPLIMIPTGGSSGQIKFAIHTWETLTASVQGFREYFHIK QVNSYCILPLYHVSGLMQFMRSFTTDGKLVIQPFKSLESSQISPIKPTEFFISLVPTQLQRLLQNLELTTWLSQFNTVLL GGAPAWDELLEKAKFHNIRLAPTYGMTETASQIATLKPDDFLNGKINSGQILPHAQVTICNQQGEVLPANHIGNITIQAQ SLSLGYYPQLVENQNYFQVDDLGFLDGQGYLNIVGRNSDKIITGGENIYPIEIESAIRATQMVADVCVIGIPDQQWGQAL TAIYIPKDTNTSVSEIKTAISHQLSRFKIPKHWISLDTLPRNPQGKISRQQLQQIALLKTETK >Mature_463_residues MEQPLAYLNRLTSHDWLIGYDSREFHQKATELYLQLSQLSTPETSPKIILAEREPVNFLASFIAACAANCQVFLCNPDWG EQEWHQVFNLVQPDIILGLETKDKSTQTSTTTTHYPIPNSHSPLIMIPTGGSSGQIKFAIHTWETLTASVQGFREYFHIK QVNSYCILPLYHVSGLMQFMRSFTTDGKLVIQPFKSLESSQISPIKPTEFFISLVPTQLQRLLQNLELTTWLSQFNTVLL GGAPAWDELLEKAKFHNIRLAPTYGMTETASQIATLKPDDFLNGKINSGQILPHAQVTICNQQGEVLPANHIGNITIQAQ SLSLGYYPQLVENQNYFQVDDLGFLDGQGYLNIVGRNSDKIITGGENIYPIEIESAIRATQMVADVCVIGIPDQQWGQAL TAIYIPKDTNTSVSEIKTAISHQLSRFKIPKHWISLDTLPRNPQGKISRQQLQQIALLKTETK
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=362, Percent_Identity=29.5580110497238, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI122937307, Length=256, Percent_Identity=26.5625, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI42544132, Length=265, Percent_Identity=26.0377358490566, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI115511026, Length=214, Percent_Identity=28.5046728971963, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI187761345, Length=385, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI187761343, Length=385, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI38505220, Length=260, Percent_Identity=26.1538461538462, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI157311624, Length=251, Percent_Identity=24.7011952191235, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI157311622, Length=251, Percent_Identity=24.7011952191235, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI27477105, Length=142, Percent_Identity=30.2816901408451, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1788595, Length=335, Percent_Identity=30.7462686567164, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI1788107, Length=350, Percent_Identity=26.2857142857143, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI145693145, Length=376, Percent_Identity=22.6063829787234, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI221142682, Length=206, Percent_Identity=29.126213592233, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786810, Length=457, Percent_Identity=22.9759299781182, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560308, Length=355, Percent_Identity=26.7605633802817, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17558820, Length=374, Percent_Identity=29.9465240641711, Blast_Score=112, Evalue=6e-25, Organism=Caenorhabditis elegans, GI32563687, Length=345, Percent_Identity=27.8260869565217, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557194, Length=301, Percent_Identity=26.9102990033223, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71994703, Length=352, Percent_Identity=24.1477272727273, Blast_Score=104, Evalue=7e-23, Organism=Caenorhabditis elegans, GI71994694, Length=352, Percent_Identity=24.1477272727273, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71994690, Length=352, Percent_Identity=24.1477272727273, Blast_Score=104, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17538037, Length=305, Percent_Identity=25.5737704918033, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17531443, Length=309, Percent_Identity=24.9190938511327, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559526, Length=386, Percent_Identity=24.8704663212435, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71985884, Length=365, Percent_Identity=23.5616438356164, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=305, Percent_Identity=27.5409836065574, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI24581924, Length=312, Percent_Identity=25.6410256410256, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI18859661, Length=385, Percent_Identity=24.6753246753247, Blast_Score=85, Evalue=9e-17, Organism=Drosophila melanogaster, GI24653035, Length=217, Percent_Identity=28.110599078341, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI161076582, Length=219, Percent_Identity=28.310502283105, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI19922652, Length=433, Percent_Identity=21.2471131639723, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI21355181, Length=493, Percent_Identity=21.7038539553753, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI21356441, Length=266, Percent_Identity=26.6917293233083, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24656500, Length=317, Percent_Identity=24.6056782334385, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648260, Length=264, Percent_Identity=26.1363636363636, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24648253, Length=235, Percent_Identity=26.8085106382979, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24648255, Length=235, Percent_Identity=27.2340425531915, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI20130357, Length=331, Percent_Identity=24.773413897281, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI21356947, Length=244, Percent_Identity=25.4098360655738, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI281365686, Length=236, Percent_Identity=25.8474576271186, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 51984; Mature: 51984
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQPLAYLNRLTSHDWLIGYDSREFHQKATELYLQLSQLSTPETSPKIILAEREPVNFLA CCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHH SFIAACAANCQVFLCNPDWGEQEWHQVFNLVQPDIILGLETKDKSTQTSTTTTHYPIPNS HHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCC HSPLIMIPTGGSSGQIKFAIHTWETLTASVQGFREYFHIKQVNSYCILPLYHVSGLMQFM CCCEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH RSFTTDGKLVIQPFKSLESSQISPIKPTEFFISLVPTQLQRLLQNLELTTWLSQFNTVLL HHHCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GGAPAWDELLEKAKFHNIRLAPTYGMTETASQIATLKPDDFLNGKINSGQILPHAQVTIC CCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHEECCCCCCCCCCCCCCEECCCCEEEEE NQQGEVLPANHIGNITIQAQSLSLGYYPQLVENQNYFQVDDLGFLDGQGYLNIVGRNSDK CCCCCEEECCCCCEEEEEEEEECCCCCHHHHCCCCCEEECCCEEECCCCEEEEEECCCCE IITGGENIYPIEIESAIRATQMVADVCVIGIPDQQWGQALTAIYIPKDTNTSVSEIKTAI EEECCCEEEEEEHHHHHHHHHHHHHHHEEECCCHHHCCEEEEEEECCCCCCCHHHHHHHH SHQLSRFKIPKHWISLDTLPRNPQGKISRQQLQQIALLKTETK HHHHHHCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MEQPLAYLNRLTSHDWLIGYDSREFHQKATELYLQLSQLSTPETSPKIILAEREPVNFLA CCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHH SFIAACAANCQVFLCNPDWGEQEWHQVFNLVQPDIILGLETKDKSTQTSTTTTHYPIPNS HHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCC HSPLIMIPTGGSSGQIKFAIHTWETLTASVQGFREYFHIKQVNSYCILPLYHVSGLMQFM CCCEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH RSFTTDGKLVIQPFKSLESSQISPIKPTEFFISLVPTQLQRLLQNLELTTWLSQFNTVLL HHHCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GGAPAWDELLEKAKFHNIRLAPTYGMTETASQIATLKPDDFLNGKINSGQILPHAQVTIC CCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHEECCCCCCCCCCCCCCEECCCCEEEEE NQQGEVLPANHIGNITIQAQSLSLGYYPQLVENQNYFQVDDLGFLDGQGYLNIVGRNSDK CCCCCEEECCCCCEEEEEEEEECCCCCHHHHCCCCCEEECCCEEECCCCEEEEEECCCCE IITGGENIYPIEIESAIRATQMVADVCVIGIPDQQWGQALTAIYIPKDTNTSVSEIKTAI EEECCCEEEEEEHHHHHHHHHHHHHHHEEECCCHHHCCEEEEEEECCCCCCCHHHHHHHH SHQLSRFKIPKHWISLDTLPRNPQGKISRQQLQQIALLKTETK HHHHHHCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA