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The map label for this gene is 75908794

Identifier: 75908794

GI number: 75908794

Start: 3188025

End: 3189251

Strand: Direct

Name: 75908794

Synonym: Ava_2580

Alternate gene names: NA

Gene position: 3188025-3189251 (Clockwise)

Preceding gene: 75908792

Following gene: 75908802

Centisome position: 50.08

GC content: 40.42

Gene sequence:

>1227_bases
ATGCTAAGGCGCTTAAGTCTCTTTATTACGACTGTGATTATTTGGCAACTTACCAGTTCTGTAACTCTAGCCAGGAGTAA
CGATCCTCAACAAGCAGACAGGTTTCCTCCTAGTCCATTGGAAATTACTAAGCCTGATCCGCTTGTACCCACTTTGCGAG
ATAAACAGCAGTTAACTGTTCCAGAAAGACAAAAGTTGGAAGCGGCGCTAGATGAGTTGAATCAACAAGCAACGGCAAAG
TTGCAAGCTGGGGATAATTTAGGGGCGTTTGAAATTTGGAACCGTGAACTACGCTTGCGCCGTTATTTAGGGGCTGTTAC
TGAAGTAAAAGCCCTGTCGCGGGTTGGTGAGATTGCATGGAATCAAAACGATAGCCAAGAGCTACTATATATTACTCAAA
GATTACAAGCAATTCAAAAACAGGTACAACTGCAAAACAAAAATGTGCAGCAAAGTGTTGACTTACCACTACTACAAGCC
TTGGGCGAAGCTTATCAGAAAGTGCGATCGCTAAAAGGTGCCATTACAGTTTATAGCGAAGTTTTAGCCACAGTTCGGGA
AAAACAAGATTTAGTTGCCCAAGTAAATACTCTCACAACCATAGGGGAACTCAATCTCAATTGGTTTGATTATCCCCAAG
CTGCTACCGCCTACGAGGAGTTGCTTAGATTAGCTACCTCTGGGGGTGAAAATCAAAATCAAGAGTTCACATACTTGCAA
AAGCTAGCTTATATTTATCAACAGTCTAAGCAAGCACAAAAATCTATTGATGTTTTAAACAAAATAAAAGCTATTTATTC
CCAGAATAATAATTTTACTCAATTGCCAACCTTACAGCTAGCGATCGCCGCTAATTATGAAACTTTAGCGCGAGAAAATC
CTGCTTTAATCGAAGCAGCTTTTAAAAACTATCAAGAAGCTTATATAACTGCATGGCAATTGCAACAGTATCCTAGTGCG
GCGGAAGCTGTACAGAAATTAATCTCACTGTACCGTTCTCAAGGACAGCTAGATGAAGCTTTGCAAGCCAGCGAAATTCT
TTTAGAAATACAAACACGAGCCGTCAATTTTTATGGTTTGATGGAGGCTTACGACCAAATAGGGAAATTATACTTAGAGC
GGAAAGACTCCTCAGCCGCACTCGCAGCATTTCAAAAGGGTTTAGAACTGGCGAGACAATTAAAACATCAAGAAGCTTAT
TTCACACAGCAAATTAACAGTATTTAA

Upstream 100 bases:

>100_bases
AGTTGATGCGTCTAATGGATTTGCAGTTAAAGTTATTAGGCAGCAACTTGTACCCATTATCGGTTACTTACCTTCATACC
CACAAAATCGTCAAATCCTT

Downstream 100 bases:

>100_bases
TATTGGTGATTGGTAATTGGTAATTGGTGATCGAGCATTACCCATTACCCATTACCCACCATATTTTCAGTTAGTAACTG
AACTTAATATTACACAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MLRRLSLFITTVIIWQLTSSVTLARSNDPQQADRFPPSPLEITKPDPLVPTLRDKQQLTVPERQKLEAALDELNQQATAK
LQAGDNLGAFEIWNRELRLRRYLGAVTEVKALSRVGEIAWNQNDSQELLYITQRLQAIQKQVQLQNKNVQQSVDLPLLQA
LGEAYQKVRSLKGAITVYSEVLATVREKQDLVAQVNTLTTIGELNLNWFDYPQAATAYEELLRLATSGGENQNQEFTYLQ
KLAYIYQQSKQAQKSIDVLNKIKAIYSQNNNFTQLPTLQLAIAANYETLARENPALIEAAFKNYQEAYITAWQLQQYPSA
AEAVQKLISLYRSQGQLDEALQASEILLEIQTRAVNFYGLMEAYDQIGKLYLERKDSSAALAAFQKGLELARQLKHQEAY
FTQQINSI

Sequences:

>Translated_408_residues
MLRRLSLFITTVIIWQLTSSVTLARSNDPQQADRFPPSPLEITKPDPLVPTLRDKQQLTVPERQKLEAALDELNQQATAK
LQAGDNLGAFEIWNRELRLRRYLGAVTEVKALSRVGEIAWNQNDSQELLYITQRLQAIQKQVQLQNKNVQQSVDLPLLQA
LGEAYQKVRSLKGAITVYSEVLATVREKQDLVAQVNTLTTIGELNLNWFDYPQAATAYEELLRLATSGGENQNQEFTYLQ
KLAYIYQQSKQAQKSIDVLNKIKAIYSQNNNFTQLPTLQLAIAANYETLARENPALIEAAFKNYQEAYITAWQLQQYPSA
AEAVQKLISLYRSQGQLDEALQASEILLEIQTRAVNFYGLMEAYDQIGKLYLERKDSSAALAAFQKGLELARQLKHQEAY
FTQQINSI
>Mature_408_residues
MLRRLSLFITTVIIWQLTSSVTLARSNDPQQADRFPPSPLEITKPDPLVPTLRDKQQLTVPERQKLEAALDELNQQATAK
LQAGDNLGAFEIWNRELRLRRYLGAVTEVKALSRVGEIAWNQNDSQELLYITQRLQAIQKQVQLQNKNVQQSVDLPLLQA
LGEAYQKVRSLKGAITVYSEVLATVREKQDLVAQVNTLTTIGELNLNWFDYPQAATAYEELLRLATSGGENQNQEFTYLQ
KLAYIYQQSKQAQKSIDVLNKIKAIYSQNNNFTQLPTLQLAIAANYETLARENPALIEAAFKNYQEAYITAWQLQQYPSA
AEAVQKLISLYRSQGQLDEALQASEILLEIQTRAVNFYGLMEAYDQIGKLYLERKDSSAALAAFQKGLELARQLKHQEAY
FTQQINSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46346; Mature: 46346

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRRLSLFITTVIIWQLTSSVTLARSNDPQQADRFPPSPLEITKPDPLVPTLRDKQQLTV
CCHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PERQKLEAALDELNQQATAKLQAGDNLGAFEIWNRELRLRRYLGAVTEVKALSRVGEIAW
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQNDSQELLYITQRLQAIQKQVQLQNKNVQQSVDLPLLQALGEAYQKVRSLKGAITVYSE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VLATVREKQDLVAQVNTLTTIGELNLNWFDYPQAATAYEELLRLATSGGENQNQEFTYLQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KLAYIYQQSKQAQKSIDVLNKIKAIYSQNNNFTQLPTLQLAIAANYETLARENPALIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHCCCHHHHHHH
FKNYQEAYITAWQLQQYPSAAEAVQKLISLYRSQGQLDEALQASEILLEIQTRAVNFYGL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MEAYDQIGKLYLERKDSSAALAAFQKGLELARQLKHQEAYFTQQINSI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA