| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908670
Identifier: 75908670
GI number: 75908670
Start: 3046830
End: 3047333
Strand: Direct
Name: 75908670
Synonym: Ava_2456
Alternate gene names: NA
Gene position: 3046830-3047333 (Clockwise)
Preceding gene: 75908669
Following gene: 75908673
Centisome position: 47.86
GC content: 47.22
Gene sequence:
>504_bases ATGAGAGATTACCTTTTGCGATCGCTACTTGTGAGCGGAGTCGTCATTGGCTGCGGATTTTCTCCATTGTCTGCTCAAGC ACAGCAACAACAAGCTACTGATGTTCAAGTTGCTGCATTAGTGGAAGCATTAAGACAAGCTGCACCGCAAACTGGTAAAA CCAACGATGGATTTTACAGTGCTTGGCAAGTTAAGCCGGAAACTCTCAGAGGTTGGTCGAGAACTTGTCTTAAAAAAGAA GTTACACCAACACAATTTGAAAATAACCCCACGTTAGCGCGTCAGGTAGTTTCTTGTATTACCCGTCGGGAGTTCAACCA GCAATTCCATGCTACCGGAAACAATGAAACTGCGGCTGTGCGTGGTGTAGCTTGTTGGTGGATGACTGGGGCATATACAG GCTGCAACACTGGTTTTACTGCTACCTATGTCCAAAAGGTGGTGGGACTATACCAGCAGCAGCGTTCCCAAGCCACAGCT AATACAGCAGGGCGATCGCGTTAA
Upstream 100 bases:
>100_bases GTAATAGTCCGACGATGAAGAGTAGTAAATCGGATATTCTTCCTCTGTTCCTTACCTTCATCTATTACTATTTAGTAGAT GTTGTCAGGTTGATTGAGAT
Downstream 100 bases:
>100_bases TTAGGAGTTCCAAATCTACCTTACACAACATGGGTGGCATCTTGCCCACCCTAAATTTTCTTCATTTTGGATCTTGAATT GATTGACTCCCTACAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRDYLLRSLLVSGVVIGCGFSPLSAQAQQQQATDVQVAALVEALRQAAPQTGKTNDGFYSAWQVKPETLRGWSRTCLKKE VTPTQFENNPTLARQVVSCITRREFNQQFHATGNNETAAVRGVACWWMTGAYTGCNTGFTATYVQKVVGLYQQQRSQATA NTAGRSR
Sequences:
>Translated_167_residues MRDYLLRSLLVSGVVIGCGFSPLSAQAQQQQATDVQVAALVEALRQAAPQTGKTNDGFYSAWQVKPETLRGWSRTCLKKE VTPTQFENNPTLARQVVSCITRREFNQQFHATGNNETAAVRGVACWWMTGAYTGCNTGFTATYVQKVVGLYQQQRSQATA NTAGRSR >Mature_167_residues MRDYLLRSLLVSGVVIGCGFSPLSAQAQQQQATDVQVAALVEALRQAAPQTGKTNDGFYSAWQVKPETLRGWSRTCLKKE VTPTQFENNPTLARQVVSCITRREFNQQFHATGNNETAAVRGVACWWMTGAYTGCNTGFTATYVQKVVGLYQQQRSQATA NTAGRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18371; Mature: 18371
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDYLLRSLLVSGVVIGCGFSPLSAQAQQQQATDVQVAALVEALRQAAPQTGKTNDGFYS CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE AWQVKPETLRGWSRTCLKKEVTPTQFENNPTLARQVVSCITRREFNQQFHATGNNETAAV EEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RGVACWWMTGAYTGCNTGFTATYVQKVVGLYQQQRSQATANTAGRSR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRDYLLRSLLVSGVVIGCGFSPLSAQAQQQQATDVQVAALVEALRQAAPQTGKTNDGFYS CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE AWQVKPETLRGWSRTCLKKEVTPTQFENNPTLARQVVSCITRREFNQQFHATGNNETAAV EEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RGVACWWMTGAYTGCNTGFTATYVQKVVGLYQQQRSQATANTAGRSR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA