| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908641
Identifier: 75908641
GI number: 75908641
Start: 3014328
End: 3014840
Strand: Direct
Name: 75908641
Synonym: Ava_2425
Alternate gene names: NA
Gene position: 3014328-3014840 (Clockwise)
Preceding gene: 75908640
Following gene: 75908642
Centisome position: 47.35
GC content: 40.74
Gene sequence:
>513_bases ATGAAATTTAAGTCAGCATCTGTAGGTATCGGCTTAAGCGTTCTCAGCAATTTGTTTTATCTCGGTGCTTTATCAACTCC TTTAGTTAATTCACAACGAGTCTTGGCTCAAGAAGTGGCTGCTTCCTGTCCTCTCCCACCAGAGATTGCTGTCACTTTCC TAGATTCTAAATGTGAAGCAGTCAAACTAGAACGTCCGCAAAAATTTTATCGCTACTATAGTAGTAGTACTAATAAATTT GGTAGGTATTTAACCACTAATCGATATAAAACAAACGTAGAAGTTATCAGGAATTTAGCGCTGAATCAAGAATGGGGCAA TCAGGCGACTACAATTCTCAAAGTCACTGTTCCTGCTGGTACAACGGTATATCAAGGCATTGTTGCCCCCCAAACTCCTG CTCAGTGCTACCCAGGGGGAGGTCAGCAGACTTTTATTCAAGATACCAGAGATCCCAATATCAAGTGGAATGACGTAGGA AATCTCAAAATAGAAGCATTTAGTTGCCCATAA
Upstream 100 bases:
>100_bases TGTCTTATCTGTCCTTGCATCTAGATTTTAATGCTGAGAAAATATTTATTTGTGAGTGCATTATAAATTACTCTCAAAAA TTTTATCAGGAAGAGCATAT
Downstream 100 bases:
>100_bases AATTTATGGAAATCAAAACCGAAAAGTTTCTCCATCTGATAGACCAAGCATTGAAGATTGCAGAACAGATGCGTACTGAA CTAGCGGATTCAGAGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKFKSASVGIGLSVLSNLFYLGALSTPLVNSQRVLAQEVAASCPLPPEIAVTFLDSKCEAVKLERPQKFYRYYSSSTNKF GRYLTTNRYKTNVEVIRNLALNQEWGNQATTILKVTVPAGTTVYQGIVAPQTPAQCYPGGGQQTFIQDTRDPNIKWNDVG NLKIEAFSCP
Sequences:
>Translated_170_residues MKFKSASVGIGLSVLSNLFYLGALSTPLVNSQRVLAQEVAASCPLPPEIAVTFLDSKCEAVKLERPQKFYRYYSSSTNKF GRYLTTNRYKTNVEVIRNLALNQEWGNQATTILKVTVPAGTTVYQGIVAPQTPAQCYPGGGQQTFIQDTRDPNIKWNDVG NLKIEAFSCP >Mature_170_residues MKFKSASVGIGLSVLSNLFYLGALSTPLVNSQRVLAQEVAASCPLPPEIAVTFLDSKCEAVKLERPQKFYRYYSSSTNKF GRYLTTNRYKTNVEVIRNLALNQEWGNQATTILKVTVPAGTTVYQGIVAPQTPAQCYPGGGQQTFIQDTRDPNIKWNDVG NLKIEAFSCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18745; Mature: 18745
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKSASVGIGLSVLSNLFYLGALSTPLVNSQRVLAQEVAASCPLPPEIAVTFLDSKCEA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHEEEEECCCCCE VKLERPQKFYRYYSSSTNKFGRYLTTNRYKTNVEVIRNLALNQEWGNQATTILKVTVPAG EECCCHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCC TTVYQGIVAPQTPAQCYPGGGQQTFIQDTRDPNIKWNDVGNLKIEAFSCP CHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEEEEEECCC >Mature Secondary Structure MKFKSASVGIGLSVLSNLFYLGALSTPLVNSQRVLAQEVAASCPLPPEIAVTFLDSKCEA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHEEEEECCCCCE VKLERPQKFYRYYSSSTNKFGRYLTTNRYKTNVEVIRNLALNQEWGNQATTILKVTVPAG EECCCHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCC TTVYQGIVAPQTPAQCYPGGGQQTFIQDTRDPNIKWNDVGNLKIEAFSCP CHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA