| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908582
Identifier: 75908582
GI number: 75908582
Start: 2945263
End: 2946414
Strand: Direct
Name: 75908582
Synonym: Ava_2365
Alternate gene names: NA
Gene position: 2945263-2946414 (Clockwise)
Preceding gene: 75908581
Following gene: 75908583
Centisome position: 46.27
GC content: 45.05
Gene sequence:
>1152_bases ATGACAGACCAACCTTCCGCCGCTACCCCAATGAATGCTGCTGCCATCCCTTTAAACAGAGTGTCAGCATCTACCCCAAT CAATGCAGCTCCAGCCAACAACAAGCCCAATAATGGTTCGAGCAAATCAATTCTCAGTGTTGACTTAGGCAGAACTTCCA CAAAAACCTGTGTCAGCCGCGAACCCAATAACGTTGTGTTCGTACCCGCCAACGTCAAGCAAATGTCAATAGAACAAGTA CGCGGGGGCGTTTTTGAAGCCCGTGCTACCGACCCGTTAATGGATTTGTGGTTGGAATATCAAGGCAAAGGCTATGCCGT TGGTCAATTAGCAGCAGACTTTGGGGCTAATTTGGGAGTAGGTCAATCTAAAGTAGAAGATGCACTAATTAAGGTACTGG CTAGTGCTGGCTACTTCAAACTCAAAGATGAAATTTCTGTTGTACTTGGTCTACCTTTTCTCTCGTTGGAACAATTTGAA CGGGAAAAAGCACAGTTAACTAGCCAAGTCACCGGGCCTCATGTTCTCAACTTTCGAGGTGAATCTGTATCTTTGAATAT CACCAAAGTTTGGGTCATGCCAGAAGGCTATGGTAGTCTTCTCTGGTCGGAAGCTCAACCTAAAAAAGGTGGTGCTAGTC CCGATTTTACAAAAATCTCCACAGCAATTGTTGATATTGGGCATCAAACTATTGATTTATTGATGGTCGATAATTTCCGC TTTGCACGCGGTGCTTCTAAGAGTGAAGATTTTGGCATGAACAAGTTCTATGAACTAGTAGCTGCCGAAATTGATGGTGC AGATAGTCAGTCTTTAGCCTTAATCTCTGCTGTTAACAAACCCAAAGGCGAACGCTTTTATCGTCCTAAAGGTGCTAGTA AACCAACCAACCTAGATGATTCTCTGCCCAACTTGATAGAGCAATTCTCTAGAGAAATTTGCAGTCGTGTGTTGGCTTGG TTGCCAGAACGTGTCACCGATGTGATTATCACAGGTGGTGGTGGGGAATTCTTCTGGGAAGATGTACAACGTCTACTTAA GGATGCTCAGATTAGCGCCCACTTAGCTGCTCCTTCTAGACAAGCGAACGCCTTGGGGCAGTATATTTATGGAGAGGCCC AATTATCCTCCAATCGTGCTGCTAGGGCTTAA
Upstream 100 bases:
>100_bases TTTATAGCTACACTTGACGAAACTCGGAAATTCTGGTATCCCCCATGTTTGTACGACGGGCATGATAACTTTTTACAGGT AAGTAAGCACGAGGAATTTT
Downstream 100 bases:
>100_bases AACGAATGTTCCAATGGTCAAAAAAAGTAGTTAAATCGGTTACGTTCAACCCAGAGGTCGCTGATGAAAGCTTGTTGGCG GTTGTAGAAAACTATCTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTDQPSAATPMNAAAIPLNRVSASTPINAAPANNKPNNGSSKSILSVDLGRTSTKTCVSREPNNVVFVPANVKQMSIEQV RGGVFEARATDPLMDLWLEYQGKGYAVGQLAADFGANLGVGQSKVEDALIKVLASAGYFKLKDEISVVLGLPFLSLEQFE REKAQLTSQVTGPHVLNFRGESVSLNITKVWVMPEGYGSLLWSEAQPKKGGASPDFTKISTAIVDIGHQTIDLLMVDNFR FARGASKSEDFGMNKFYELVAAEIDGADSQSLALISAVNKPKGERFYRPKGASKPTNLDDSLPNLIEQFSREICSRVLAW LPERVTDVIITGGGGEFFWEDVQRLLKDAQISAHLAAPSRQANALGQYIYGEAQLSSNRAARA
Sequences:
>Translated_383_residues MTDQPSAATPMNAAAIPLNRVSASTPINAAPANNKPNNGSSKSILSVDLGRTSTKTCVSREPNNVVFVPANVKQMSIEQV RGGVFEARATDPLMDLWLEYQGKGYAVGQLAADFGANLGVGQSKVEDALIKVLASAGYFKLKDEISVVLGLPFLSLEQFE REKAQLTSQVTGPHVLNFRGESVSLNITKVWVMPEGYGSLLWSEAQPKKGGASPDFTKISTAIVDIGHQTIDLLMVDNFR FARGASKSEDFGMNKFYELVAAEIDGADSQSLALISAVNKPKGERFYRPKGASKPTNLDDSLPNLIEQFSREICSRVLAW LPERVTDVIITGGGGEFFWEDVQRLLKDAQISAHLAAPSRQANALGQYIYGEAQLSSNRAARA >Mature_382_residues TDQPSAATPMNAAAIPLNRVSASTPINAAPANNKPNNGSSKSILSVDLGRTSTKTCVSREPNNVVFVPANVKQMSIEQVR GGVFEARATDPLMDLWLEYQGKGYAVGQLAADFGANLGVGQSKVEDALIKVLASAGYFKLKDEISVVLGLPFLSLEQFER EKAQLTSQVTGPHVLNFRGESVSLNITKVWVMPEGYGSLLWSEAQPKKGGASPDFTKISTAIVDIGHQTIDLLMVDNFRF ARGASKSEDFGMNKFYELVAAEIDGADSQSLALISAVNKPKGERFYRPKGASKPTNLDDSLPNLIEQFSREICSRVLAWL PERVTDVIITGGGGEFFWEDVQRLLKDAQISAHLAAPSRQANALGQYIYGEAQLSSNRAARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41368; Mature: 41237
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQPSAATPMNAAAIPLNRVSASTPINAAPANNKPNNGSSKSILSVDLGRTSTKTCVSR CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCC EPNNVVFVPANVKQMSIEQVRGGVFEARATDPLMDLWLEYQGKGYAVGQLAADFGANLGV CCCCEEEEECCCHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHCCCCCC GQSKVEDALIKVLASAGYFKLKDEISVVLGLPFLSLEQFEREKAQLTSQVTGPHVLNFRG CHHHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECC ESVSLNITKVWVMPEGYGSLLWSEAQPKKGGASPDFTKISTAIVDIGHQTIDLLMVDNFR CEEEEEEEEEEEECCCCHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCH FARGASKSEDFGMNKFYELVAAEIDGADSQSLALISAVNKPKGERFYRPKGASKPTNLDD HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCEECCCCCCCCCCCCH SLPNLIEQFSREICSRVLAWLPERVTDVIITGGGGEFFWEDVQRLLKDAQISAHLAAPSR HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCH QANALGQYIYGEAQLSSNRAARA HHHHHHHHHCCCCEECCCCCCCC >Mature Secondary Structure TDQPSAATPMNAAAIPLNRVSASTPINAAPANNKPNNGSSKSILSVDLGRTSTKTCVSR CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCC EPNNVVFVPANVKQMSIEQVRGGVFEARATDPLMDLWLEYQGKGYAVGQLAADFGANLGV CCCCEEEEECCCHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHCCCCCC GQSKVEDALIKVLASAGYFKLKDEISVVLGLPFLSLEQFEREKAQLTSQVTGPHVLNFRG CHHHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECC ESVSLNITKVWVMPEGYGSLLWSEAQPKKGGASPDFTKISTAIVDIGHQTIDLLMVDNFR CEEEEEEEEEEEECCCCHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCH FARGASKSEDFGMNKFYELVAAEIDGADSQSLALISAVNKPKGERFYRPKGASKPTNLDD HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCEECCCCCCCCCCCCH SLPNLIEQFSREICSRVLAWLPERVTDVIITGGGGEFFWEDVQRLLKDAQISAHLAAPSR HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCH QANALGQYIYGEAQLSSNRAARA HHHHHHHHHCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA