| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is mviM [H]
Identifier: 75908580
GI number: 75908580
Start: 2942982
End: 2944046
Strand: Direct
Name: mviM [H]
Synonym: Ava_2363
Alternate gene names: 75908580
Gene position: 2942982-2944046 (Clockwise)
Preceding gene: 75908578
Following gene: 75908581
Centisome position: 46.23
GC content: 44.69
Gene sequence:
>1065_bases ATGTCAGTGGCAGAACCAAATTCACATACACAGCGTAACCAGCCACGACCGATTCGCGTAGGCGTAATCGGCGTAGGTAA CATGGGACAACATCACACCCGTGTACTCAGTTCAATGAAAGATGTTGAACTGGTCGGTGTTTCCGACATCAACGTCGAAC GAGGCCTAGAAACCGCTAGTAAATACAAGGTGCGGTTTTTTGAAGATTACTGTGACCTGCTTCCTCATGTAGAAGCCGTG TGCATAGCCGTTCCCACTCGCTTACACTACGCTGTAGGCATCAACTGTTTGTTAGCGGGAATTCACGTTTTAATTGAAAA GCCGATCGCTGCTAGTATTTCTGAAGCAGAATCCCTTGTCAATGCTGCCGCCGAGTCTCAATGTATCCTCCAAGTTGGGC ATATTGAGCGCTTCAACCCAGCTTTTAGAGAACTGAGCAAAGTGATGAAAACTGAAGAAGTTCTCGCACTAGAAGCTCAC CGTATGAGTCCTTACTCAGACCGCGCCAATGATGTTTCAGTGGTACTGGATTTAATGATCCATGACATTGATTTACTGCT AGAATTAGCTGCCTCACCAGTAACAAAATTAACTGCCAGTGGAACCCGCGCCTTAGACTCTGGTTATTTGGATTATGTGA CTGCAACTCTAGGGTTTGCTAATGGGATTGTGGCAACTCTAACTGCCAGCAAAGTAACTCACCGAAAAATCCGTCGCATA GTTGCCCATTGTAAAAACTCTTTCACTGAAGCAGATTTTCTCAAAAACGAAATTTTGATACACCGTCAAACTTCTGCTAG CCCGGTCAATGACCATCGCCATTACAGGCAAGATGGTTTAATCGAGAAAGTTTATACTACTAACATTCAACCTTTGAGCG CAGAACTTGAGCATTTTGTCAACTGTGTACACGGTGGGAATCAACCTTCTGTGGGTGGTGAACAAGCCCTTAAAGCTCTC AGATTAGCAAGTTTAATTGAGCAAATGGCTCTAGAAGAAAGGGTATGGAACCCGTTAGACTGGCAATCAGAATCAAGAGT ACAATCACTGACTCAAAGCGTATAG
Upstream 100 bases:
>100_bases ACGGATCATAACTGGCTGTACTGGCTGTTTAGTATAAAAGCCAACGGCCATAGCGTCTCTAAGTTTGGTGGTTGAGGAGA GAACAATAGTGCAAAATAGC
Downstream 100 bases:
>100_bases ATGAGGCAAGAGAGCAGAGGCAAATACTTAGTCTAAGTCTTTCCCCCTCTGCTTTTTAAGTGCATATAAGCCTAAACTAT AGAATCATGCTGTTGACGCG
Product: oxidoreductase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSVAEPNSHTQRNQPRPIRVGVIGVGNMGQHHTRVLSSMKDVELVGVSDINVERGLETASKYKVRFFEDYCDLLPHVEAV CIAVPTRLHYAVGINCLLAGIHVLIEKPIAASISEAESLVNAAAESQCILQVGHIERFNPAFRELSKVMKTEEVLALEAH RMSPYSDRANDVSVVLDLMIHDIDLLLELAASPVTKLTASGTRALDSGYLDYVTATLGFANGIVATLTASKVTHRKIRRI VAHCKNSFTEADFLKNEILIHRQTSASPVNDHRHYRQDGLIEKVYTTNIQPLSAELEHFVNCVHGGNQPSVGGEQALKAL RLASLIEQMALEERVWNPLDWQSESRVQSLTQSV
Sequences:
>Translated_354_residues MSVAEPNSHTQRNQPRPIRVGVIGVGNMGQHHTRVLSSMKDVELVGVSDINVERGLETASKYKVRFFEDYCDLLPHVEAV CIAVPTRLHYAVGINCLLAGIHVLIEKPIAASISEAESLVNAAAESQCILQVGHIERFNPAFRELSKVMKTEEVLALEAH RMSPYSDRANDVSVVLDLMIHDIDLLLELAASPVTKLTASGTRALDSGYLDYVTATLGFANGIVATLTASKVTHRKIRRI VAHCKNSFTEADFLKNEILIHRQTSASPVNDHRHYRQDGLIEKVYTTNIQPLSAELEHFVNCVHGGNQPSVGGEQALKAL RLASLIEQMALEERVWNPLDWQSESRVQSLTQSV >Mature_353_residues SVAEPNSHTQRNQPRPIRVGVIGVGNMGQHHTRVLSSMKDVELVGVSDINVERGLETASKYKVRFFEDYCDLLPHVEAVC IAVPTRLHYAVGINCLLAGIHVLIEKPIAASISEAESLVNAAAESQCILQVGHIERFNPAFRELSKVMKTEEVLALEAHR MSPYSDRANDVSVVLDLMIHDIDLLLELAASPVTKLTASGTRALDSGYLDYVTATLGFANGIVATLTASKVTHRKIRRIV AHCKNSFTEADFLKNEILIHRQTSASPVNDHRHYRQDGLIEKVYTTNIQPLSAELEHFVNCVHGGNQPSVGGEQALKALR LASLIEQMALEERVWNPLDWQSESRVQSLTQSV
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=333, Percent_Identity=25.5255255255255, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 39109; Mature: 38978
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAEPNSHTQRNQPRPIRVGVIGVGNMGQHHTRVLSSMKDVELVGVSDINVERGLETAS CCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHCCHHHH KYKVRFFEDYCDLLPHVEAVCIAVPTRLHYAVGINCLLAGIHVLIEKPIAASISEAESLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NAAAESQCILQVGHIERFNPAFRELSKVMKTEEVLALEAHRMSPYSDRANDVSVVLDLMI HHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HDIDLLLELAASPVTKLTASGTRALDSGYLDYVTATLGFANGIVATLTASKVTHRKIRRI HHHHHHHHHHHCCHHHHHCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VAHCKNSFTEADFLKNEILIHRQTSASPVNDHRHYRQDGLIEKVYTTNIQPLSAELEHFV HHHHHHCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH NCVHGGNQPSVGGEQALKALRLASLIEQMALEERVWNPLDWQSESRVQSLTQSV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SVAEPNSHTQRNQPRPIRVGVIGVGNMGQHHTRVLSSMKDVELVGVSDINVERGLETAS CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHCCHHHH KYKVRFFEDYCDLLPHVEAVCIAVPTRLHYAVGINCLLAGIHVLIEKPIAASISEAESLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NAAAESQCILQVGHIERFNPAFRELSKVMKTEEVLALEAHRMSPYSDRANDVSVVLDLMI HHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HDIDLLLELAASPVTKLTASGTRALDSGYLDYVTATLGFANGIVATLTASKVTHRKIRRI HHHHHHHHHHHCCHHHHHCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VAHCKNSFTEADFLKNEILIHRQTSASPVNDHRHYRQDGLIEKVYTTNIQPLSAELEHFV HHHHHHCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH NCVHGGNQPSVGGEQALKALRLASLIEQMALEERVWNPLDWQSESRVQSLTQSV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]