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The map label for this gene is crtI [H]

Identifier: 75908559

GI number: 75908559

Start: 2905961

End: 2907478

Strand: Direct

Name: crtI [H]

Synonym: Ava_2342

Alternate gene names: 75908559

Gene position: 2905961-2907478 (Clockwise)

Preceding gene: 75908556

Following gene: 75908560

Centisome position: 45.65

GC content: 46.31

Gene sequence:

>1518_bases
ATGTCTAATATTGTTAAGCAAGACAAACCCCGTGTAGTCGTGATTGGTGCGGGAATTGGTGGACTGACGGCTGCTGCATT
ATTAGCCCATCGTGGCTACAGCGTTCTCATCTTAGACCAAGCCCTCGTTCCTGGGGGTTGTGCTTCTACATTTAAACGCC
AAGGATTCACCTTTGATGTGGGTGCAACTCAGGTTGCAGGCTTAGAACCGGGGGGAATCCATCACCGCATCTTTTCCGAA
CTGGAAATAGATTTACCAGATGCAACGCCTTGTGACCCCGCTTGTGCAGTTTATTTACCTGGGGAAAATACACCCATCAA
TGTCTGGCGCGACCCCCAAAAATGGCAAGAAGAACGCCAAAAACAATTTCCTGGGAGTGAACCATTTTGGCAACTCATGA
CTACTTTATTTAATGCCAGTTGGGAGTTTCAAGGACGCGATCCAGTTTTACCGCCGCGTAATTTGTGGGATTTGTGGCAG
TTAACCCAAGCAGTAAGACCTAGTACCTTCGTTACTGTACCCTTTACATTATTTACTGTGGGTGATGCTTTAAGGTTGTG
TGGGTTGGGAAATGACCACCGACTAAGAACGTTTTTAGATTTGCAACTCAAGCTATATTCTCAAGTCAACGCTGAAGAGA
CAGCTTTACTTTATGCGGCAACGGCGTTGAGTGTGTCCCAACTACCACAGGGATTGTTTCACCTAGAAGGTAGTATGCAG
GTATTGAGCGATCGCCTAGTCGAAGCTTTAGAAAGAGATGGTGGTAAATTGTTGATGCGTCATACCGTTGAACAAATTAA
AGTAGAAAACGGTAAAGCCTCTGCTGTCGTTATCAGAAACCAAAAAACAGGGGAAGTTTGGACAGAAGCAGCAGACCACG
TAGTTGCTAACGTGACTGTGCAGAACTTAGTGCAACTCTTGGGTGACAAGACTCCATCAGGCTATAAACAGCGCGTTAAT
AAACTCCCCCAAGCATCAGGGGCATTTGTCCTGTATTTAGGTGTAGATGCTAGCGCTATCCCAACCGAGTGTCCCCCCCA
CTTGCAATTTTTATATGATGCTGATGGCCCAATTGGGGAAAATAATTCTTTGTTTGTGTCGGTGAGTCATGCTGGTGACG
GTCGCGCGCCAGAAGGACAAGCCACAATTATTGCCTCATCTTTCGTAGATCCCAAACAGTGGTGGAGTACGGAAGATTAC
CCAGGTTTGAAACAGAAATTTACCCAAGAAGCGATCGCCAAATTAGCCCAGTACTTTTATCTCAAACCAGAGACAATTAT
TTATCAAGAAGCTGCCACACCGCGCACCTTTGCCCATTACACCGGACGCGATCGCGGTATAGTCGGCGGTATTGGTCAAA
GAATCCCCACATTTGGCCCCTTTGGTTTTGCGAATCGTACCCCCATTGACCATCTATGGTTAGTTGGTGACTCTACCCAC
CCAGGAGAAGGAACAGCAGGTGTAAGCTATTCGGCCTTGACTGTAGTTAGGCAAATTAGTCATAGTCAAAAATATTGA

Upstream 100 bases:

>100_bases
TTCTTCGTCTCATAGAAAAACAACGCACAACTAACAACTGACCATTGACACCCAGAGAGCAGTAAAATTATGAGTAGTAA
TATTAATTTTTGTAAAGTAA

Downstream 100 bases:

>100_bases
ACTGTTGACTATTGACCGATAACTCCTAACGGATAAGGATATATTTATCCTAGACTTACACTTTAGATAGTGATAAATTT
CGCATAACATTAAGTATCTA

Product: amine oxidase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSNIVKQDKPRVVVIGAGIGGLTAAALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDVGATQVAGLEPGGIHHRIFSE
LEIDLPDATPCDPACAVYLPGENTPINVWRDPQKWQEERQKQFPGSEPFWQLMTTLFNASWEFQGRDPVLPPRNLWDLWQ
LTQAVRPSTFVTVPFTLFTVGDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEAADHVVANVTVQNLVQLLGDKTPSGYKQRVN
KLPQASGAFVLYLGVDASAIPTECPPHLQFLYDADGPIGENNSLFVSVSHAGDGRAPEGQATIIASSFVDPKQWWSTEDY
PGLKQKFTQEAIAKLAQYFYLKPETIIYQEAATPRTFAHYTGRDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
PGEGTAGVSYSALTVVRQISHSQKY

Sequences:

>Translated_505_residues
MSNIVKQDKPRVVVIGAGIGGLTAAALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDVGATQVAGLEPGGIHHRIFSE
LEIDLPDATPCDPACAVYLPGENTPINVWRDPQKWQEERQKQFPGSEPFWQLMTTLFNASWEFQGRDPVLPPRNLWDLWQ
LTQAVRPSTFVTVPFTLFTVGDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEAADHVVANVTVQNLVQLLGDKTPSGYKQRVN
KLPQASGAFVLYLGVDASAIPTECPPHLQFLYDADGPIGENNSLFVSVSHAGDGRAPEGQATIIASSFVDPKQWWSTEDY
PGLKQKFTQEAIAKLAQYFYLKPETIIYQEAATPRTFAHYTGRDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
PGEGTAGVSYSALTVVRQISHSQKY
>Mature_504_residues
SNIVKQDKPRVVVIGAGIGGLTAAALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDVGATQVAGLEPGGIHHRIFSEL
EIDLPDATPCDPACAVYLPGENTPINVWRDPQKWQEERQKQFPGSEPFWQLMTTLFNASWEFQGRDPVLPPRNLWDLWQL
TQAVRPSTFVTVPFTLFTVGDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQV
LSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEAADHVVANVTVQNLVQLLGDKTPSGYKQRVNK
LPQASGAFVLYLGVDASAIPTECPPHLQFLYDADGPIGENNSLFVSVSHAGDGRAPEGQATIIASSFVDPKQWWSTEDYP
GLKQKFTQEAIAKLAQYFYLKPETIIYQEAATPRTFAHYTGRDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTHP
GEGTAGVSYSALTVVRQISHSQKY

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55419; Mature: 55288

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIVKQDKPRVVVIGAGIGGLTAAALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDV
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCEEEC
GATQVAGLEPGGIHHRIFSELEIDLPDATPCDPACAVYLPGENTPINVWRDPQKWQEERQ
CCCEECCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHH
KQFPGSEPFWQLMTTLFNASWEFQGRDPVLPPRNLWDLWQLTQAVRPSTFVTVPFTLFTV
HHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCEEEHH
GDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHCCHHEECCCHHH
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEAADHVVANVTV
HHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHEEHHHH
QNLVQLLGDKTPSGYKQRVNKLPQASGAFVLYLGVDASAIPTECPPHLQFLYDADGPIGE
HHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC
NNSLFVSVSHAGDGRAPEGQATIIASSFVDPKQWWSTEDYPGLKQKFTQEAIAKLAQYFY
CCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC
LKPETIIYQEAATPRTFAHYTGRDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
CCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PGEGTAGVSYSALTVVRQISHSQKY
CCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNIVKQDKPRVVVIGAGIGGLTAAALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDV
CCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCEEEC
GATQVAGLEPGGIHHRIFSELEIDLPDATPCDPACAVYLPGENTPINVWRDPQKWQEERQ
CCCEECCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHH
KQFPGSEPFWQLMTTLFNASWEFQGRDPVLPPRNLWDLWQLTQAVRPSTFVTVPFTLFTV
HHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCEEEHH
GDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHCCHHEECCCHHH
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEAADHVVANVTV
HHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHEEHHHH
QNLVQLLGDKTPSGYKQRVNKLPQASGAFVLYLGVDASAIPTECPPHLQFLYDADGPIGE
HHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC
NNSLFVSVSHAGDGRAPEGQATIIASSFVDPKQWWSTEDYPGLKQKFTQEAIAKLAQYFY
CCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC
LKPETIIYQEAATPRTFAHYTGRDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
CCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PGEGTAGVSYSALTVVRQISHSQKY
CCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]