| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908546
Identifier: 75908546
GI number: 75908546
Start: 2892214
End: 2893614
Strand: Direct
Name: 75908546
Synonym: Ava_2329
Alternate gene names: NA
Gene position: 2892214-2893614 (Clockwise)
Preceding gene: 75908543
Following gene: 75908552
Centisome position: 45.43
GC content: 36.33
Gene sequence:
>1401_bases ATGAGTTTACCAATAACAGTAACCTTTATGCTTGCTGATTGGATTGTCAAAGGATTAGCAGATGGAACATTGGAACGAGT TGGTGGTGTAATTCGAGATAAAGGAACTAAGCAAGTTGTTACTTGGTTACGAAGCATGAACAATAATTCACCATTACCAA TACCAAATAAGTCATCTAACAATTTTCTGAATATTATTTTCTCTGGGGCAAATCTAGTTACTTCAGGTGTTAGTACTGCT GTAACGAAAAAAGGATTAGCTGACGTTAATCAGCGTTTAGGAGGGGTGGAACAAATAAATTTAGGCAACCTTGGTGTTTC AGGAGGAAATTTGGTTGCGACTGTTGCTAACACTGTTGTAACAGGAAAAGGATTAGCCGATGTTAACGGACGTTTAAGTG GTATTGATCATCAGTTAGAAGAACTAGGGCAAAATTTACAGTTTACTCAAGAGATTTTACAAGTAACTACAGCTGCTAGC CTACTTAATCTTGGTGTTTCAGTCATGGGTTTTGCTGTAATAGCACAACGTTTGAAAGAACTAGAAAAAAGTTTACAAGA GGCACAAGAGTTATTAACCAAAATTAATCGCAAAATTGATCTGAGTTTTTATGCTAATTTTCGTGCTGCCATTGAATTAG CAATTAATGCTTTCACAATGACAAAATCTGAAAATCGCAGAAGCAGCGCCTTACAAGCGATTAACCGATTTTTAGAAGCA GAACATATTTACACTGAATTGACCGACATTGAAATTGAGCAACAAAGCCAAATTGTTGATGAGTATCTTCTTACTCTATC TTTAGCATATCTAGCTGAAATACGTTGTTATTTAGAATTAGAAGAACATGAGACAGCATTACGGCGCTTCCAAGAAGGTG CAAGAGTTATACGTTCTCGAATTCAAAAATATGTTGACATTCTTTTAACTTCTAACCCCGCAGCATATCTACAACCTCAC TTGAAAGGTCAGACTGATCTAAAAAGATTAACCCAAATTTACCAATGGATTGATCCGACTTTGGAAGAAAATGCAGTCTT TGAAATGCACCGTGAGAATTTATTTAAAATGGCGCAAGAACCTCATAAATGGGTAGAATGGCTACCACCAGCAATATTAA CTCGCACTGAAATTCAAGGAGGATGGCTAGGACCAAATTCCAATGACTTGAAAAAAGAAGCTGATAAACGCCTACCTCAA ATATTAGAAGTCATGGAATCGATGGTAGAGACTAATCGACGTTTTGAATCATATCAAACAGAAATACAAGCAATATCTCA ACTTGGTATTAGCTTTCATGAATGGCTAAAATTATCGCCATCTACAGAAATTAAACCGGAAGGTGCAGAATTGATGTATA TCATTCCATCTCAGCCTTTAGATTTACAAGTATCGGATTGA
Upstream 100 bases:
>100_bases TACAAACCCAATTTGGGAATACTAACTAAAGTATAGCTACCTGACACATATAAGTAAGGTGGCTAATAATCATCTGAAGT TTAGCAATGAGGAGAATATT
Downstream 100 bases:
>100_bases TATATCAATAAAAAAAGCGAACTTTCGGGTTCGCCTTCAATCATTCTCTTGGTTTTTGAAAATCCAAATCTAAATCTTTG CTTCTTCCCTGACCAACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSLPITVTFMLADWIVKGLADGTLERVGGVIRDKGTKQVVTWLRSMNNNSPLPIPNKSSNNFLNIIFSGANLVTSGVSTA VTKKGLADVNQRLGGVEQINLGNLGVSGGNLVATVANTVVTGKGLADVNGRLSGIDHQLEELGQNLQFTQEILQVTTAAS LLNLGVSVMGFAVIAQRLKELEKSLQEAQELLTKINRKIDLSFYANFRAAIELAINAFTMTKSENRRSSALQAINRFLEA EHIYTELTDIEIEQQSQIVDEYLLTLSLAYLAEIRCYLELEEHETALRRFQEGARVIRSRIQKYVDILLTSNPAAYLQPH LKGQTDLKRLTQIYQWIDPTLEENAVFEMHRENLFKMAQEPHKWVEWLPPAILTRTEIQGGWLGPNSNDLKKEADKRLPQ ILEVMESMVETNRRFESYQTEIQAISQLGISFHEWLKLSPSTEIKPEGAELMYIIPSQPLDLQVSD
Sequences:
>Translated_466_residues MSLPITVTFMLADWIVKGLADGTLERVGGVIRDKGTKQVVTWLRSMNNNSPLPIPNKSSNNFLNIIFSGANLVTSGVSTA VTKKGLADVNQRLGGVEQINLGNLGVSGGNLVATVANTVVTGKGLADVNGRLSGIDHQLEELGQNLQFTQEILQVTTAAS LLNLGVSVMGFAVIAQRLKELEKSLQEAQELLTKINRKIDLSFYANFRAAIELAINAFTMTKSENRRSSALQAINRFLEA EHIYTELTDIEIEQQSQIVDEYLLTLSLAYLAEIRCYLELEEHETALRRFQEGARVIRSRIQKYVDILLTSNPAAYLQPH LKGQTDLKRLTQIYQWIDPTLEENAVFEMHRENLFKMAQEPHKWVEWLPPAILTRTEIQGGWLGPNSNDLKKEADKRLPQ ILEVMESMVETNRRFESYQTEIQAISQLGISFHEWLKLSPSTEIKPEGAELMYIIPSQPLDLQVSD >Mature_465_residues SLPITVTFMLADWIVKGLADGTLERVGGVIRDKGTKQVVTWLRSMNNNSPLPIPNKSSNNFLNIIFSGANLVTSGVSTAV TKKGLADVNQRLGGVEQINLGNLGVSGGNLVATVANTVVTGKGLADVNGRLSGIDHQLEELGQNLQFTQEILQVTTAASL LNLGVSVMGFAVIAQRLKELEKSLQEAQELLTKINRKIDLSFYANFRAAIELAINAFTMTKSENRRSSALQAINRFLEAE HIYTELTDIEIEQQSQIVDEYLLTLSLAYLAEIRCYLELEEHETALRRFQEGARVIRSRIQKYVDILLTSNPAAYLQPHL KGQTDLKRLTQIYQWIDPTLEENAVFEMHRENLFKMAQEPHKWVEWLPPAILTRTEIQGGWLGPNSNDLKKEADKRLPQI LEVMESMVETNRRFESYQTEIQAISQLGISFHEWLKLSPSTEIKPEGAELMYIIPSQPLDLQVSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52259; Mature: 52127
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPITVTFMLADWIVKGLADGTLERVGGVIRDKGTKQVVTWLRSMNNNSPLPIPNKSSN CCCCEEHHHHHHHHHHHHHCCCHHHHHCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC NFLNIIFSGANLVTSGVSTAVTKKGLADVNQRLGGVEQINLGNLGVSGGNLVATVANTVV CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHH TGKGLADVNGRLSGIDHQLEELGQNLQFTQEILQVTTAASLLNLGVSVMGFAVIAQRLKE CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKSLQEAQELLTKINRKIDLSFYANFRAAIELAINAFTMTKSENRRSSALQAINRFLEA HHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH EHIYTELTDIEIEQQSQIVDEYLLTLSLAYLAEIRCYLELEEHETALRRFQEGARVIRSR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHH IQKYVDILLTSNPAAYLQPHLKGQTDLKRLTQIYQWIDPTLEENAVFEMHRENLFKMAQE HHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC PHKWVEWLPPAILTRTEIQGGWLGPNSNDLKKEADKRLPQILEVMESMVETNRRFESYQT HHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQAISQLGISFHEWLKLSPSTEIKPEGAELMYIIPSQPLDLQVSD HHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEECC >Mature Secondary Structure SLPITVTFMLADWIVKGLADGTLERVGGVIRDKGTKQVVTWLRSMNNNSPLPIPNKSSN CCCEEHHHHHHHHHHHHHCCCHHHHHCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC NFLNIIFSGANLVTSGVSTAVTKKGLADVNQRLGGVEQINLGNLGVSGGNLVATVANTVV CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHH TGKGLADVNGRLSGIDHQLEELGQNLQFTQEILQVTTAASLLNLGVSVMGFAVIAQRLKE CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKSLQEAQELLTKINRKIDLSFYANFRAAIELAINAFTMTKSENRRSSALQAINRFLEA HHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH EHIYTELTDIEIEQQSQIVDEYLLTLSLAYLAEIRCYLELEEHETALRRFQEGARVIRSR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHH IQKYVDILLTSNPAAYLQPHLKGQTDLKRLTQIYQWIDPTLEENAVFEMHRENLFKMAQE HHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC PHKWVEWLPPAILTRTEIQGGWLGPNSNDLKKEADKRLPQILEVMESMVETNRRFESYQT HHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQAISQLGISFHEWLKLSPSTEIKPEGAELMYIIPSQPLDLQVSD HHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA