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The map label for this gene is 75908405

Identifier: 75908405

GI number: 75908405

Start: 2709496

End: 2711241

Strand: Direct

Name: 75908405

Synonym: Ava_2186

Alternate gene names: NA

Gene position: 2709496-2711241 (Clockwise)

Preceding gene: 75908404

Following gene: 75908406

Centisome position: 42.56

GC content: 40.44

Gene sequence:

>1746_bases
ATGTACCAACAATTACAAGATTCTTATCCTGCAAACGACGATGGTGCTGTTGAATTACAAAAGCACCAAAATTCTACGAA
AACCTCTTCTAAACTGCCGTCAGAAAAGTTAATTACCGACGACGTAAAGCTGAGGATGGAGGTAATTCAAAGCTTAACTG
AACCTTGCGATCGCAAAACATACAGCGAGAAAAAGAAAGAAGCTGCCGAAAAATTGGGCGTAACAATTCGTCAGGTAGAG
CGATTGCTGAAAAAATGGCGGGAAGAAGGGTTAGTTGGGCTAGCAACGACACGCGCAGATAAAGGAAAATACCGCCTTGA
ACAAGAATGGGTAGATTTTATAATTAATACTTACACCAATGGTAACAAGAAGGGTAAACAAATGACCCGCCATCAGGTGT
TTTTAAAGGTTAAAGGTGAAGCCAAGGAAAAAGGTCTTAAAAAAGGTGAGTATCCTAGTCACCAGTCAATTTATAGAATT
TTAGATAAACACATTGAGGGAAAAGAAAGAAAAGATAATGCACGTAGTCCTGGTTATTCAGGAGAGAAACTCACCCACAT
GACCCGTGATGGTCGAGAGTTGGAAGTTGAGGGCAGTAATGATGTCTGGCAATGTGACCATACTCGCTTAGATGTAATGT
TGGTAGATGAGTATGGAGTTTTAGACCGTCCTTGGTTAACTATTGTGATTGACTCCTACTCTCGTTGTGTAATGGGTTTT
TATTTGGGATTTGATCACCCTAGTTCTCAAATTGATGCCCTAGCTTTGCATCATGCGATTTTGCCCAAGTCCTATAGTTC
TGAGTACACATTGCGTCACGAATGGGTAGCTTATGGCAAGCCTAACTACTTCTACACTGATGGTGGTAAAGATTTTACTT
CTATCCACACAACAGAACAGGTTGCAGTGCAAATAGGTTTTTCTTGCGCTTTGAGAAGACGACCATCTGATGGTGGAATT
GTTGAACGCTTCTTCAAAACACTTAACGAGCAAGTATTAAATACTCTCCCCGGATATACAGGCTCAAATGTTCAACAACG
CCCAGAAAATGTTGATAAAAATGCTTGTCTCACTCTCAAGAATTTAGAGATGGTATTAGTACGCTACATCGTTGATGAGT
ACAACCAGCACACGGATGCCAGGATGAAAGACCAATCTCGAATTGGGCGTTGGGAAGCTGGATCGATGGTAGAACCATAT
CTTTATAATGAATTGGACTTAGCTATTTGTTTAATGAAACAAGAACGGCGCAAAGTTCAAAAGTATGGCTGTATTCAATT
TGAAAATTTGACCTATCGGGCAGACCATTTGAGAGGTCGAGATGGAGAAACTGTAGCACTAAGATATGACCCTGCCGATG
TAACTACGCTTCTTGTATACGAAATTAATGCAGACGGCACAGAAGAATTTCTCGATTATGCCCATGCTCAAAGTTTAGAA
ACAGAACACCTATCTTTAAGAGAACTCAAGGCAATTAATAAGCGGTTAAAAGAAGCAAGCGAAGAAATTAATAATGACTC
GATTTTAGAGGCAATGCTTGACCGTCAAGCTTTTGTAGAGCAAACAGTTAAACAAAACCGCAAACAACGCAGACAAGCAG
CAAGTGAGCAAGTTAATCCTGTAGAGCCAGTGGCTAAAAAATTTGCTGTCCCTGAGCCTAAAGAAGTCGAGACTGACAGC
GAACCAGATATGGAATTACCTAATTACGAGGTTCGTTACATGGATGAATTTTTTGAAGAGGATTAG

Upstream 100 bases:

>100_bases
ATTCCTCGCATCAAACACGTCAAGAACGGTGGGAATCAGGCTTAGGTTCTGCGTCTAAGATGATTGAAGAAAACTTTATC
CACACATTGTTAACTTAACA

Downstream 100 bases:

>100_bases
GTAGAGAATATGACGGATGCAAAACCATTAGACTTTATTCAGGAACCCACGCGAGAAATCCAAGCTCACATTGAACGTTT
AAGCCGCGCTCCTTACTTAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MYQQLQDSYPANDDGAVELQKHQNSTKTSSKLPSEKLITDDVKLRMEVIQSLTEPCDRKTYSEKKKEAAEKLGVTIRQVE
RLLKKWREEGLVGLATTRADKGKYRLEQEWVDFIINTYTNGNKKGKQMTRHQVFLKVKGEAKEKGLKKGEYPSHQSIYRI
LDKHIEGKERKDNARSPGYSGEKLTHMTRDGRELEVEGSNDVWQCDHTRLDVMLVDEYGVLDRPWLTIVIDSYSRCVMGF
YLGFDHPSSQIDALALHHAILPKSYSSEYTLRHEWVAYGKPNYFYTDGGKDFTSIHTTEQVAVQIGFSCALRRRPSDGGI
VERFFKTLNEQVLNTLPGYTGSNVQQRPENVDKNACLTLKNLEMVLVRYIVDEYNQHTDARMKDQSRIGRWEAGSMVEPY
LYNELDLAICLMKQERRKVQKYGCIQFENLTYRADHLRGRDGETVALRYDPADVTTLLVYEINADGTEEFLDYAHAQSLE
TEHLSLRELKAINKRLKEASEEINNDSILEAMLDRQAFVEQTVKQNRKQRRQAASEQVNPVEPVAKKFAVPEPKEVETDS
EPDMELPNYEVRYMDEFFEED

Sequences:

>Translated_581_residues
MYQQLQDSYPANDDGAVELQKHQNSTKTSSKLPSEKLITDDVKLRMEVIQSLTEPCDRKTYSEKKKEAAEKLGVTIRQVE
RLLKKWREEGLVGLATTRADKGKYRLEQEWVDFIINTYTNGNKKGKQMTRHQVFLKVKGEAKEKGLKKGEYPSHQSIYRI
LDKHIEGKERKDNARSPGYSGEKLTHMTRDGRELEVEGSNDVWQCDHTRLDVMLVDEYGVLDRPWLTIVIDSYSRCVMGF
YLGFDHPSSQIDALALHHAILPKSYSSEYTLRHEWVAYGKPNYFYTDGGKDFTSIHTTEQVAVQIGFSCALRRRPSDGGI
VERFFKTLNEQVLNTLPGYTGSNVQQRPENVDKNACLTLKNLEMVLVRYIVDEYNQHTDARMKDQSRIGRWEAGSMVEPY
LYNELDLAICLMKQERRKVQKYGCIQFENLTYRADHLRGRDGETVALRYDPADVTTLLVYEINADGTEEFLDYAHAQSLE
TEHLSLRELKAINKRLKEASEEINNDSILEAMLDRQAFVEQTVKQNRKQRRQAASEQVNPVEPVAKKFAVPEPKEVETDS
EPDMELPNYEVRYMDEFFEED
>Mature_581_residues
MYQQLQDSYPANDDGAVELQKHQNSTKTSSKLPSEKLITDDVKLRMEVIQSLTEPCDRKTYSEKKKEAAEKLGVTIRQVE
RLLKKWREEGLVGLATTRADKGKYRLEQEWVDFIINTYTNGNKKGKQMTRHQVFLKVKGEAKEKGLKKGEYPSHQSIYRI
LDKHIEGKERKDNARSPGYSGEKLTHMTRDGRELEVEGSNDVWQCDHTRLDVMLVDEYGVLDRPWLTIVIDSYSRCVMGF
YLGFDHPSSQIDALALHHAILPKSYSSEYTLRHEWVAYGKPNYFYTDGGKDFTSIHTTEQVAVQIGFSCALRRRPSDGGI
VERFFKTLNEQVLNTLPGYTGSNVQQRPENVDKNACLTLKNLEMVLVRYIVDEYNQHTDARMKDQSRIGRWEAGSMVEPY
LYNELDLAICLMKQERRKVQKYGCIQFENLTYRADHLRGRDGETVALRYDPADVTTLLVYEINADGTEEFLDYAHAQSLE
TEHLSLRELKAINKRLKEASEEINNDSILEAMLDRQAFVEQTVKQNRKQRRQAASEQVNPVEPVAKKFAVPEPKEVETDS
EPDMELPNYEVRYMDEFFEED

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 67247; Mature: 67247

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQQLQDSYPANDDGAVELQKHQNSTKTSSKLPSEKLITDDVKLRMEVIQSLTEPCDRKT
CCCCHHHCCCCCCCCCEEEHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YSEKKKEAAEKLGVTIRQVERLLKKWREEGLVGLATTRADKGKYRLEQEWVDFIINTYTN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
GNKKGKQMTRHQVFLKVKGEAKEKGLKKGEYPSHQSIYRILDKHIEGKERKDNARSPGYS
CCHHHHHHHHEEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
GEKLTHMTRDGRELEVEGSNDVWQCDHTRLDVMLVDEYGVLDRPWLTIVIDSYSRCVMGF
CCHHHHHCCCCCEEEEECCCCCEECCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHH
YLGFDHPSSQIDALALHHAILPKSYSSEYTLRHEWVAYGKPNYFYTDGGKDFTSIHTTEQ
HHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCHHHCCHHH
VAVQIGFSCALRRRPSDGGIVERFFKTLNEQVLNTLPGYTGSNVQQRPENVDKNACLTLK
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEHH
NLEMVLVRYIVDEYNQHTDARMKDQSRIGRWEAGSMVEPYLYNELDLAICLMKQERRKVQ
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHH
KYGCIQFENLTYRADHLRGRDGETVALRYDPADVTTLLVYEINADGTEEFLDYAHAQSLE
HHCCEEECCCEEEHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCC
TEHLSLRELKAINKRLKEASEEINNDSILEAMLDRQAFVEQTVKQNRKQRRQAASEQVNP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VEPVAKKFAVPEPKEVETDSEPDMELPNYEVRYMDEFFEED
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MYQQLQDSYPANDDGAVELQKHQNSTKTSSKLPSEKLITDDVKLRMEVIQSLTEPCDRKT
CCCCHHHCCCCCCCCCEEEHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YSEKKKEAAEKLGVTIRQVERLLKKWREEGLVGLATTRADKGKYRLEQEWVDFIINTYTN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
GNKKGKQMTRHQVFLKVKGEAKEKGLKKGEYPSHQSIYRILDKHIEGKERKDNARSPGYS
CCHHHHHHHHEEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
GEKLTHMTRDGRELEVEGSNDVWQCDHTRLDVMLVDEYGVLDRPWLTIVIDSYSRCVMGF
CCHHHHHCCCCCEEEEECCCCCEECCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHH
YLGFDHPSSQIDALALHHAILPKSYSSEYTLRHEWVAYGKPNYFYTDGGKDFTSIHTTEQ
HHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCHHHCCHHH
VAVQIGFSCALRRRPSDGGIVERFFKTLNEQVLNTLPGYTGSNVQQRPENVDKNACLTLK
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEHH
NLEMVLVRYIVDEYNQHTDARMKDQSRIGRWEAGSMVEPYLYNELDLAICLMKQERRKVQ
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHH
KYGCIQFENLTYRADHLRGRDGETVALRYDPADVTTLLVYEINADGTEEFLDYAHAQSLE
HHCCEEECCCEEEHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCC
TEHLSLRELKAINKRLKEASEEINNDSILEAMLDRQAFVEQTVKQNRKQRRQAASEQVNP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VEPVAKKFAVPEPKEVETDSEPDMELPNYEVRYMDEFFEED
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]