| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908378
Identifier: 75908378
GI number: 75908378
Start: 2671846
End: 2672706
Strand: Direct
Name: 75908378
Synonym: Ava_2159
Alternate gene names: NA
Gene position: 2671846-2672706 (Clockwise)
Preceding gene: 75908377
Following gene: 75908379
Centisome position: 41.97
GC content: 45.41
Gene sequence:
>861_bases ATGGGCAGTATTTGGGAATTAGATTTTTACTCCCGTCCGATTTTGGACGAAAATCAGAAAAAAGTTTGGGAAGTTGTAAT TTGTGAAAGTCCCTTAGATATTCGCACAAAGACGGATTCCTTATTTCGCTATGCACAATATTGTCCCAGCACTGAGGTCA ATTCAGTTTGGTTAAGGACAGCCATTCAAGAGGCAATTAGCAAGGCGGGGGAAGCACCAATCAAAATTCGCTTTTTCCGT CGCCAAATGAATAATATGATCGTCAAGGCTTGCGAAGATGCAGGTATTCCAGCTTTAGCCAGCCGACGCACCTTGGCGCT CAATCAATTGCTGAAGCAGCGCATGGAAGAGGTTTATCCCCAAGAACCAGGTTATCAAGGGGGAACGACTCCCTCAGTGC GTTTGGACAGTCCCTTACCGCAACGCTTACCTGATGCCTTGGAAGGACAACAATGGGTGTTTGTCTCTTTATCAGCTGCG GATTTAGCAGAAATGCCAGAATGGGAAATTGGTTTTAGTGAGGCATTTCCATTAGATTTTGTCCAGGTATCGCCGGAAAG CCGCATTCCTGGGGTATTGATTTTCTCCCCTAGAGCTTTGCCAATAGCGGGTTGGATGTCTGGTTTGGAGTTGGCATTTT TGAGAGTAGATACCAGCCAAGGAACAAGACTAGTTTTAGAAACTGGTGCTACGGAAAGTTGGATTTTAGCAAATATCAAA AATCCCACCACCTTACAAGAAGCTAGAGGTTTCGAGGAAGCAAAACAAAAGGCCAACGGTGTACATTTTATCGGCGTGCA GTCAAACCCGGAAGCGGAGTCTTTTGCTGGATTTTGGCTGTTACAAGAGGTAGGGGTGTAG
Upstream 100 bases:
>100_bases CCTTGCTCCCTGCCCCCTGCCCCTTTTCCTCTTGTTGACCAATCTTGGTAGAGTGAGAATATAAGCAAAATATAAACTCG CCAGATTTATACGGCAGAAC
Downstream 100 bases:
>100_bases GGGTATAGGGGTGTGGGGGTACAGGGGATAAGAGAGATATGGATTGTCTATCTTTTTCCCCAGTCCCCAATCCCCAATCC CCAATCCCCAATCCCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MGSIWELDFYSRPILDENQKKVWEVVICESPLDIRTKTDSLFRYAQYCPSTEVNSVWLRTAIQEAISKAGEAPIKIRFFR RQMNNMIVKACEDAGIPALASRRTLALNQLLKQRMEEVYPQEPGYQGGTTPSVRLDSPLPQRLPDALEGQQWVFVSLSAA DLAEMPEWEIGFSEAFPLDFVQVSPESRIPGVLIFSPRALPIAGWMSGLELAFLRVDTSQGTRLVLETGATESWILANIK NPTTLQEARGFEEAKQKANGVHFIGVQSNPEAESFAGFWLLQEVGV
Sequences:
>Translated_286_residues MGSIWELDFYSRPILDENQKKVWEVVICESPLDIRTKTDSLFRYAQYCPSTEVNSVWLRTAIQEAISKAGEAPIKIRFFR RQMNNMIVKACEDAGIPALASRRTLALNQLLKQRMEEVYPQEPGYQGGTTPSVRLDSPLPQRLPDALEGQQWVFVSLSAA DLAEMPEWEIGFSEAFPLDFVQVSPESRIPGVLIFSPRALPIAGWMSGLELAFLRVDTSQGTRLVLETGATESWILANIK NPTTLQEARGFEEAKQKANGVHFIGVQSNPEAESFAGFWLLQEVGV >Mature_285_residues GSIWELDFYSRPILDENQKKVWEVVICESPLDIRTKTDSLFRYAQYCPSTEVNSVWLRTAIQEAISKAGEAPIKIRFFRR QMNNMIVKACEDAGIPALASRRTLALNQLLKQRMEEVYPQEPGYQGGTTPSVRLDSPLPQRLPDALEGQQWVFVSLSAAD LAEMPEWEIGFSEAFPLDFVQVSPESRIPGVLIFSPRALPIAGWMSGLELAFLRVDTSQGTRLVLETGATESWILANIKN PTTLQEARGFEEAKQKANGVHFIGVQSNPEAESFAGFWLLQEVGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32036; Mature: 31905
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIWELDFYSRPILDENQKKVWEVVICESPLDIRTKTDSLFRYAQYCPSTEVNSVWLRT CCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEECHHHHHHHHHHCCCCCHHHHHHHH AIQEAISKAGEAPIKIRFFRRQMNNMIVKACEDAGIPALASRRTLALNQLLKQRMEEVYP HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC QEPGYQGGTTPSVRLDSPLPQRLPDALEGQQWVFVSLSAADLAEMPEWEIGFSEAFPLDF CCCCCCCCCCCCEEECCCCHHHCHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCCEE VQVSPESRIPGVLIFSPRALPIAGWMSGLELAFLRVDTSQGTRLVLETGATESWILANIK EEECCCCCCCEEEEECCCCCCHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECC NPTTLQEARGFEEAKQKANGVHFIGVQSNPEAESFAGFWLLQEVGV CCCHHHHHCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure GSIWELDFYSRPILDENQKKVWEVVICESPLDIRTKTDSLFRYAQYCPSTEVNSVWLRT CCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEECHHHHHHHHHHCCCCCHHHHHHHH AIQEAISKAGEAPIKIRFFRRQMNNMIVKACEDAGIPALASRRTLALNQLLKQRMEEVYP HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC QEPGYQGGTTPSVRLDSPLPQRLPDALEGQQWVFVSLSAADLAEMPEWEIGFSEAFPLDF CCCCCCCCCCCCEEECCCCHHHCHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCCEE VQVSPESRIPGVLIFSPRALPIAGWMSGLELAFLRVDTSQGTRLVLETGATESWILANIK EEECCCCCCCEEEEECCCCCCHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECC NPTTLQEARGFEEAKQKANGVHFIGVQSNPEAESFAGFWLLQEVGV CCCHHHHHCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA