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The map label for this gene is 75908344

Identifier: 75908344

GI number: 75908344

Start: 2626632

End: 2629160

Strand: Direct

Name: 75908344

Synonym: Ava_2125

Alternate gene names: NA

Gene position: 2626632-2629160 (Clockwise)

Preceding gene: 75908343

Following gene: 75908345

Centisome position: 41.26

GC content: 32.62

Gene sequence:

>2529_bases
ATGGTGTATGTATCACTTGATCTTGAGCAACTCAGAGAACAAGATACGAACTTTGTGCCTAAATCTCCTTTTCAGCACCA
AATTGAGGCATTTGAAAAACTTAGTAATACTTTTCGGCTTGACAATAAAAAACCAGGCAGTGGAATATTAGTGCTGCCTA
CAGGTGCAGGTAAAACATTTACGGCTGTAAGGTGGTTGTGTGATCATGTAGTTCCTAAAAATATTAAAATCCTTTGGTTA
GCTCCTTCATATTATTTATTGGATCAAGCATTCTCTACTTTTAAAGAAAATGCACGAGGAATTTCATATTCTAAAAAAAT
ATTAAATATTAGATGTGTTTCCAGCAATCCTTCTCATGCTAAAGCAGCATCTATAAAATCAACCGATGATATTATCATCA
TGACAGTACAAACAGCTATCAGTAATTTAAGCCCTAATGCTTTAGATGGTTCAGGTAATAAGGTGAAAACACCTTTTAGA
AAATTTATTGAAAATTGCAAAGAAACAGGTTTGTTTATAATAGTGGATGAAGCTCACCATTCACCTGCCTATGGTTGCAG
AAATTTATTAATTGGTGAGATAGGACTTAGATCAATAGTACCCAATTCAAATATACTTGGTCTAACAGCCACACCAACTT
ATACAGATAAGACTAGAAGAGGTTGGTTATGGAAAATATATAAGGATGGAGTTAACGGAGTTATCTATCAAGCAGATAAA
GAAGCCCTAATAGCACAAGATATTCTAGCTAGACCTAATTATATTGAAGTATCGACTGGTACAGAAATGGTAGTCGATGA
TAGATTATATGAAAAATTAGTTAAACAACACAAAGACCTTCCTGAATCAATCATAGAAACTCTTGCAAACGATAAACATA
GAAATAATCTTATAGTAAAAACTTATACATCAAATAAAGATATTTATGGTAAAACTATTATCTTTGCTGACCGTTGGTTT
CAATGTGTTTATATAAAAGATAAACTTCTTGAAAAAGGTATTAAAGCAGATGCTATTTATTCCCATATAGATGCTGATCC
AGGTTCATCTGAGGCACGTAATAAGCGTAGAGAAGATGAAAATAAAACAATTTTAGATGAATTTAGGAACAATAAACTTG
ATGTTTTAATAAACGTAAGGATGTTAACAGAGGGGGCTGATATTCCTAATGTTCAAAGTGTCTTTATTACTCGCCAAACA
ACAAGCTCTATTCTCATGACTCAAATGATAGGTAGAGCATTACGTGGTAAAAAAATAAAAGGTAACAGTGAAGCAAATGT
TGTTTTGTTCTTCGATGACTGGAAACGTTTAATTGATTGGGCTACACCACAAATTGGTGATACTAAAGATACAGGAAAAG
AATCAACAATAAAGAGTTATCCACTAGAGTATATATCGATTCGCTTAGTTGAGGAATTATCAAAATCAATTGAGAGCGGT
GGAGTCCATGAAGTAATATTCTCTAAAATTTTTCCTATTGGCTGGTATAAAACTGAAATTGTATATGCTGACTCTGACAA
AAATAATGAATCAATAGAAGCGTTTACCGAATATGTTATGGTTTATGACCATACACAATCCAAGCTTAATAAGTTTATTA
ACTTTATTCTTGATTTCAAGTTGCCAGTTGAGTGGTCTAAAGAATATCTTAATGATGAATCCCTCGAACAACAAATCGGA
GAATGGATAGATTCATGGTTTGATTGGAAAACTGATAATTTGGGTGACAAACTTAGTGCTGATTTAATTAAAATCGTCAG
ACATATTGCACAAAACCAATCTGCACCCGAATACTATTCATTTGACGAAAGAGAGAATTATGACTTAGATAGAATTGCCA
AAAGACTTATTGACTTTTCGCCGAGAGAAATAGATAAATACATAAACGAAGAGTTTGCAAAACCTGGAACATTATGGAAA
ACATTTTATAAAACGCCAAATCGCCTCATAACATCTGTTCATTTAGCTATCATTAAAATTATTCACGGGGGTGATAGTGA
AATACCTACTATTACCGTTATCTCTCCATCTCCACATAAAGATCGAGAACTTTCAGAAAAAGAAAAAGTAAAAGTAAAAA
AGCGAGACAGTTACACTTGCTTATGTTGTGGAGCCAATACTGAAGCTAAATTACAAGTTGACCACATTAAACCATTTTCT
ATGGGTGGGGAAACATCTATTCAGAATTCACAAACTTTATGTAATATTTGTAATAAATGCAAAGGAAAGAATGAAATTGA
CTTTCGATGTAATACAACAAAGTTGGCTATTCCCAAAAATTTAGATTTAACATTTAGAACAGAAAGCCAACATTCTATAA
GAACTTTAACAAGAGTAGTTAATTTATTTTATCATTGCAAAGCCATTTACAAAATTGAATGGGACAGTACCATCCGTGGA
TACATTATATATTTATATCCGGGAAATAATCCTCAATGGTTACTGCAACATAAAGCACAACTGCTGGAGTATATTCAAGA
TAAGCTTGGTCGCCAAGCTTATAATATTGTGGTCACTACAAAAGAATAA

Upstream 100 bases:

>100_bases
GCTGAGTGCTGTTAGTACACACAGAATCGTGGGAATCATAAGTTACGCATACAAGTTGTATTTATCCACAAAAGCTTACC
TTACAAAAAAGAGAATATTT

Downstream 100 bases:

>100_bases
ATCATAAAATCTGAAACAGAATGTATTTGGCACAACTTATTAATTCAGGGTGGCTACGGCAATAACTAAACCAGCCAAAT
CAGCAAAAGTGTAAATTTAT

Product: Type III restriction enzyme, res subunit

Products: NA

Alternate protein names: Helicase; DNA/RNA Helicase; Type III Restriction Res Subunit; Superfamily II Helicase; Nucleotide Protein; Type III Restriction

Number of amino acids: Translated: 842; Mature: 842

Protein sequence:

>842_residues
MVYVSLDLEQLREQDTNFVPKSPFQHQIEAFEKLSNTFRLDNKKPGSGILVLPTGAGKTFTAVRWLCDHVVPKNIKILWL
APSYYLLDQAFSTFKENARGISYSKKILNIRCVSSNPSHAKAASIKSTDDIIIMTVQTAISNLSPNALDGSGNKVKTPFR
KFIENCKETGLFIIVDEAHHSPAYGCRNLLIGEIGLRSIVPNSNILGLTATPTYTDKTRRGWLWKIYKDGVNGVIYQADK
EALIAQDILARPNYIEVSTGTEMVVDDRLYEKLVKQHKDLPESIIETLANDKHRNNLIVKTYTSNKDIYGKTIIFADRWF
QCVYIKDKLLEKGIKADAIYSHIDADPGSSEARNKRREDENKTILDEFRNNKLDVLINVRMLTEGADIPNVQSVFITRQT
TSSILMTQMIGRALRGKKIKGNSEANVVLFFDDWKRLIDWATPQIGDTKDTGKESTIKSYPLEYISIRLVEELSKSIESG
GVHEVIFSKIFPIGWYKTEIVYADSDKNNESIEAFTEYVMVYDHTQSKLNKFINFILDFKLPVEWSKEYLNDESLEQQIG
EWIDSWFDWKTDNLGDKLSADLIKIVRHIAQNQSAPEYYSFDERENYDLDRIAKRLIDFSPREIDKYINEEFAKPGTLWK
TFYKTPNRLITSVHLAIIKIIHGGDSEIPTITVISPSPHKDRELSEKEKVKVKKRDSYTCLCCGANTEAKLQVDHIKPFS
MGGETSIQNSQTLCNICNKCKGKNEIDFRCNTTKLAIPKNLDLTFRTESQHSIRTLTRVVNLFYHCKAIYKIEWDSTIRG
YIIYLYPGNNPQWLLQHKAQLLEYIQDKLGRQAYNIVVTTKE

Sequences:

>Translated_842_residues
MVYVSLDLEQLREQDTNFVPKSPFQHQIEAFEKLSNTFRLDNKKPGSGILVLPTGAGKTFTAVRWLCDHVVPKNIKILWL
APSYYLLDQAFSTFKENARGISYSKKILNIRCVSSNPSHAKAASIKSTDDIIIMTVQTAISNLSPNALDGSGNKVKTPFR
KFIENCKETGLFIIVDEAHHSPAYGCRNLLIGEIGLRSIVPNSNILGLTATPTYTDKTRRGWLWKIYKDGVNGVIYQADK
EALIAQDILARPNYIEVSTGTEMVVDDRLYEKLVKQHKDLPESIIETLANDKHRNNLIVKTYTSNKDIYGKTIIFADRWF
QCVYIKDKLLEKGIKADAIYSHIDADPGSSEARNKRREDENKTILDEFRNNKLDVLINVRMLTEGADIPNVQSVFITRQT
TSSILMTQMIGRALRGKKIKGNSEANVVLFFDDWKRLIDWATPQIGDTKDTGKESTIKSYPLEYISIRLVEELSKSIESG
GVHEVIFSKIFPIGWYKTEIVYADSDKNNESIEAFTEYVMVYDHTQSKLNKFINFILDFKLPVEWSKEYLNDESLEQQIG
EWIDSWFDWKTDNLGDKLSADLIKIVRHIAQNQSAPEYYSFDERENYDLDRIAKRLIDFSPREIDKYINEEFAKPGTLWK
TFYKTPNRLITSVHLAIIKIIHGGDSEIPTITVISPSPHKDRELSEKEKVKVKKRDSYTCLCCGANTEAKLQVDHIKPFS
MGGETSIQNSQTLCNICNKCKGKNEIDFRCNTTKLAIPKNLDLTFRTESQHSIRTLTRVVNLFYHCKAIYKIEWDSTIRG
YIIYLYPGNNPQWLLQHKAQLLEYIQDKLGRQAYNIVVTTKE
>Mature_842_residues
MVYVSLDLEQLREQDTNFVPKSPFQHQIEAFEKLSNTFRLDNKKPGSGILVLPTGAGKTFTAVRWLCDHVVPKNIKILWL
APSYYLLDQAFSTFKENARGISYSKKILNIRCVSSNPSHAKAASIKSTDDIIIMTVQTAISNLSPNALDGSGNKVKTPFR
KFIENCKETGLFIIVDEAHHSPAYGCRNLLIGEIGLRSIVPNSNILGLTATPTYTDKTRRGWLWKIYKDGVNGVIYQADK
EALIAQDILARPNYIEVSTGTEMVVDDRLYEKLVKQHKDLPESIIETLANDKHRNNLIVKTYTSNKDIYGKTIIFADRWF
QCVYIKDKLLEKGIKADAIYSHIDADPGSSEARNKRREDENKTILDEFRNNKLDVLINVRMLTEGADIPNVQSVFITRQT
TSSILMTQMIGRALRGKKIKGNSEANVVLFFDDWKRLIDWATPQIGDTKDTGKESTIKSYPLEYISIRLVEELSKSIESG
GVHEVIFSKIFPIGWYKTEIVYADSDKNNESIEAFTEYVMVYDHTQSKLNKFINFILDFKLPVEWSKEYLNDESLEQQIG
EWIDSWFDWKTDNLGDKLSADLIKIVRHIAQNQSAPEYYSFDERENYDLDRIAKRLIDFSPREIDKYINEEFAKPGTLWK
TFYKTPNRLITSVHLAIIKIIHGGDSEIPTITVISPSPHKDRELSEKEKVKVKKRDSYTCLCCGANTEAKLQVDHIKPFS
MGGETSIQNSQTLCNICNKCKGKNEIDFRCNTTKLAIPKNLDLTFRTESQHSIRTLTRVVNLFYHCKAIYKIEWDSTIRG
YIIYLYPGNNPQWLLQHKAQLLEYIQDKLGRQAYNIVVTTKE

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320539, Length=265, Percent_Identity=24.1509433962264, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96517; Mature: 96517

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYVSLDLEQLREQDTNFVPKSPFQHQIEAFEKLSNTFRLDNKKPGSGILVLPTGAGKTF
CEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCHH
TAVRWLCDHVVPKNIKILWLAPSYYLLDQAFSTFKENARGISYSKKILNIRCVSSNPSHA
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCC
KAASIKSTDDIIIMTVQTAISNLSPNALDGSGNKVKTPFRKFIENCKETGLFIIVDEAHH
HHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCC
SPAYGCRNLLIGEIGLRSIVPNSNILGLTATPTYTDKTRRGWLWKIYKDGVNGVIYQADK
CCCHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCC
EALIAQDILARPNYIEVSTGTEMVVDDRLYEKLVKQHKDLPESIIETLANDKHRNNLIVK
HHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEE
TYTSNKDIYGKTIIFADRWFQCVYIKDKLLEKGIKADAIYSHIDADPGSSEARNKRREDE
EECCCCCCCCEEEEEEECCEEEEEEHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCCC
NKTILDEFRNNKLDVLINVRMLTEGADIPNVQSVFITRQTTSSILMTQMIGRALRGKKIK
CCHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCEEC
GNSEANVVLFFDDWKRLIDWATPQIGDTKDTGKESTIKSYPLEYISIRLVEELSKSIESG
CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCC
GVHEVIFSKIFPIGWYKTEIVYADSDKNNESIEAFTEYVMVYDHTQSKLNKFINFILDFK
CHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHCC
LPVEWSKEYLNDESLEQQIGEWIDSWFDWKTDNLGDKLSADLIKIVRHIAQNQSAPEYYS
CCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
FDERENYDLDRIAKRLIDFSPREIDKYINEEFAKPGTLWKTFYKTPNRLITSVHLAIIKI
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHEE
IHGGDSEIPTITVISPSPHKDRELSEKEKVKVKKRDSYTCLCCGANTEAKLQVDHIKPFS
EECCCCCCCEEEEECCCCCCCCCCCHHHHEEEEECCCEEEEEECCCCCCEEEEECCCCCC
MGGETSIQNSQTLCNICNKCKGKNEIDFRCNTTKLAIPKNLDLTFRTESQHSIRTLTRVV
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCEEEECCCCHHHHHHHHHH
NLFYHCKAIYKIEWDSTIRGYIIYLYPGNNPQWLLQHKAQLLEYIQDKLGRQAYNIVVTT
HHHHHCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEE
KE
CC
>Mature Secondary Structure
MVYVSLDLEQLREQDTNFVPKSPFQHQIEAFEKLSNTFRLDNKKPGSGILVLPTGAGKTF
CEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCHH
TAVRWLCDHVVPKNIKILWLAPSYYLLDQAFSTFKENARGISYSKKILNIRCVSSNPSHA
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCC
KAASIKSTDDIIIMTVQTAISNLSPNALDGSGNKVKTPFRKFIENCKETGLFIIVDEAHH
HHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCC
SPAYGCRNLLIGEIGLRSIVPNSNILGLTATPTYTDKTRRGWLWKIYKDGVNGVIYQADK
CCCHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCC
EALIAQDILARPNYIEVSTGTEMVVDDRLYEKLVKQHKDLPESIIETLANDKHRNNLIVK
HHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEE
TYTSNKDIYGKTIIFADRWFQCVYIKDKLLEKGIKADAIYSHIDADPGSSEARNKRREDE
EECCCCCCCCEEEEEEECCEEEEEEHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCCC
NKTILDEFRNNKLDVLINVRMLTEGADIPNVQSVFITRQTTSSILMTQMIGRALRGKKIK
CCHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCEEC
GNSEANVVLFFDDWKRLIDWATPQIGDTKDTGKESTIKSYPLEYISIRLVEELSKSIESG
CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCC
GVHEVIFSKIFPIGWYKTEIVYADSDKNNESIEAFTEYVMVYDHTQSKLNKFINFILDFK
CHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHCC
LPVEWSKEYLNDESLEQQIGEWIDSWFDWKTDNLGDKLSADLIKIVRHIAQNQSAPEYYS
CCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
FDERENYDLDRIAKRLIDFSPREIDKYINEEFAKPGTLWKTFYKTPNRLITSVHLAIIKI
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHEE
IHGGDSEIPTITVISPSPHKDRELSEKEKVKVKKRDSYTCLCCGANTEAKLQVDHIKPFS
EECCCCCCCEEEEECCCCCCCCCCCHHHHEEEEECCCEEEEEECCCCCCEEEEECCCCCC
MGGETSIQNSQTLCNICNKCKGKNEIDFRCNTTKLAIPKNLDLTFRTESQHSIRTLTRVV
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCEEEECCCCHHHHHHHHHH
NLFYHCKAIYKIEWDSTIRGYIIYLYPGNNPQWLLQHKAQLLEYIQDKLGRQAYNIVVTT
HHHHHCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEE
KE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA