| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908342
Identifier: 75908342
GI number: 75908342
Start: 2622747
End: 2623289
Strand: Direct
Name: 75908342
Synonym: Ava_2123
Alternate gene names: NA
Gene position: 2622747-2623289 (Clockwise)
Preceding gene: 75908341
Following gene: 75908343
Centisome position: 41.2
GC content: 45.86
Gene sequence:
>543_bases ATGTCAAATCTGGTGAAACGCAAAGCCCGTACTAGTTCACTTAACCGCCGACCCCTGGGTTTAATTTTCATTATCCTGGT ATGGAGTCTGGCTATGGGTTGGTTACTAGCCTTGGCAACTAGCGCCCACAGTGCTACACCTACAGCAGAAATTGGCACTG TTGACGTAATTCCCCCAGGACAAAAACTGGGACAAGAACTGTATTTAGAAAATTGTGCTACTTGCCACATTGGTTTACCA CCGGCTGTTTTACCCAGTCAAACTTGGCGGAATCTTCTACAAGACTCACAGCATTATGGTGTACAAATCAAGCCTTTAAT AGATCCACCACGGACTTTGGTCTGGCGGTATCTTTCCACCTTTTCCCGTTCCCAGCTACCAGACGAAGAAACACCCTATC GCGTCAGAAATTCTCGTTATTTTAAAGCTCTACACCCTAAAGTTGATTTACCTCGACCTGTGCAGATCAATAGCTGTGTC AGTTGTCACCCTAGTGCAAGTCAGTATAATTTCCGTCGCCTGAGTGCAGAATGGGAGAAGTAG
Upstream 100 bases:
>100_bases ACGCTCACATTTGAAGATACTCGCTACCACTCATCACTGTCTTAGGTACGTCTTATGATAGAGCTACAAGTGCCACATCT ACGTATTTGGGAAGTGAGGA
Downstream 100 bases:
>100_bases GAGTGGATAACTAGCAGAGAATTTGAACTCAGAAACTCATTACTTCCCCATCGGATATTGCTACTTAGCGAGGATCGGCG TTCTCTGCCTCATCGGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSNLVKRKARTSSLNRRPLGLIFIILVWSLAMGWLLALATSAHSATPTAEIGTVDVIPPGQKLGQELYLENCATCHIGLP PAVLPSQTWRNLLQDSQHYGVQIKPLIDPPRTLVWRYLSTFSRSQLPDEETPYRVRNSRYFKALHPKVDLPRPVQINSCV SCHPSASQYNFRRLSAEWEK
Sequences:
>Translated_180_residues MSNLVKRKARTSSLNRRPLGLIFIILVWSLAMGWLLALATSAHSATPTAEIGTVDVIPPGQKLGQELYLENCATCHIGLP PAVLPSQTWRNLLQDSQHYGVQIKPLIDPPRTLVWRYLSTFSRSQLPDEETPYRVRNSRYFKALHPKVDLPRPVQINSCV SCHPSASQYNFRRLSAEWEK >Mature_179_residues SNLVKRKARTSSLNRRPLGLIFIILVWSLAMGWLLALATSAHSATPTAEIGTVDVIPPGQKLGQELYLENCATCHIGLPP AVLPSQTWRNLLQDSQHYGVQIKPLIDPPRTLVWRYLSTFSRSQLPDEETPYRVRNSRYFKALHPKVDLPRPVQINSCVS CHPSASQYNFRRLSAEWEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20402; Mature: 20271
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLVKRKARTSSLNRRPLGLIFIILVWSLAMGWLLALATSAHSATPTAEIGTVDVIPPG CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCH QKLGQELYLENCATCHIGLPPAVLPSQTWRNLLQDSQHYGVQIKPLIDPPRTLVWRYLST HHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHCHHHCCEEEEECCCCHHHHHHHHHHH FSRSQLPDEETPYRVRNSRYFKALHPKVDLPRPVQINSCVSCHPSASQYNFRRLSAEWEK HHHHCCCCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure SNLVKRKARTSSLNRRPLGLIFIILVWSLAMGWLLALATSAHSATPTAEIGTVDVIPPG CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCH QKLGQELYLENCATCHIGLPPAVLPSQTWRNLLQDSQHYGVQIKPLIDPPRTLVWRYLST HHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHCHHHCCEEEEECCCCHHHHHHHHHHH FSRSQLPDEETPYRVRNSRYFKALHPKVDLPRPVQINSCVSCHPSASQYNFRRLSAEWEK HHHHCCCCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA