Click here to switch to the map view.

The map label for this gene is ribF [H]

Identifier: 75908339

GI number: 75908339

Start: 2619659

End: 2620717

Strand: Direct

Name: ribF [H]

Synonym: Ava_2118

Alternate gene names: 75908339

Gene position: 2619659-2620717 (Clockwise)

Preceding gene: 75908338

Following gene: 75908340

Centisome position: 41.15

GC content: 44.38

Gene sequence:

>1059_bases
GTGTGGGTTGCTTCTACAACTGAAATGGTTCTCACGCCAACGGCTGTTGCTCTTGGTAAGTTTGATGGAGTGCATCTTGG
CCATCAAAGGGTCATTCAACCAGTTTTGCAGTCAACTAGGAGCGCACAAACATGGGGAGATGCACTAGACTCATCAGCCC
AATCAGCGAACCCTCCAGCAGCACCACAAGAACGGATATACTCCACAGTTGTCACTTTTCGTCCTCATCCCCAAGAGTTT
TTTACAGGACAAGCCCGTACTTGGTTAACTCCTCTAGATGAAAAAGTACAACAATTGCGATCGCTTGGGGTAGATCAACT
AGTACTACTACCCTTTGACAAAGAATTAACTGCCTTGTCACCGGAAGAGTTTGTCGAAAAAATTCTTGTGCAACAACTAC
GCTGTCAACGAATTAGCGTCGGGCAAGATTTTTGTTTTGGCAAACAACGCCGTGGTACTGCCAGGGACTTGCAGTTAATT
GCAGCCAAATACCATATCCCTGTTAGCATAGTTCCTTTACAAACTTCTGATGGGCAGTTTCTTGAAGACGGCAACTGTGG
TAGCTTTGAGTCTCTAGAATATGCTCCTATTAGTACTTCATTAATTCGCCAAGCTCTAGAAACCGGTGATATCAAAACTG
CCAATCAATTCTTAGGAAGACCCTACATTCTCATGGGCGTAGTCGTTGAAGGCGAACAACTTGGTAGAACCATTGGTTTT
CCTACAGCCAACTTGGAACTACCAAAAGATAAATTTATCCCCCGTCAAGGAGTTTACGCCGTCCGTGTCAAAATTCTCGG
TGAGAGCGCAGATGCTAATGTACCACCGGAAATTTTGGGGGTGATGAATATTGGCAACCGCCCCACAGTTAATGGTACTT
ATTCATCGGTAGAAGTGCATCTTCTAGATTGGTCTGGGGATTTATATGGCAAGGAAATAGTAGTGCAGTTAGTGGACTTT
CTGCGACCAGAACAAAAATTTCCCTCTCTAGAAGCCTTAAAAGCGCAAATTCAACAAGACTCCACTGTCGCTAGACAAAT
TTTGTCAAGGGAGAATTGA

Upstream 100 bases:

>100_bases
GCCAGAATCTACCTGTAAGGTATTATGCGACGAGCTGATAGTTAAATAAACCTCAAATCCCAAAATCCAAGTGCTAAATC
TGTCTCAAAATGGGTGTTCT

Downstream 100 bases:

>100_bases
GAATAGGGGTGTGGGAGTTTAGGGGTGTGGGGTTTTTGAACATCTACGCCCTAGTATTCTGAATATTTTTTATCTGGAAG
TTCCTTATGGGTAGGTTCCA

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MWVASTTEMVLTPTAVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPAAPQERIYSTVVTFRPHPQEF
FTGQARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTALSPEEFVEKILVQQLRCQRISVGQDFCFGKQRRGTARDLQLI
AAKYHIPVSIVPLQTSDGQFLEDGNCGSFESLEYAPISTSLIRQALETGDIKTANQFLGRPYILMGVVVEGEQLGRTIGF
PTANLELPKDKFIPRQGVYAVRVKILGESADANVPPEILGVMNIGNRPTVNGTYSSVEVHLLDWSGDLYGKEIVVQLVDF
LRPEQKFPSLEALKAQIQQDSTVARQILSREN

Sequences:

>Translated_352_residues
MWVASTTEMVLTPTAVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPAAPQERIYSTVVTFRPHPQEF
FTGQARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTALSPEEFVEKILVQQLRCQRISVGQDFCFGKQRRGTARDLQLI
AAKYHIPVSIVPLQTSDGQFLEDGNCGSFESLEYAPISTSLIRQALETGDIKTANQFLGRPYILMGVVVEGEQLGRTIGF
PTANLELPKDKFIPRQGVYAVRVKILGESADANVPPEILGVMNIGNRPTVNGTYSSVEVHLLDWSGDLYGKEIVVQLVDF
LRPEQKFPSLEALKAQIQQDSTVARQILSREN
>Mature_352_residues
MWVASTTEMVLTPTAVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPAAPQERIYSTVVTFRPHPQEF
FTGQARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTALSPEEFVEKILVQQLRCQRISVGQDFCFGKQRRGTARDLQLI
AAKYHIPVSIVPLQTSDGQFLEDGNCGSFESLEYAPISTSLIRQALETGDIKTANQFLGRPYILMGVVVEGEQLGRTIGF
PTANLELPKDKFIPRQGVYAVRVKILGESADANVPPEILGVMNIGNRPTVNGTYSSVEVHLLDWSGDLYGKEIVVQLVDF
LRPEQKFPSLEALKAQIQQDSTVARQILSREN

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=335, Percent_Identity=37.910447761194, Blast_Score=193, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17541882, Length=131, Percent_Identity=35.1145038167939, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 38982; Mature: 38982

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVASTTEMVLTPTAVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPA
CCCCCCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC
APQERIYSTVVTFRPHPQEFFTGQARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTALS
CHHHHHHHHHEECCCCCHHHHCCCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PEEFVEKILVQQLRCQRISVGQDFCFGKQRRGTARDLQLIAAKYHIPVSIVPLQTSDGQF
HHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHEECCCEEEEEEECCCCCE
LEDGNCGSFESLEYAPISTSLIRQALETGDIKTANQFLGRPYILMGVVVEGEQLGRTIGF
EECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCEEEEEEEECHHHHCCCCCC
PTANLELPKDKFIPRQGVYAVRVKILGESADANVPPEILGVMNIGNRPTVNGTYSSVEVH
CCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEECCCCCCCCCCCCEEEEE
LLDWSGDLYGKEIVVQLVDFLRPEQKFPSLEALKAQIQQDSTVARQILSREN
EEECCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWVASTTEMVLTPTAVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPA
CCCCCCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC
APQERIYSTVVTFRPHPQEFFTGQARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTALS
CHHHHHHHHHEECCCCCHHHHCCCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PEEFVEKILVQQLRCQRISVGQDFCFGKQRRGTARDLQLIAAKYHIPVSIVPLQTSDGQF
HHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHEECCCEEEEEEECCCCCE
LEDGNCGSFESLEYAPISTSLIRQALETGDIKTANQFLGRPYILMGVVVEGEQLGRTIGF
EECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCEEEEEEEECHHHHCCCCCC
PTANLELPKDKFIPRQGVYAVRVKILGESADANVPPEILGVMNIGNRPTVNGTYSSVEVH
CCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEECCCCCCCCCCCCEEEEE
LLDWSGDLYGKEIVVQLVDFLRPEQKFPSLEALKAQIQQDSTVARQILSREN
EEECCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]