| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908277
Identifier: 75908277
GI number: 75908277
Start: 2544346
End: 2545878
Strand: Direct
Name: 75908277
Synonym: Ava_2056
Alternate gene names: NA
Gene position: 2544346-2545878 (Clockwise)
Preceding gene: 75908276
Following gene: 75908278
Centisome position: 39.97
GC content: 42.07
Gene sequence:
>1533_bases ATGACAGAAACGACTCTCCCACCCTTAATTCAGCAGATGTTACAACCAGGATTTTATCCTCATGAAGTAACAGAACCTAT TCAACTAATTCAGACTCATGTTTCTTCTGTGTTACTCACAGGAGAGTATGCCTATAAACTAAAAAAACCAGTGAATTTTG GCTTTTTGGATTTCTCCACTTTAGAAAAGCGACAACATTTTTGTCAGGAAGAACTGCGCTTGAATCAACGAGGAGCAGCT GAATTATATTTAGAAGTTTTACCAATCAGTTTGGTAGGTGAGCAATATACTCTAGGGGGAACTGGTGAGGCTGTCGAGTA TGTGCTGAAGATGCGCCAGTTTCCCCAGGATGGCTTATTCAGTGAACTTTTTGCCCAAGGTAAACTCACTGAGTCACACC TAGAAGAATTAGGCAAGGTCGTGGCTCAATACCATGCTAAAACTGAGACGAATGATTATATTCGCAGTTTTGGAGAAGTT CCTCAAGTGCAGGCTGCATTTGATGAAAATTATCAGCAAACTGAGAAATATATCGGTGGACCCCAAACACAGTTGCAATT TGACGAAACTAAAGCCTACACCGAGCGTTTTTTCGCAGAAAAACAAGAATTATTCCAGCGCCGAATCCAAAATAACTATA TTCGGGAATGTCATGGAGACTTACACCTGAGAAATATCTGTCTATGGCAAGATAAAATTCTTCTGTTTGATTGTATTGAA TTTAACGAACCTTTCCGCTTTGTTGATGTCATGTTCGATGTCGCCTATGCGGTGATGGATTTGGATGCACAGCAACGCCC AGACCTGAGTAACGCATATTTGAATACCTATCTAGAGCAGACTGGCGACTGGGAAGGGTTAGAAGTGCTACCCATATACT TAAATCGTCAATCTTATGTGCGAGCTAAAGTAACTTCATTTTTATTGGATGACCCCAGCGTCCCCGCGACGGTGAAGGAA GAAGCGACGAAAACAGCCTCTACATACTACAAACTGGCGTGGGAATATACCAAACCCAAACAAGGAAAACTTATCTTAAT GTCCGGGTTATCTGGTTCTGGGAAGAGTACGACTGCAAAATATTTAGCCCGTCAACTAGATGCAATTCAAATTCGCTCAG ATGCAGTCCGCAAACACTTGGGGGGAATTTCTCTGTGGGAACGTGGTGGTGATGACTTGTATACACCCGAAATGACCCAG AAAACCTATGCAAGGTTATTAAACTTGGGGACTATACTAGCTAATCAAGGTTACACAGTAATTTTGGATGCTAAATATGA TAAACAAAATTTACGCCAAGAGGCGATCGCTCAAGCCGAAAAACATCACCTCCCCCTCCAGATTATTCACTGCACAGCAC CCATAGAAGTTATACAAGAACGCCTAATAAAGCGTACAGGCGATATTGCCGATGCTACAGTTGATTTGTTATCTTCCCAA CTCCAGCAAACTGAACCCTTTACCGACCAAGAAAAACCTTACGTGCAAACTTGGGACACAACTCAACCACCACACGTAAT TGGTAATCGGTAA
Upstream 100 bases:
>100_bases AAATGCTTGTGAGTTCGACGTTGAGGCTTTTACTCTCCTAAAAAAAGTACCATAATCAAGGTTTCAGCATATCCTGAACT CAGGTTAATTTAAAATTTCT
Downstream 100 bases:
>100_bases TTTACCGAAAGCTTATTTATGGGGAAACAAGTGTAGGTTAAAAACGTTACCCCTACACCCCTACACCCCTACACCCCTAC ACCCCTAGTTCATTTATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTETTLPPLIQQMLQPGFYPHEVTEPIQLIQTHVSSVLLTGEYAYKLKKPVNFGFLDFSTLEKRQHFCQEELRLNQRGAA ELYLEVLPISLVGEQYTLGGTGEAVEYVLKMRQFPQDGLFSELFAQGKLTESHLEELGKVVAQYHAKTETNDYIRSFGEV PQVQAAFDENYQQTEKYIGGPQTQLQFDETKAYTERFFAEKQELFQRRIQNNYIRECHGDLHLRNICLWQDKILLFDCIE FNEPFRFVDVMFDVAYAVMDLDAQQRPDLSNAYLNTYLEQTGDWEGLEVLPIYLNRQSYVRAKVTSFLLDDPSVPATVKE EATKTASTYYKLAWEYTKPKQGKLILMSGLSGSGKSTTAKYLARQLDAIQIRSDAVRKHLGGISLWERGGDDLYTPEMTQ KTYARLLNLGTILANQGYTVILDAKYDKQNLRQEAIAQAEKHHLPLQIIHCTAPIEVIQERLIKRTGDIADATVDLLSSQ LQQTEPFTDQEKPYVQTWDTTQPPHVIGNR
Sequences:
>Translated_510_residues MTETTLPPLIQQMLQPGFYPHEVTEPIQLIQTHVSSVLLTGEYAYKLKKPVNFGFLDFSTLEKRQHFCQEELRLNQRGAA ELYLEVLPISLVGEQYTLGGTGEAVEYVLKMRQFPQDGLFSELFAQGKLTESHLEELGKVVAQYHAKTETNDYIRSFGEV PQVQAAFDENYQQTEKYIGGPQTQLQFDETKAYTERFFAEKQELFQRRIQNNYIRECHGDLHLRNICLWQDKILLFDCIE FNEPFRFVDVMFDVAYAVMDLDAQQRPDLSNAYLNTYLEQTGDWEGLEVLPIYLNRQSYVRAKVTSFLLDDPSVPATVKE EATKTASTYYKLAWEYTKPKQGKLILMSGLSGSGKSTTAKYLARQLDAIQIRSDAVRKHLGGISLWERGGDDLYTPEMTQ KTYARLLNLGTILANQGYTVILDAKYDKQNLRQEAIAQAEKHHLPLQIIHCTAPIEVIQERLIKRTGDIADATVDLLSSQ LQQTEPFTDQEKPYVQTWDTTQPPHVIGNR >Mature_509_residues TETTLPPLIQQMLQPGFYPHEVTEPIQLIQTHVSSVLLTGEYAYKLKKPVNFGFLDFSTLEKRQHFCQEELRLNQRGAAE LYLEVLPISLVGEQYTLGGTGEAVEYVLKMRQFPQDGLFSELFAQGKLTESHLEELGKVVAQYHAKTETNDYIRSFGEVP QVQAAFDENYQQTEKYIGGPQTQLQFDETKAYTERFFAEKQELFQRRIQNNYIRECHGDLHLRNICLWQDKILLFDCIEF NEPFRFVDVMFDVAYAVMDLDAQQRPDLSNAYLNTYLEQTGDWEGLEVLPIYLNRQSYVRAKVTSFLLDDPSVPATVKEE ATKTASTYYKLAWEYTKPKQGKLILMSGLSGSGKSTTAKYLARQLDAIQIRSDAVRKHLGGISLWERGGDDLYTPEMTQK TYARLLNLGTILANQGYTVILDAKYDKQNLRQEAIAQAEKHHLPLQIIHCTAPIEVIQERLIKRTGDIADATVDLLSSQL QQTEPFTDQEKPYVQTWDTTQPPHVIGNR
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 58508; Mature: 58377
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETTLPPLIQQMLQPGFYPHEVTEPIQLIQTHVSSVLLTGEYAYKLKKPVNFGFLDFST CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCCCCCHHH LEKRQHFCQEELRLNQRGAAELYLEVLPISLVGEQYTLGGTGEAVEYVLKMRQFPQDGLF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCHH SELFAQGKLTESHLEELGKVVAQYHAKTETNDYIRSFGEVPQVQAAFDENYQQTEKYIGG HHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC PQTQLQFDETKAYTERFFAEKQELFQRRIQNNYIRECHGDLHLRNICLWQDKILLFDCIE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCEEEECC FNEPFRFVDVMFDVAYAVMDLDAQQRPDLSNAYLNTYLEQTGDWEGLEVLPIYLNRQSYV CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHH RAKVTSFLLDDPSVPATVKEEATKTASTYYKLAWEYTKPKQGKLILMSGLSGSGKSTTAK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEECCCCCCCHHHHH YLARQLDAIQIRSDAVRKHLGGISLWERGGDDLYTPEMTQKTYARLLNLGTILANQGYTV HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE ILDAKYDKQNLRQEAIAQAEKHHLPLQIIHCTAPIEVIQERLIKRTGDIADATVDLLSSQ EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH LQQTEPFTDQEKPYVQTWDTTQPPHVIGNR HHHCCCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure TETTLPPLIQQMLQPGFYPHEVTEPIQLIQTHVSSVLLTGEYAYKLKKPVNFGFLDFST CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCCCCCHHH LEKRQHFCQEELRLNQRGAAELYLEVLPISLVGEQYTLGGTGEAVEYVLKMRQFPQDGLF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCHH SELFAQGKLTESHLEELGKVVAQYHAKTETNDYIRSFGEVPQVQAAFDENYQQTEKYIGG HHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC PQTQLQFDETKAYTERFFAEKQELFQRRIQNNYIRECHGDLHLRNICLWQDKILLFDCIE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCEEEECC FNEPFRFVDVMFDVAYAVMDLDAQQRPDLSNAYLNTYLEQTGDWEGLEVLPIYLNRQSYV CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHH RAKVTSFLLDDPSVPATVKEEATKTASTYYKLAWEYTKPKQGKLILMSGLSGSGKSTTAK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEECCCCCCCHHHHH YLARQLDAIQIRSDAVRKHLGGISLWERGGDDLYTPEMTQKTYARLLNLGTILANQGYTV HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE ILDAKYDKQNLRQEAIAQAEKHHLPLQIIHCTAPIEVIQERLIKRTGDIADATVDLLSSQ EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH LQQTEPFTDQEKPYVQTWDTTQPPHVIGNR HHHCCCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]