Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908254

Identifier: 75908254

GI number: 75908254

Start: 2515982

End: 2516368

Strand: Direct

Name: 75908254

Synonym: Ava_2033

Alternate gene names: NA

Gene position: 2515982-2516368 (Clockwise)

Preceding gene: 75908252

Following gene: 75908257

Centisome position: 39.52

GC content: 29.46

Gene sequence:

>387_bases
ATGTTCACTGAGGTAATAAATCAACACAAGATAACGGCAAATAATCACATTCGGTCTGTGAATATAACTGAATCTCAACA
AAAAAACACTCAAACTAATAGTATAGATTTTCCAGATATAGCTGTTTCTTTAACTCCTGTTGGATTAGTTTTTAGTTGGG
TAATTTTTTTTATAATTTTACGAAAAATCCGTTCTATCATAGAAAATAAGATGGTTTTTACAGTGAAAGGGTTACATCAA
TTACCTTGTAAAAACTGCCAATATTATTGCAATAATCATTATCTTAAATGTGCAGTACAGCCCTCCATTGTACTCACAGA
TGAAGCAAAAAACTGTTCTGAATATTTACCCAAAAACGACAAATTTGATTCCAAACATTTTTTTTAA

Upstream 100 bases:

>100_bases
TATGTTATGTGATACAACCATCAATCTTTTTGTGTCCACAGTACCAAATAAATACCAAATAAAACCCAAATTAGCAAATA
TATAAATAAGGTTAAATAAT

Downstream 100 bases:

>100_bases
TAGCTTCTGATAATTACAGAAGATATAAGAAAAAGGTAATAGATAATATAACAATTACCCATTACCAAATTATCATACCT
TTTAGGTGATGATTTTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MFTEVINQHKITANNHIRSVNITESQQKNTQTNSIDFPDIAVSLTPVGLVFSWVIFFIILRKIRSIIENKMVFTVKGLHQ
LPCKNCQYYCNNHYLKCAVQPSIVLTDEAKNCSEYLPKNDKFDSKHFF

Sequences:

>Translated_128_residues
MFTEVINQHKITANNHIRSVNITESQQKNTQTNSIDFPDIAVSLTPVGLVFSWVIFFIILRKIRSIIENKMVFTVKGLHQ
LPCKNCQYYCNNHYLKCAVQPSIVLTDEAKNCSEYLPKNDKFDSKHFF
>Mature_128_residues
MFTEVINQHKITANNHIRSVNITESQQKNTQTNSIDFPDIAVSLTPVGLVFSWVIFFIILRKIRSIIENKMVFTVKGLHQ
LPCKNCQYYCNNHYLKCAVQPSIVLTDEAKNCSEYLPKNDKFDSKHFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14855; Mature: 14855

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTEVINQHKITANNHIRSVNITESQQKNTQTNSIDFPDIAVSLTPVGLVFSWVIFFIIL
CCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH
RKIRSIIENKMVFTVKGLHQLPCKNCQYYCNNHYLKCAVQPSIVLTDEAKNCSEYLPKND
HHHHHHHHCCEEEEECCHHHCCCCCCCEEECCCEEEEEECCCEEEECCCCCHHHHCCCCC
KFDSKHFF
CCCCCCCC
>Mature Secondary Structure
MFTEVINQHKITANNHIRSVNITESQQKNTQTNSIDFPDIAVSLTPVGLVFSWVIFFIIL
CCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH
RKIRSIIENKMVFTVKGLHQLPCKNCQYYCNNHYLKCAVQPSIVLTDEAKNCSEYLPKND
HHHHHHHHCCEEEEECCHHHCCCCCCCEEECCCEEEEEECCCEEEECCCCCHHHHCCCCC
KFDSKHFF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA