BacMap

Definition	Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession	NC_007413
Length	6,365,727

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The map label for this gene is cbpA [C]

Identifier: 75908243

GI number: 75908243

Start: 2503228

End: 2504229

Strand: Direct

Name: cbpA [C]

Synonym: Ava_2022

Alternate gene names: 75908243

Gene position: 2503228-2504229 (Clockwise)

Preceding gene: 75908242

Following gene: 75908246

Centisome position: 39.32

GC content: 46.71

Gene sequence:

>1002_bases
ATGGCTGCAACAGACTTCAAAGACTATTACGCGATTTTGGGAGTTAGTAAAACTGCCACTCCAGAGGAAATTAAACAAGC
TTTTCGCAAATTAGCCCGCAAATATCACCCTGATGTTAATCCAGGGAATAAACAGGCGGAAGCAAGCTTCAAGGAAGTTA
ACGAAGCCTACGAAGTTTTGTCAGATGCCGAAAAACGCCAAAAATACGATCAATTTGGACAATATTGGCGACAAGTAGGC
GAAGGCTTCCCTGGGGGTGGCGCTGGTGTCGATATGGGTGGAGTGGACTTCAGCCAATACGGCAATTTTGATGAATTTAT
TAATGAGTTGTTAGGGCGCTTTGGTGGTGCTGCGCCTCGTGGTGGGCGACAAGGTTACTCTTATCGCACTTCTGGTGGTA
GACCAGGAGGTGGTTTTGGCGGCTTTAATGACTTTGGATTTCAAGATGTAGGCACAGCAGGCGGTGGTCAAGATGCCGAA
GCTACCATCAGCCTCACTTTTGCTGAAGCTTTTGCTGGAGTTCAAAAGCGCTTTAATTTAGGTAACGAAACTATTGATGT
GCGAATTCCGGCTGGTACTAAACCCGGTACTCGCTTACGGGTCAGGGGTAAGGGTCAATTTAACCCCATGACACAACAAA
GAGGCGATTTATATTTAAAAGTAGAATTTCAGCCCCACTCATTTTTCCAAATTGAAGGGGATAACTTGGCCTGCGAAATT
CCCATTACTCCCGATGAAGCTGCGCTGGGAGCCTCCATTGATGTGCCTACACCCGATGGTTCTGTGAACGTTAAACTACC
TGCTGGTGTGCGTTCTGGTCAATCACTCCGTTTACGGGGCAAAGGCTGGCCTATAGCCAAAGGCGGACGGGGTGATCAGT
TTGTCAAAGTGGCTATTGTTCCACCAAAAGATATGAGCCAACAAGAGCGAGAATACTATGAAAAAATCCGGGCTATCCGC
AGTTACAATCCCCGGAGTCATTTACAACAAGTTAAGTTGTGA

Upstream 100 bases:

>100_bases
TTTAAAATCAGAATATTTATGCGTTGGCATTAGACCTAGCAAATTCTCAATTTCAAATCTTAGAAAAAAACTTAAAGAAA
TTTCTACAGGAGGCTGGTAG

Downstream 100 bases:

>100_bases
TATTCCGTTTTGCTAATTATTTATATCTAGGATTCGTACTTGATTTTTAAAACGTAGGGTGGGCATTGCCCATCGGCTCA
TGGTTTTAGTGGGCATTGCT

Product: heat shock protein DnaJ-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MAATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVLSDAEKRQKYDQFGQYWRQVG
EGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPRGGRQGYSYRTSGGRPGGGFGGFNDFGFQDVGTAGGGQDAE
ATISLTFAEAFAGVQKRFNLGNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIVPPKDMSQQEREYYEKIRAIR
SYNPRSHLQQVKL

Sequences:

>Translated_333_residues
MAATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVLSDAEKRQKYDQFGQYWRQVG
EGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPRGGRQGYSYRTSGGRPGGGFGGFNDFGFQDVGTAGGGQDAE
ATISLTFAEAFAGVQKRFNLGNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIVPPKDMSQQEREYYEKIRAIR
SYNPRSHLQQVKL
>Mature_332_residues
AATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVLSDAEKRQKYDQFGQYWRQVGE
GFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPRGGRQGYSYRTSGGRPGGGFGGFNDFGFQDVGTAGGGQDAEA
TISLTFAEAFAGVQKRFNLGNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEIP
ITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIVPPKDMSQQEREYYEKIRAIRS
YNPRSHLQQVKL

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=347, Percent_Identity=30.2593659942363, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI5453690, Length=345, Percent_Identity=27.536231884058, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI201862587, Length=356, Percent_Identity=29.7752808988764, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI201862518, Length=352, Percent_Identity=30.1136363636364, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI56549115, Length=352, Percent_Identity=30.1136363636364, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI205360840, Length=353, Percent_Identity=25.4957507082153, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI205360838, Length=352, Percent_Identity=25.5681818181818, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI21553335, Length=95, Percent_Identity=51.5789473684211, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=63.6363636363636, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=63.6363636363636, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI24308127, Length=74, Percent_Identity=54.0540540540541, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI39204547, Length=329, Percent_Identity=27.0516717325228, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI23503241, Length=85, Percent_Identity=54.1176470588235, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI9558755, Length=132, Percent_Identity=40.1515151515151, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI47777312, Length=68, Percent_Identity=60.2941176470588, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI45504382, Length=74, Percent_Identity=50, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI7706495, Length=68, Percent_Identity=51.4705882352941, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI88501736, Length=82, Percent_Identity=51.219512195122, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI27151736, Length=82, Percent_Identity=51.219512195122, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI194328758, Length=66, Percent_Identity=59.0909090909091, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194328760, Length=66, Percent_Identity=59.0909090909091, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194306642, Length=147, Percent_Identity=39.4557823129252, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194306640, Length=147, Percent_Identity=39.4557823129252, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4504511, Length=66, Percent_Identity=56.0606060606061, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI29126218, Length=74, Percent_Identity=48.6486486486487, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI56687498, Length=75, Percent_Identity=52, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI27735107, Length=80, Percent_Identity=45, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI5031741, Length=74, Percent_Identity=50, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI72534740, Length=165, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI22749377, Length=69, Percent_Identity=50.7246376811594, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1787235, Length=338, Percent_Identity=33.7278106508876, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1786197, Length=382, Percent_Identity=29.8429319371728, Blast_Score=125, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17534355, Length=340, Percent_Identity=32.0588235294118, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17554644, Length=89, Percent_Identity=50.561797752809, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI212645553, Length=68, Percent_Identity=50, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17553096, Length=64, Percent_Identity=56.25, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17553098, Length=64, Percent_Identity=56.25, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115532378, Length=81, Percent_Identity=46.9135802469136, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17554900, Length=145, Percent_Identity=29.6551724137931, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=52.3809523809524, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17568643, Length=75, Percent_Identity=46.6666666666667, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115532476, Length=74, Percent_Identity=43.2432432432432, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17538236, Length=67, Percent_Identity=49.2537313432836, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323870, Length=67, Percent_Identity=59.7014925373134, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324265, Length=66, Percent_Identity=62.1212121212121, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323119, Length=206, Percent_Identity=30.0970873786408, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6323813, Length=123, Percent_Identity=43.0894308943089, Blast_Score=76, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6320888, Length=135, Percent_Identity=37.7777777777778, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322194, Length=80, Percent_Identity=45, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322388, Length=108, Percent_Identity=39.8148148148148, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=166, Percent_Identity=24.6987951807229, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI85726398, Length=353, Percent_Identity=29.4617563739377, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24658562, Length=328, Percent_Identity=30.1829268292683, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24658555, Length=328, Percent_Identity=30.1829268292683, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45549272, Length=363, Percent_Identity=30.5785123966942, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45552811, Length=363, Percent_Identity=30.5785123966942, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI45552813, Length=363, Percent_Identity=30.5785123966942, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19920464, Length=340, Percent_Identity=26.4705882352941, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI18858081, Length=338, Percent_Identity=28.698224852071, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24654066, Length=68, Percent_Identity=57.3529411764706, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24654070, Length=68, Percent_Identity=57.3529411764706, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24654068, Length=68, Percent_Identity=57.3529411764706, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24654072, Length=68, Percent_Identity=57.3529411764706, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24646562, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646560, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646558, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646556, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21357547, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17737735, Length=74, Percent_Identity=52.7027027027027, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24668523, Length=74, Percent_Identity=52.7027027027027, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28574723, Length=74, Percent_Identity=52.7027027027027, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=60.9375, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24668492, Length=68, Percent_Identity=51.4705882352941, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI20129487, Length=112, Percent_Identity=41.9642857142857, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584014, Length=112, Percent_Identity=41.9642857142857, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641698, Length=64, Percent_Identity=51.5625, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641696, Length=64, Percent_Identity=51.5625, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21358273, Length=67, Percent_Identity=56.7164179104478, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24651436, Length=74, Percent_Identity=43.2432432432432, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21358311, Length=74, Percent_Identity=43.2432432432432, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24651439, Length=74, Percent_Identity=43.2432432432432, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584630, Length=69, Percent_Identity=49.2753623188406, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17648033, Length=69, Percent_Identity=49.2753623188406, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 36383; Mature: 36252

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVL
CCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
SDAEKRQKYDQFGQYWRQVGEGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCC
GGRQGYSYRTSGGRPGGGFGGFNDFGFQDVGTAGGGQDAEATISLTFAEAFAGVQKRFNL
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC
GNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEE
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIV
CCCCCHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
PPKDMSQQEREYYEKIRAIRSYNPRSHLQQVKL
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure 
AATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVL
CCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
SDAEKRQKYDQFGQYWRQVGEGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCC
GGRQGYSYRTSGGRPGGGFGGFNDFGFQDVGTAGGGQDAEATISLTFAEAFAGVQKRFNL
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC
GNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEE
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIV
CCCCCHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
PPKDMSQQEREYYEKIRAIRSYNPRSHLQQVKL
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]