| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908219
Identifier: 75908219
GI number: 75908219
Start: 2481259
End: 2482353
Strand: Direct
Name: 75908219
Synonym: Ava_1998
Alternate gene names: NA
Gene position: 2481259-2482353 (Clockwise)
Preceding gene: 75908218
Following gene: 75908220
Centisome position: 38.98
GC content: 44.2
Gene sequence:
>1095_bases GTGCCAAAATCTGCTAAATATTTGCTGATTGGCTCGACTGAGACTTATAGCGGTAAGTCCGCAACAGTTCTGGGATTGTC TCATCAGTTACAGCAAAAAGGATTAGATATTGCTTACGGCAAACCATTAGGCAATAGTTTGAGTACATCTGAAGGTACTT TAGTTGAAGAAGATGTCCAGTTTATTACCCATAGTCTCAATTTATCGGCAAATCGTATTGCTCCCACAATATTGGCTTTA GATGAAGCCAGTATGCAGAAACGTCTATTTGGTGAAGACACAACTGATTATAGTCAGACTTTGGTGGAGCAGTATTTACA AGTTCCTCGTGGGGATTTAGTTGTGCTAGAAGGCCCTGGGGATTTAGCAGAAGGTTATCTGTTTGATTTGTCTTTACTGC AAGTAGCAGACGTTTTGGATGCGTCTGTACTATTGGTGAGTCGTTACAGTTCGCTAATTTCTGTGGAATCGCTATTATCG GCTAAACAACGTGTAGGCGATCGCTTGATTGGTGTTGTGATCAATGATATCCCGCCTGCCCAGTTAGAAACTGTTGAGAA TTTTGTCCGTCCTTATCTAGAACAGCAAGGTATTGCCGTAATGGCGATGCTGCCCAAAAATGATTTACTCCGTAGTGTCA GCGTGGGTGAATTGGTCAAACAACTCAACGCCGAAGTTCTCTGTCGTAGCGATCGCCTAGATTTGATGGTCGAGAGTTTA GCAATTGGGGCGATGAATGTAAATGCTGCGGTGAAGTATTTCCGCAAGCGTCGGAATATGGCGGTAGTGACAGGCGGCGA TCGCGTGGAAATTCAGCAAGCAGCCTTAGAAACCTCTACTCAATGCCTCATCCTTACCGGACAATTACCCCCTCCACAAT TTATCCTCAGTCGTGCTGAAGAGTTAGAAATTCCCATCTTATCCGTTGACTTAGATACCCTCACCACTGTAGAAATTGTT GACCGCACCTTCGGCCAAGTGCGTGTCCATGAGCCGATTAAAGTACAGTGTATTCGTCAGTTAATGGCTGAAAATTTTGA TAGCGATCGCCTGTTATCTAAACTAGGTTTAACGCCCGCTACAGCCTTACCTTAG
Upstream 100 bases:
>100_bases AAATTACCTTGTGAGAACGTCTGAGGTTTCTGCCGGAACCAACTAAAATTAGTAAACACCTGGCTGGGTTTTACTGCCTT TTGAAATTAGGAGTGCGTGT
Downstream 100 bases:
>100_bases ATTTCCAACCTCTTCACACACAAATCTTTTGATACAAAATGAAAAACTTTACGACTCAAATTCGCTTCCTACTTACACGC TCTTTGGTAGAATAGCTTGG
Product: DRTGG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPKSAKYLLIGSTETYSGKSATVLGLSHQLQQKGLDIAYGKPLGNSLSTSEGTLVEEDVQFITHSLNLSANRIAPTILAL DEASMQKRLFGEDTTDYSQTLVEQYLQVPRGDLVVLEGPGDLAEGYLFDLSLLQVADVLDASVLLVSRYSSLISVESLLS AKQRVGDRLIGVVINDIPPAQLETVENFVRPYLEQQGIAVMAMLPKNDLLRSVSVGELVKQLNAEVLCRSDRLDLMVESL AIGAMNVNAAVKYFRKRRNMAVVTGGDRVEIQQAALETSTQCLILTGQLPPPQFILSRAEELEIPILSVDLDTLTTVEIV DRTFGQVRVHEPIKVQCIRQLMAENFDSDRLLSKLGLTPATALP
Sequences:
>Translated_364_residues MPKSAKYLLIGSTETYSGKSATVLGLSHQLQQKGLDIAYGKPLGNSLSTSEGTLVEEDVQFITHSLNLSANRIAPTILAL DEASMQKRLFGEDTTDYSQTLVEQYLQVPRGDLVVLEGPGDLAEGYLFDLSLLQVADVLDASVLLVSRYSSLISVESLLS AKQRVGDRLIGVVINDIPPAQLETVENFVRPYLEQQGIAVMAMLPKNDLLRSVSVGELVKQLNAEVLCRSDRLDLMVESL AIGAMNVNAAVKYFRKRRNMAVVTGGDRVEIQQAALETSTQCLILTGQLPPPQFILSRAEELEIPILSVDLDTLTTVEIV DRTFGQVRVHEPIKVQCIRQLMAENFDSDRLLSKLGLTPATALP >Mature_363_residues PKSAKYLLIGSTETYSGKSATVLGLSHQLQQKGLDIAYGKPLGNSLSTSEGTLVEEDVQFITHSLNLSANRIAPTILALD EASMQKRLFGEDTTDYSQTLVEQYLQVPRGDLVVLEGPGDLAEGYLFDLSLLQVADVLDASVLLVSRYSSLISVESLLSA KQRVGDRLIGVVINDIPPAQLETVENFVRPYLEQQGIAVMAMLPKNDLLRSVSVGELVKQLNAEVLCRSDRLDLMVESLA IGAMNVNAAVKYFRKRRNMAVVTGGDRVEIQQAALETSTQCLILTGQLPPPQFILSRAEELEIPILSVDLDTLTTVEIVD RTFGQVRVHEPIKVQCIRQLMAENFDSDRLLSKLGLTPATALP
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 39821; Mature: 39690
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSAKYLLIGSTETYSGKSATVLGLSHQLQQKGLDIAYGKPLGNSLSTSEGTLVEEDVQ CCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHH FITHSLNLSANRIAPTILALDEASMQKRLFGEDTTDYSQTLVEQYLQVPRGDLVVLEGPG HHHHHCCCCCHHHCCEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC DLAEGYLFDLSLLQVADVLDASVLLVSRYSSLISVESLLSAKQRVGDRLIGVVINDIPPA CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCH QLETVENFVRPYLEQQGIAVMAMLPKNDLLRSVSVGELVKQLNAEVLCRSDRLDLMVESL HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHHHHHCCHHHEECCCHHHHHHHHH AIGAMNVNAAVKYFRKRRNMAVVTGGDRVEIQQAALETSTQCLILTGQLPPPQFILSRAE HHCCCCHHHHHHHHHHHCCEEEEECCCCEEHHHHHHCCCCEEEEEECCCCCHHHHHCCHH ELEIPILSVDLDTLTTVEIVDRTFGQVRVHEPIKVQCIRQLMAENFDSDRLLSKLGLTPA HCCCCEEEECCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCC TALP CCCC >Mature Secondary Structure PKSAKYLLIGSTETYSGKSATVLGLSHQLQQKGLDIAYGKPLGNSLSTSEGTLVEEDVQ CCCCCEEEEECCCCCCCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHH FITHSLNLSANRIAPTILALDEASMQKRLFGEDTTDYSQTLVEQYLQVPRGDLVVLEGPG HHHHHCCCCCHHHCCEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC DLAEGYLFDLSLLQVADVLDASVLLVSRYSSLISVESLLSAKQRVGDRLIGVVINDIPPA CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCH QLETVENFVRPYLEQQGIAVMAMLPKNDLLRSVSVGELVKQLNAEVLCRSDRLDLMVESL HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHHHHHCCHHHEECCCHHHHHHHHH AIGAMNVNAAVKYFRKRRNMAVVTGGDRVEIQQAALETSTQCLILTGQLPPPQFILSRAE HHCCCCHHHHHHHHHHHCCEEEEECCCCEEHHHHHHCCCCEEEEEECCCCCHHHHHCCHH ELEIPILSVDLDTLTTVEIVDRTFGQVRVHEPIKVQCIRQLMAENFDSDRLLSKLGLTPA HCCCCEEEECCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCC TALP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]