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The map label for this gene is rsmI [H]

Identifier: 75908208

GI number: 75908208

Start: 2467743

End: 2468600

Strand: Direct

Name: rsmI [H]

Synonym: Ava_1987

Alternate gene names: 75908208

Gene position: 2467743-2468600 (Clockwise)

Preceding gene: 75908201

Following gene: 75908210

Centisome position: 38.77

GC content: 44.52

Gene sequence:

>858_bases
ATGCAGACTGAACCCAAACCAGGCGCACTATATATAGTTGGTACACCGATTGGTAATTTGGAGGATATCACCTTTCGGGC
GGTGCGGATATTGCAAAATGTGGATTTGATTGCGGCGGAAGATACGCGCCACACAGGGAAATTACTCCAACATTTGCAAG
TAAAAACACCACAAGTTAGTTACCATGAGCATAATCGTAGTAGTCGCATCCCAGAATTATTAGAGCATTTGCATAGTGGT
AAAGCGATCGCTCTAGTCAGTGATGCAGGTATGCCGGGAATTTCTGATCCTGGTTATGAACTGGTGAAAGCCTGTGTTGA
GGTAGCCATTCCAGTAGTTCCCATTCCTGGTGCGAGTGCGGCAATTACAGCCTTGAGTGCGGCGGGACTACCAACAGATA
AGTTTGTATTTGAGGGTTTTTTGCCAGCTAAAGGTCAACAAAGACGAGAACATTTAGAGGCTTTACAAACAGAATCCCGT
ACTTTAATTTTCTACGAATCGCCCCACCGTCTGCGGGAAACTTTACAAGATTTAGCAGAGGTTTGGGGAAGCGATCGCCA
AATAGTCCTGGCAAGGGAGTTGACTAAATTATATGAGGAATTTTGGCGAGGGAGTATTGAGGAAGCGATCGCCCATTATC
AACAAAAGGAACCCCAAGGTGAATATACGCTTTTGGTAGCGGGAAACCCACCCAGCCAAACCCTATTAACAGAAGAACAA
CTCAAAGCTGAATTACAACAATTAATCAGTCAAGGAATATCGCGATCGCAAGCTAGCCGTCAACTAGCAAAATACACTTC
CCTCAACCGTCGCCAAGTCTATCAAATTGCTCTTTCTATAGTTATGAATCCTGAATAG

Upstream 100 bases:

>100_bases
TGTCATTTGTTAGAGACGCGATTAATCGCGTCTGTACAATTTTCAGAAACGCGATTAATCGCGTCTGTACTAAATATTTA
TTGAATTTTGAATTGATTAA

Downstream 100 bases:

>100_bases
TTAAGTAAAAGGCAGAAAGGAAAAAAACTTGTTCACTAAGAAAAAGAACGCAGCGATCGCTTGAGGGCGAAGCTGCGAGA
ATTAAATACAGATACAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQTEPKPGALYIVGTPIGNLEDITFRAVRILQNVDLIAAEDTRHTGKLLQHLQVKTPQVSYHEHNRSSRIPELLEHLHSG
KAIALVSDAGMPGISDPGYELVKACVEVAIPVVPIPGASAAITALSAAGLPTDKFVFEGFLPAKGQQRREHLEALQTESR
TLIFYESPHRLRETLQDLAEVWGSDRQIVLARELTKLYEEFWRGSIEEAIAHYQQKEPQGEYTLLVAGNPPSQTLLTEEQ
LKAELQQLISQGISRSQASRQLAKYTSLNRRQVYQIALSIVMNPE

Sequences:

>Translated_285_residues
MQTEPKPGALYIVGTPIGNLEDITFRAVRILQNVDLIAAEDTRHTGKLLQHLQVKTPQVSYHEHNRSSRIPELLEHLHSG
KAIALVSDAGMPGISDPGYELVKACVEVAIPVVPIPGASAAITALSAAGLPTDKFVFEGFLPAKGQQRREHLEALQTESR
TLIFYESPHRLRETLQDLAEVWGSDRQIVLARELTKLYEEFWRGSIEEAIAHYQQKEPQGEYTLLVAGNPPSQTLLTEEQ
LKAELQQLISQGISRSQASRQLAKYTSLNRRQVYQIALSIVMNPE
>Mature_285_residues
MQTEPKPGALYIVGTPIGNLEDITFRAVRILQNVDLIAAEDTRHTGKLLQHLQVKTPQVSYHEHNRSSRIPELLEHLHSG
KAIALVSDAGMPGISDPGYELVKACVEVAIPVVPIPGASAAITALSAAGLPTDKFVFEGFLPAKGQQRREHLEALQTESR
TLIFYESPHRLRETLQDLAEVWGSDRQIVLARELTKLYEEFWRGSIEEAIAHYQQKEPQGEYTLLVAGNPPSQTLLTEEQ
LKAELQQLISQGISRSQASRQLAKYTSLNRRQVYQIALSIVMNPE

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=246, Percent_Identity=53.6585365853659, Blast_Score=247, Evalue=8e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31744; Mature: 31744

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTEPKPGALYIVGTPIGNLEDITFRAVRILQNVDLIAAEDTRHTGKLLQHLQVKTPQVS
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCC
YHEHNRSSRIPELLEHLHSGKAIALVSDAGMPGISDPGYELVKACVEVAIPVVPIPGASA
HHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEECCCCHH
AITALSAAGLPTDKFVFEGFLPAKGQQRREHLEALQTESRTLIFYESPHRLRETLQDLAE
HHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
VWGSDRQIVLARELTKLYEEFWRGSIEEAIAHYQQKEPQGEYTLLVAGNPPSQTLLTEEQ
HCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHH
LKAELQQLISQGISRSQASRQLAKYTSLNRRQVYQIALSIVMNPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTEPKPGALYIVGTPIGNLEDITFRAVRILQNVDLIAAEDTRHTGKLLQHLQVKTPQVS
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCC
YHEHNRSSRIPELLEHLHSGKAIALVSDAGMPGISDPGYELVKACVEVAIPVVPIPGASA
HHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEECCCCHH
AITALSAAGLPTDKFVFEGFLPAKGQQRREHLEALQTESRTLIFYESPHRLRETLQDLAE
HHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
VWGSDRQIVLARELTKLYEEFWRGSIEEAIAHYQQKEPQGEYTLLVAGNPPSQTLLTEEQ
HCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHH
LKAELQQLISQGISRSQASRQLAKYTSLNRRQVYQIALSIVMNPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]