| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908200
Identifier: 75908200
GI number: 75908200
Start: 2453669
End: 2454556
Strand: Direct
Name: 75908200
Synonym: Ava_1979
Alternate gene names: NA
Gene position: 2453669-2454556 (Clockwise)
Preceding gene: 75908199
Following gene: 75908201
Centisome position: 38.54
GC content: 38.63
Gene sequence:
>888_bases GTGAGCAAAACTATCTTTGAGTTGGTTGATCAACTACCAACTAGTGGTTTAACTATATCTATGCTAAATGCTTTAGATTT TGTTGCTCCTGGTGAGTGGCAAAATACTGTTGGTTTTGTGAATACCATTAAGACTGTTACTGGTGAAACTGACGAAGGCT TAATTCAGCAAATTGGTGAACGAGCAATTTATCTCTTTAATGATCGCTCCCAAGGATATCAAACTGCATTATGGCTCTAT CAAACTGTTGATAATACAGATAAAGCCTTGGGTGCGGCTGCTTTAGCTAACAAAGTCGGTGAAAAGTTACCCCTGTTGGG TTTCCTCAACTCAGTTACGCCCAAACCAGACAAAGCCCAAACTATAGATTTATCTCTGAAATTGGTGGCTGAACTAGTCG CTTTTTGCCAAATTAACGGTATTCCTGGGGATAGTATCGGCGATTTTGTTAGCTCACTTGGTGAGTATAGTGGTGAGTCA CTAATTCGCATGGTAGCTTTAGTTTGTGTTGATGGTTTAATACCTTTAGGCCCAGATTTTATTAGTAGGGCTATATCTGC TTTAAGTCAAACTAATCCTCAAGAATTAGAGAAAAATTCCACTTTTCAAGGCATCAAGGATGTGATTCCTGGTGGAAATG CTGGTAGTAAACTCAACTTTATTGGTGAAAGTTTTGATTCAGTAAAAGGTTGGATGAACGGTTTAGTTAGTAGTCACAAT TTAAGCCCACAAAAAGTAGTTCACAATCTGAGTAACTTTGTGGAAATCGCTGATGATAAGCTAGATTATTTAGCTGCTTT TTTAGATGTAGCCACGAATTACTACGAACATACAGGAACACAAACCTTAGCAAGACGCTTGATTGAGCGAGCTGTAGCGG AGATTTAA
Upstream 100 bases:
>100_bases GTATTGTTTCTCTGCGTACCTCTGCGTTTAAGATTCAACCCTGAATTCGCTACCATTTGACCCAAAACAGATAATAAAAC CTGATAATTAGGAGATTGTT
Downstream 100 bases:
>100_bases GCTAAGAGGTAATAGCAAAAATTCTACCTTTGCTATTACCTGTTAAGTAACTCACTGAATATCTTCTTACATAATATAAG TAGGAAACACCAAAAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSKTIFELVDQLPTSGLTISMLNALDFVAPGEWQNTVGFVNTIKTVTGETDEGLIQQIGERAIYLFNDRSQGYQTALWLY QTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQTIDLSLKLVAELVAFCQINGIPGDSIGDFVSSLGEYSGES LIRMVALVCVDGLIPLGPDFISRAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFIGESFDSVKGWMNGLVSSHN LSPQKVVHNLSNFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI
Sequences:
>Translated_295_residues MSKTIFELVDQLPTSGLTISMLNALDFVAPGEWQNTVGFVNTIKTVTGETDEGLIQQIGERAIYLFNDRSQGYQTALWLY QTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQTIDLSLKLVAELVAFCQINGIPGDSIGDFVSSLGEYSGES LIRMVALVCVDGLIPLGPDFISRAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFIGESFDSVKGWMNGLVSSHN LSPQKVVHNLSNFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI >Mature_294_residues SKTIFELVDQLPTSGLTISMLNALDFVAPGEWQNTVGFVNTIKTVTGETDEGLIQQIGERAIYLFNDRSQGYQTALWLYQ TVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQTIDLSLKLVAELVAFCQINGIPGDSIGDFVSSLGEYSGESL IRMVALVCVDGLIPLGPDFISRAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFIGESFDSVKGWMNGLVSSHNL SPQKVVHNLSNFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31905; Mature: 31773
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTIFELVDQLPTSGLTISMLNALDFVAPGEWQNTVGFVNTIKTVTGETDEGLIQQIGE CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCH RAIYLFNDRSQGYQTALWLYQTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQ HEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCH TIDLSLKLVAELVAFCQINGIPGDSIGDFVSSLGEYSGESLIRMVALVCVDGLIPLGPDF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH ISRAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFIGESFDSVKGWMNGLVSSHN HHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC LSPQKVVHNLSNFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SKTIFELVDQLPTSGLTISMLNALDFVAPGEWQNTVGFVNTIKTVTGETDEGLIQQIGE CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCH RAIYLFNDRSQGYQTALWLYQTVDNTDKALGAAALANKVGEKLPLLGFLNSVTPKPDKAQ HEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCH TIDLSLKLVAELVAFCQINGIPGDSIGDFVSSLGEYSGESLIRMVALVCVDGLIPLGPDF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH ISRAISALSQTNPQELEKNSTFQGIKDVIPGGNAGSKLNFIGESFDSVKGWMNGLVSSHN HHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC LSPQKVVHNLSNFVEIADDKLDYLAAFLDVATNYYEHTGTQTLARRLIERAVAEI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA