| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is folE [H]
Identifier: 75908170
GI number: 75908170
Start: 2423498
End: 2424148
Strand: Direct
Name: folE [H]
Synonym: Ava_1949
Alternate gene names: 75908170
Gene position: 2423498-2424148 (Clockwise)
Preceding gene: 75908169
Following gene: 75908172
Centisome position: 38.07
GC content: 41.32
Gene sequence:
>651_bases ATGACTTTATCGATTCGTCCCGATACAGTTTCTGCTGCTCAGATGGTATCTTCTTTATCTACTCAGCAAACACCAACTGT CACAGAAGCAGAAATGGTACAGGCTGTGCGTACTTTACTAATTGGATTAGGAGAAAATCCTGACCGTGAAGGGTTGCTAG ATACTCCTAAGCGAGTGGTAAAAGCTTTGCAGTTTTTGACTAAGGGATACAATGAATCCTTAGATGAACTGTTAAATGGT GCAGTATTTACAGAAGATGCCAATGAAATGGTATTGATTCGGGATATCGACATTTTCAGTTCTTGTGAACATCATATTTT GCCAATTATTGGTCGCGCTCATGTTGCCTATATTCCCAATGGTAAGGTGATAGGATTATCTAAAATTGCGCGAGTTTGTG AGATGTACGCTCGACGTTTACAAGTACAGGAACGTCTGACGCTACAAATTGCTGATGCACTGCAAGGTTTACTCAAACCT CAAGGGGTAGCAGTGGTAGTAGAAGCAACTCATATGTGCATGGTGATGCGTGGTGTACAAAAGCCTGGTTCTTGGACTGT AACTAGTGCAATGCGTGGTGTATTTGCGGAAGATGCTCGCACTCGTGAAGAGTTTATGAATTTAGTACGACATAATGCTA ATTTTCACTAA
Upstream 100 bases:
>100_bases GATTAAGAAGTGTTAAGTAATCAAACGACTCGGTTAATAGATTTTTGTCAATCTCTAACTATTAACTAACTCACAATCTC TACCAATTAAACGAAATAAT
Downstream 100 bases:
>100_bases TACCGTTTCTTAATGAAGATGTGCTTTATTCTGGACTGTAGAGACCTTTACCTGGTGCAACTTCATAGAAAATGGGTATC AATAACCAAGATTTAGAGGA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I 2; GTP-CH-I 2 [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTLSIRPDTVSAAQMVSSLSTQQTPTVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALQFLTKGYNESLDELLNG AVFTEDANEMVLIRDIDIFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARVCEMYARRLQVQERLTLQIADALQGLLKP QGVAVVVEATHMCMVMRGVQKPGSWTVTSAMRGVFAEDARTREEFMNLVRHNANFH
Sequences:
>Translated_216_residues MTLSIRPDTVSAAQMVSSLSTQQTPTVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALQFLTKGYNESLDELLNG AVFTEDANEMVLIRDIDIFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARVCEMYARRLQVQERLTLQIADALQGLLKP QGVAVVVEATHMCMVMRGVQKPGSWTVTSAMRGVFAEDARTREEFMNLVRHNANFH >Mature_215_residues TLSIRPDTVSAAQMVSSLSTQQTPTVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALQFLTKGYNESLDELLNGA VFTEDANEMVLIRDIDIFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARVCEMYARRLQVQERLTLQIADALQGLLKPQ GVAVVVEATHMCMVMRGVQKPGSWTVTSAMRGVFAEDARTREEFMNLVRHNANFH
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=179, Percent_Identity=60.3351955307263, Blast_Score=239, Evalue=1e-63, Organism=Homo sapiens, GI4503949, Length=179, Percent_Identity=60.3351955307263, Blast_Score=239, Evalue=1e-63, Organism=Homo sapiens, GI66932970, Length=148, Percent_Identity=54.0540540540541, Blast_Score=181, Evalue=3e-46, Organism=Homo sapiens, GI66932972, Length=139, Percent_Identity=56.8345323741007, Blast_Score=181, Evalue=6e-46, Organism=Escherichia coli, GI1788476, Length=208, Percent_Identity=36.0576923076923, Blast_Score=124, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=58.4269662921348, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6321706, Length=176, Percent_Identity=61.3636363636364, Blast_Score=224, Evalue=6e-60, Organism=Drosophila melanogaster, GI24656782, Length=194, Percent_Identity=57.2164948453608, Blast_Score=224, Evalue=3e-59, Organism=Drosophila melanogaster, GI24656796, Length=194, Percent_Identity=57.2164948453608, Blast_Score=224, Evalue=4e-59, Organism=Drosophila melanogaster, GI24656791, Length=194, Percent_Identity=57.2164948453608, Blast_Score=224, Evalue=5e-59,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 23928; Mature: 23797
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSIRPDTVSAAQMVSSLSTQQTPTVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVV CEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH KALQFLTKGYNESLDELLNGAVFTEDANEMVLIRDIDIFSSCEHHILPIIGRAHVAYIPN HHHHHHHCCCCHHHHHHHCCCEEECCCCCEEEEEECHHHHCCCHHHHHHHCCCEEEECCC GKVIGLSKIARVCEMYARRLQVQERLTLQIADALQGLLKPQGVAVVVEATHMCMVMRGVQ CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCC KPGSWTVTSAMRGVFAEDARTREEFMNLVRHNANFH CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLSIRPDTVSAAQMVSSLSTQQTPTVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVV EEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH KALQFLTKGYNESLDELLNGAVFTEDANEMVLIRDIDIFSSCEHHILPIIGRAHVAYIPN HHHHHHHCCCCHHHHHHHCCCEEECCCCCEEEEEECHHHHCCCHHHHHHHCCCEEEECCC GKVIGLSKIARVCEMYARRLQVQERLTLQIADALQGLLKPQGVAVVVEATHMCMVMRGVQ CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCC KPGSWTVTSAMRGVFAEDARTREEFMNLVRHNANFH CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]