| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908106
Identifier: 75908106
GI number: 75908106
Start: 2338689
End: 2339357
Strand: Direct
Name: 75908106
Synonym: Ava_1885
Alternate gene names: NA
Gene position: 2338689-2339357 (Clockwise)
Preceding gene: 75908105
Following gene: 75908116
Centisome position: 36.74
GC content: 43.65
Gene sequence:
>669_bases ATGGTCATTTCTAAATCCAACTTTTTGAAGGGAGCAGTTGCAGCATTAGCGACTGTACCCGTAGTTGCTGCTGGTGTATT TACCTCTGCTGGTGCTGCTCAAGCTGCTCAGTTGGTTGGTGAATTCTCCTTTTCCAGTGATCCTACCGTTTCCGCGACCC TGACATCAAACTCTGTCTCATTCGTAGCGCCAAAAACATTCACTATCAATCAGAGTTTATCCACTGGTAATTTTACTGGT TTCACAAGTGGCACAATCAATAACATTACCAGCTTTAGTACTAACACAATCGTTAATCCTTTCCTAACTTTATTGGGTGG TGCTCTTAGTGGTAGTACTTTTATTGCAAATACTGCCTCATACGATATCAGACAAGCTGCTCCAAACTTAGTAGCCATCG ATATTACGACTATAGGAACATTTAAGAACGCTCTCACGAATGAAGAGTCCGATGGGGAAGGGGTTTTAACTTTACAAACA GGCGGTCGAGGACTGACAGCATTTGATGTTGAAACCCTTCTTACAGGAGGAGGTTCAGTTTCAACCACTTTTTCAGGCTT CTACTTTGGTACTCCAAGAGTTTCTACCCCTGAACCAGCTACCATGCTAGGACTTGGGCTAGTTGGTGTAGGTGTTGCTA TGTCTCGTCGTCGCAAGACTGTTGCTTAA
Upstream 100 bases:
>100_bases TATATTTACTGTGTAAAGTACGTGATCTAAGTCTTGCCCGTGTTTACTTAATACTCAAGACAATACTGACGTTTACCATC TTTTTTATTAGGAGCCTATG
Downstream 100 bases:
>100_bases ATGTTGCTTAAATAATGTCCTAAATTCAAAAAAGTTGCTTTTAAAAATAAAAAGCAACTTTTATATAATTCCCTGATCTA GCTTGAGTAATACAGTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MVISKSNFLKGAVAALATVPVVAAGVFTSAGAAQAAQLVGEFSFSSDPTVSATLTSNSVSFVAPKTFTINQSLSTGNFTG FTSGTINNITSFSTNTIVNPFLTLLGGALSGSTFIANTASYDIRQAAPNLVAIDITTIGTFKNALTNEESDGEGVLTLQT GGRGLTAFDVETLLTGGGSVSTTFSGFYFGTPRVSTPEPATMLGLGLVGVGVAMSRRRKTVA
Sequences:
>Translated_222_residues MVISKSNFLKGAVAALATVPVVAAGVFTSAGAAQAAQLVGEFSFSSDPTVSATLTSNSVSFVAPKTFTINQSLSTGNFTG FTSGTINNITSFSTNTIVNPFLTLLGGALSGSTFIANTASYDIRQAAPNLVAIDITTIGTFKNALTNEESDGEGVLTLQT GGRGLTAFDVETLLTGGGSVSTTFSGFYFGTPRVSTPEPATMLGLGLVGVGVAMSRRRKTVA >Mature_222_residues MVISKSNFLKGAVAALATVPVVAAGVFTSAGAAQAAQLVGEFSFSSDPTVSATLTSNSVSFVAPKTFTINQSLSTGNFTG FTSGTINNITSFSTNTIVNPFLTLLGGALSGSTFIANTASYDIRQAAPNLVAIDITTIGTFKNALTNEESDGEGVLTLQT GGRGLTAFDVETLLTGGGSVSTTFSGFYFGTPRVSTPEPATMLGLGLVGVGVAMSRRRKTVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22530; Mature: 22530
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVISKSNFLKGAVAALATVPVVAAGVFTSAGAAQAAQLVGEFSFSSDPTVSATLTSNSVS CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEE FVAPKTFTINQSLSTGNFTGFTSGTINNITSFSTNTIVNPFLTLLGGALSGSTFIANTAS EECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCC YDIRQAAPNLVAIDITTIGTFKNALTNEESDGEGVLTLQTGGRGLTAFDVETLLTGGGSV CHHHHCCCCEEEEEEEECHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCE STTFSGFYFGTPRVSTPEPATMLGLGLVGVGVAMSRRRKTVA EEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVISKSNFLKGAVAALATVPVVAAGVFTSAGAAQAAQLVGEFSFSSDPTVSATLTSNSVS CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEE FVAPKTFTINQSLSTGNFTGFTSGTINNITSFSTNTIVNPFLTLLGGALSGSTFIANTAS EECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCC YDIRQAAPNLVAIDITTIGTFKNALTNEESDGEGVLTLQTGGRGLTAFDVETLLTGGGSV CHHHHCCCCEEEEEEEECHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCE STTFSGFYFGTPRVSTPEPATMLGLGLVGVGVAMSRRRKTVA EEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA