| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908085
Identifier: 75908085
GI number: 75908085
Start: 2316462
End: 2316992
Strand: Direct
Name: 75908085
Synonym: Ava_1864
Alternate gene names: NA
Gene position: 2316462-2316992 (Clockwise)
Preceding gene: 75908084
Following gene: 75908094
Centisome position: 36.39
GC content: 40.3
Gene sequence:
>531_bases ATGAGTCTTATCAGGCTGTATCGCACCTCAATATTAGTAGTGAGTGTCTGCATTCTACTAGCTAGCAACTCTGCTTTAGC TGCTGAAAGAGTAGTACTGAAGTATAATGTTTTCCGTGAAACCATTGCTGTAGAAGAATTATCGACCTTTGCTCAAACTG GCGCACTTTCAAGTTCACTACGAATTAATTTAGCTTTAGCTCGACAAGACCCTAAAGTAATTCGTCAATATTTAACAACA CCAGTCAAAGTCAGCCCTGTACTTTTAGATCGGGTGTTAAACAGTCCTGTAGGTAACATTATTCTTGATGAGCTAAGTCA AGTTATTCATACACCATCCCGCAGTGCTGATAGACAAGCTTTGCGTTCCGCTTTGTCACTTTCCGCTAGTGGCGATGGAC AAATGACTTTGATAGAAATAATCCAAAATTATCCTACGCCCAACGTAGAAGTTGACGGAGAGCGTTTGGGAAATGCTTAC CGTCAACTTCGTAGCTTACAAGCTAGGTTAGAGAATTTATTCGGTTTTTAA
Upstream 100 bases:
>100_bases TCACGGGACAAACTCTCTTTGTAGACGCTGGTCTGACGCTTTACGCTGACTTTAGAGAACCTTGGTCAGCTTGATTTCCA AGTATAAAACTTCAGAAAAT
Downstream 100 bases:
>100_bases TAAGCTAAAGTTTCTAAAGTTTCCCGCAAATAACGTTGTACTTGCTGTTCTAAACGCAATTCTTTCAGTTGAATATTACT TTCTAGCTGCCAACGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSLIRLYRTSILVVSVCILLASNSALAAERVVLKYNVFRETIAVEELSTFAQTGALSSSLRINLALARQDPKVIRQYLTT PVKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQALRSALSLSASGDGQMTLIEIIQNYPTPNVEVDGERLGNAY RQLRSLQARLENLFGF
Sequences:
>Translated_176_residues MSLIRLYRTSILVVSVCILLASNSALAAERVVLKYNVFRETIAVEELSTFAQTGALSSSLRINLALARQDPKVIRQYLTT PVKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQALRSALSLSASGDGQMTLIEIIQNYPTPNVEVDGERLGNAY RQLRSLQARLENLFGF >Mature_175_residues SLIRLYRTSILVVSVCILLASNSALAAERVVLKYNVFRETIAVEELSTFAQTGALSSSLRINLALARQDPKVIRQYLTTP VKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQALRSALSLSASGDGQMTLIEIIQNYPTPNVEVDGERLGNAYR QLRSLQARLENLFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19395; Mature: 19264
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIRLYRTSILVVSVCILLASNSALAAERVVLKYNVFRETIAVEELSTFAQTGALSSSL CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RINLALARQDPKVIRQYLTTPVKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQA EEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH LRSALSLSASGDGQMTLIEIIQNYPTPNVEVDGERLGNAYRQLRSLQARLENLFGF HHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLIRLYRTSILVVSVCILLASNSALAAERVVLKYNVFRETIAVEELSTFAQTGALSSSL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RINLALARQDPKVIRQYLTTPVKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQA EEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH LRSALSLSASGDGQMTLIEIIQNYPTPNVEVDGERLGNAYRQLRSLQARLENLFGF HHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA