| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75907944
Identifier: 75907944
GI number: 75907944
Start: 2161399
End: 2161977
Strand: Direct
Name: 75907944
Synonym: Ava_1723
Alternate gene names: NA
Gene position: 2161399-2161977 (Clockwise)
Preceding gene: 75907941
Following gene: 75907945
Centisome position: 33.95
GC content: 45.6
Gene sequence:
>579_bases ATGTCACGAAACCCCGATGCTCCATCATCTTCTTCTAATCTCCGGACAATTGCCCAGACGTTCCGTATGACAGGCTGGAT TAGTTTCTGGATTCAGCTAGTACTAGGCGTTATTTCTGGCATCATTGTGCTATTGTTTGGCATTTTTAGCCAAAGGGCAG GTAGCCCTAATAATAATCCGGGGACTGGCTTTGGGGTGTTTTTAGCGATTTGTGGATTAGTAGTGCTGGGTGGAGGTATT TATTTAGCCTTCCGTTACACCAGAATTGGGAATCAATTGCTATCCTCCAACCCCAGTAATCGTCCTCGGAAAGTGGAAAC AGTGCAAGTATTACGTTTAGGACTGTGGATAAATTTAGGTGGGACTCTAGTGACATTGTTGGGAGCGCAGGCGATCGTGG GTACACTAGTAGCTAGGTCAATATCTCCCCAAGCTGTCACTACCCAATTATTTGACCCTACCCGCATCATTAGTGGTCTA GATATGTTGGTAGTTCAGGCGAACATCAATACAGTCTCAGCCCACTTTGCTGGGCTGGTTAGCTCATTGTGGCTACTCAA TCGCATCAACAAATCTTAA
Upstream 100 bases:
>100_bases ACAGTATGGCAGAAATAAAGATAGTATTTTAAGCAGCACACAGCCAAGATTGTGGATGTTTTATTTGCATTTTGTACTAG CCAGTTGGTGAGCAAGCAGT
Downstream 100 bases:
>100_bases ACAAGATTTTAGTATTTGCCTTTCCTGTCATGGCAAGACAAAATCGGTATATGCTGATGTGTTGGCAAGAAGATACTAGG CGAAAGATTGAGAAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSRNPDAPSSSSNLRTIAQTFRMTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGI YLAFRYTRIGNQLLSSNPSNRPRKVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGL DMLVVQANINTVSAHFAGLVSSLWLLNRINKS
Sequences:
>Translated_192_residues MSRNPDAPSSSSNLRTIAQTFRMTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGI YLAFRYTRIGNQLLSSNPSNRPRKVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGL DMLVVQANINTVSAHFAGLVSSLWLLNRINKS >Mature_191_residues SRNPDAPSSSSNLRTIAQTFRMTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNPGTGFGVFLAICGLVVLGGGIY LAFRYTRIGNQLLSSNPSNRPRKVETVQVLRLGLWINLGGTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGLD MLVVQANINTVSAHFAGLVSSLWLLNRINKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20580; Mature: 20449
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNPDAPSSSSNLRTIAQTFRMTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTGFGVFLAICGLVVLGGGIYLAFRYTRIGNQLLSSNPSNRPRKVETVQVLRLGLWINLG CCHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCH GTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGLDMLVVQANINTVSAHFAGLV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHHHHH SSLWLLNRINKS HHHHHHHHHCCC >Mature Secondary Structure SRNPDAPSSSSNLRTIAQTFRMTGWISFWIQLVLGVISGIIVLLFGIFSQRAGSPNNNP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTGFGVFLAICGLVVLGGGIYLAFRYTRIGNQLLSSNPSNRPRKVETVQVLRLGLWINLG CCHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCH GTLVTLLGAQAIVGTLVARSISPQAVTTQLFDPTRIISGLDMLVVQANINTVSAHFAGLV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHHHHH SSLWLLNRINKS HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA